RNA–Protein interactions for RNA: ENST00000548116.5

SMPDL3B-205, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

TSL 2

Gene SMPDL3B, Length 1,913 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-205ENST00000548116 EGFRP00533 1210 aa15.76■□□□□ 0.11
SMPDL3B-205ENST00000548116 MMP1P03956 469 aa15.76■□□□□ 0.11
SMPDL3B-205ENST00000548116 GMPSP49915 693 aaPredicted RBP15.76■□□□□ 0.11
SMPDL3B-205ENST00000548116 MMP14P50281 582 aa15.76■□□□□ 0.11
SMPDL3B-205ENST00000548116 EIF6P56537 245 aaKnown RBP15.76■□□□□ 0.11
SMPDL3B-205ENST00000548116 AKAP17AQ02040 695 aaKnown RBP15.76■□□□□ 0.11
SMPDL3B-205ENST00000548116 CAVIN1Q6NZI2 390 aaKnown RBP15.76■□□□□ 0.11
SMPDL3B-205ENST00000548116 CSRNP1Q96S65 589 aa15.76■□□□□ 0.11
SMPDL3B-205ENST00000548116 CFAP45Q9UL16 551 aa15.76■□□□□ 0.11
SMPDL3B-205ENST00000548116 TTLL1O95922 423 aa15.76■□□□□ 0.11
SMPDL3B-205ENST00000548116 GNAQP50148 359 aa15.76■□□□□ 0.11
SMPDL3B-205ENST00000548116 CERKLQ49MI3 558 aaPredicted RBP15.76■□□□□ 0.11
SMPDL3B-205ENST00000548116 MYSM1Q5VVJ2 828 aa15.76■□□□□ 0.11
SMPDL3B-205ENST00000548116 DPF2Q92785 391 aa15.76■□□□□ 0.11
SMPDL3B-205ENST00000548116 ZNF396Q96N95 335 aaPredicted RBP15.76■□□□□ 0.11
SMPDL3B-205ENST00000548116 VEZTQ9HBM0 779 aa15.76■□□□□ 0.11
SMPDL3B-205ENST00000548116 TMEM63CQ9P1W3 806 aa15.76■□□□□ 0.11
SMPDL3B-205ENST00000548116 PGAP2Q9UHJ9 254 aa15.76■□□□□ 0.11
SMPDL3B-205ENST00000548116 RCOR1Q9UKL0 485 aa15.76■□□□□ 0.11
SMPDL3B-205ENST00000548116 MTMR7Q9Y216 660 aa15.76■□□□□ 0.11
SMPDL3B-205ENST00000548116 DICER1Q9UPY3 1922 aaKnown RBP15.75■□□□□ 0.11
SMPDL3B-205ENST00000548116 UTRNP46939 3433 aa15.75■□□□□ 0.11
SMPDL3B-205ENST00000548116 MPHOSPH10O00566 681 aaKnown RBP15.75■□□□□ 0.11
SMPDL3B-205ENST00000548116 CYTH3O43739 400 aa15.75■□□□□ 0.11
SMPDL3B-205ENST00000548116 VEGFAP15692 232 aaPredicted RBP15.75■□□□□ 0.11
SMPDL3B-205ENST00000548116 RRP1BQ14684 758 aaKnown RBP15.75■□□□□ 0.11
SMPDL3B-205ENST00000548116 ARHGAP27Q6ZUM4 889 aa15.75■□□□□ 0.11
SMPDL3B-205ENST00000548116 FAM83AQ86UY5 434 aa15.75■□□□□ 0.11
SMPDL3B-205ENST00000548116 VPS54Q9P1Q0 977 aa15.75■□□□□ 0.11
SMPDL3B-205ENST00000548116 CLIP2Q9UDT6 1046 aa15.75■□□□□ 0.11
SMPDL3B-205ENST00000548116 SBF1O95248 1867 aa15.75■□□□□ 0.11
SMPDL3B-205ENST00000548116 MYH4Q9Y623 1939 aa15.74■□□□□ 0.11
SMPDL3B-205ENST00000548116 USP17L5A8MUK1 530 aa15.74■□□□□ 0.11
SMPDL3B-205ENST00000548116 GOLGA8HP0CJ92 632 aa15.74■□□□□ 0.11
SMPDL3B-205ENST00000548116 SNHG28P0DPA3 235 aa15.74■□□□□ 0.11
SMPDL3B-205ENST00000548116 JAG1P78504 1218 aa15.74■□□□□ 0.11
SMPDL3B-205ENST00000548116 CEBPZQ03701 1054 aaKnown RBP15.74■□□□□ 0.11
SMPDL3B-205ENST00000548116 PFKFB3Q16875 520 aaPredicted RBP15.74■□□□□ 0.11
SMPDL3B-205ENST00000548116 USP17L2Q6R6M4 530 aa15.74■□□□□ 0.11
SMPDL3B-205ENST00000548116 CDAN1Q8IWY9 1227 aa15.74■□□□□ 0.11
SMPDL3B-205ENST00000548116 MICALL2Q8IY33 904 aa15.74■□□□□ 0.11
SMPDL3B-205ENST00000548116 LRRC47Q8N1G4 583 aaKnown RBP15.74■□□□□ 0.11
SMPDL3B-205ENST00000548116 PGBD1Q96JS3 809 aa15.74■□□□□ 0.11
SMPDL3B-205ENST00000548116 SYT17Q9BSW7 474 aa15.74■□□□□ 0.11
SMPDL3B-205ENST00000548116 PHF20Q9BVI0 1012 aa15.74■□□□□ 0.11
SMPDL3B-205ENST00000548116 TRIM34Q9BYJ4 488 aa15.74■□□□□ 0.11
SMPDL3B-205ENST00000548116 TMEM39BQ9GZU3 492 aa15.74■□□□□ 0.11
SMPDL3B-205ENST00000548116 RTEL1Q9NZ71 1219 aa15.74■□□□□ 0.11
SMPDL3B-205ENST00000548116 GJA3Q9Y6H8 435 aa15.74■□□□□ 0.11
SMPDL3B-205ENST00000548116 BTBD18B2RXH4 712 aa15.74■□□□□ 0.11
SMPDL3B-205ENST00000548116 PARP1P09874 1014 aaKnown RBP15.74■□□□□ 0.11
SMPDL3B-205ENST00000548116 PDHBP11177 359 aa15.74■□□□□ 0.11
SMPDL3B-205ENST00000548116 DIS3L2Q8IYB7 885 aaKnown RBP15.74■□□□□ 0.11
SMPDL3B-205ENST00000548116 LZTS2Q9BRK4 669 aa15.74■□□□□ 0.11
SMPDL3B-205ENST00000548116 HERC5Q9UII4 1024 aaKnown RBP15.74■□□□□ 0.11
SMPDL3B-205ENST00000548116 CNOT7Q9UIV1 285 aaKnown RBP15.74■□□□□ 0.11
SMPDL3B-205ENST00000548116 KLRF2D3W0D1 207 aa15.73■□□□□ 0.11
SMPDL3B-205ENST00000548116 MYO1BO43795 1136 aa15.73■□□□□ 0.11
SMPDL3B-205ENST00000548116 GDF11O95390 407 aa15.73■□□□□ 0.11
SMPDL3B-205ENST00000548116 SCG2P13521 617 aa15.73■□□□□ 0.11
SMPDL3B-205ENST00000548116 NPY5RQ15761 445 aa15.73■□□□□ 0.11
SMPDL3B-205ENST00000548116 SIAH1Q8IUQ4 282 aa15.73■□□□□ 0.11
SMPDL3B-205ENST00000548116 OXER1Q8TDS5 423 aa15.73■□□□□ 0.11
SMPDL3B-205ENST00000548116 PIBF1Q8WXW3 757 aa15.73■□□□□ 0.11
SMPDL3B-205ENST00000548116 LMNB1P20700 586 aa15.72■□□□□ 0.11
SMPDL3B-205ENST00000548116 NASPP49321 788 aaPredicted RBP15.72■□□□□ 0.11
SMPDL3B-205ENST00000548116 SEPT2Q15019 361 aa15.72■□□□□ 0.11
SMPDL3B-205ENST00000548116 TPRNQ4KMQ1 711 aa15.72■□□□□ 0.11
SMPDL3B-205ENST00000548116 RBM26Q5T8P6 1007 aaKnown RBP15.72■□□□□ 0.11
SMPDL3B-205ENST00000548116 SAMD7Q7Z3H4 446 aa15.72■□□□□ 0.11
SMPDL3B-205ENST00000548116 NOSTRINQ8IVI9 506 aa15.72■□□□□ 0.11
SMPDL3B-205ENST00000548116 MKL1Q969V6 931 aa15.72■□□□□ 0.11
SMPDL3B-205ENST00000548116 SPZ1Q9BXG8 430 aa15.72■□□□□ 0.11
SMPDL3B-205ENST00000548116 FOXP1Q9H334 677 aaPredicted RBP15.72■□□□□ 0.11
SMPDL3B-205ENST00000548116 CPVLQ9H3G5 476 aa15.72■□□□□ 0.11
SMPDL3B-205ENST00000548116 KANSL2Q9H9L4 492 aa15.72■□□□□ 0.11
SMPDL3B-205ENST00000548116 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.72■□□□□ 0.11
SMPDL3B-205ENST00000548116 POLR3EQ9NVU0 708 aa15.72■□□□□ 0.11
SMPDL3B-205ENST00000548116 CLIC4Q9Y696 253 aa15.72■□□□□ 0.11
SMPDL3B-205ENST00000548116 EEF2P13639 858 aaKnown RBP15.72■□□□□ 0.11
SMPDL3B-205ENST00000548116 XBP1P17861 261 aa15.72■□□□□ 0.11
SMPDL3B-205ENST00000548116 SMARCA1P28370 1054 aa15.72■□□□□ 0.11
SMPDL3B-205ENST00000548116 NR5A1Q13285 461 aa15.72■□□□□ 0.11
SMPDL3B-205ENST00000548116 SAFBQ15424 915 aaKnown RBP eCLIP15.72■□□□□ 0.11
SMPDL3B-205ENST00000548116 ABCB5Q2M3G0 1257 aa15.72■□□□□ 0.11
SMPDL3B-205ENST00000548116 ZSCAN23Q3MJ62 389 aa15.72■□□□□ 0.11
SMPDL3B-205ENST00000548116 TMEM179Q6ZVK1 233 aa15.72■□□□□ 0.11
SMPDL3B-205ENST00000548116 LINC00301Q8NCQ3 95 aa15.72■□□□□ 0.11
SMPDL3B-205ENST00000548116 NYAP2Q9P242 653 aa15.72■□□□□ 0.11
SMPDL3B-205ENST00000548116 GNL2Q13823 731 aaKnown RBP15.71■□□□□ 0.11
SMPDL3B-205ENST00000548116 TBC1D10BQ4KMP7 808 aaPredicted RBP15.71■□□□□ 0.11
SMPDL3B-205ENST00000548116 PPP4R3BQ5MIZ7 849 aa15.71■□□□□ 0.11
SMPDL3B-205ENST00000548116 SCAF8Q9UPN6 1271 aaKnown RBP15.71■□□□□ 0.11
SMPDL3B-205ENST00000548116 ASTN2O75129 1339 aaPredicted RBP15.71■□□□□ 0.11
SMPDL3B-205ENST00000548116 FRMPD2Q68DX3 1309 aaPredicted RBP15.7■□□□□ 0.1
SMPDL3B-205ENST00000548116 TBC1D12O60347 775 aa15.7■□□□□ 0.1
SMPDL3B-205ENST00000548116 GH2P01242 217 aa15.7■□□□□ 0.1
SMPDL3B-205ENST00000548116 MAP3K10Q02779 954 aa15.7■□□□□ 0.1
SMPDL3B-205ENST00000548116 ASPRV1Q53RT3 343 aa15.7■□□□□ 0.1
SMPDL3B-205ENST00000548116 ANO1Q5XXA6 986 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms