RNA–Protein interactions for RNA: ENST00000547872.1

CBX5-203, Transcript of chromobox 5, humanhuman

TSL 2

Gene CBX5, Length 745 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-203ENST00000547872 C12orf40Q86WS4 652 aa6.49□□□□□ -1.37
CBX5-203ENST00000547872 SMYD4Q8IYR2 804 aaPredicted RBP6.49□□□□□ -1.37
CBX5-203ENST00000547872 RNF214Q8ND24 703 aa6.49□□□□□ -1.37
CBX5-203ENST00000547872 JARID2Q92833 1246 aaPredicted RBP6.49□□□□□ -1.37
CBX5-203ENST00000547872 PLPPR2Q96GM1 343 aa6.49□□□□□ -1.37
CBX5-203ENST00000547872 SEMA6CQ9H3T2 930 aa6.49□□□□□ -1.37
CBX5-203ENST00000547872 KBTBD4Q9NVX7 518 aa6.49□□□□□ -1.37
CBX5-203ENST00000547872 UNCXA6NJT0 531 aa6.48□□□□□ -1.37
CBX5-203ENST00000547872 BPNT1O95861 308 aa6.48□□□□□ -1.37
CBX5-203ENST00000547872 PF4P02776 101 aa6.48□□□□□ -1.37
CBX5-203ENST00000547872 NFIAQ12857 509 aa6.48□□□□□ -1.37
CBX5-203ENST00000547872 IDI1Q13907 227 aa6.48□□□□□ -1.37
CBX5-203ENST00000547872 SNAP47Q5SQN1 464 aa6.48□□□□□ -1.37
CBX5-203ENST00000547872 LRFN4Q6PJG9 635 aa6.48□□□□□ -1.37
CBX5-203ENST00000547872 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.48□□□□□ -1.37
CBX5-203ENST00000547872 ERMP1Q7Z2K6 904 aa6.48□□□□□ -1.37
CBX5-203ENST00000547872 SLC51AQ86UW1 340 aa6.48□□□□□ -1.37
CBX5-203ENST00000547872 GIMAP7Q8NHV1 300 aa6.48□□□□□ -1.37
CBX5-203ENST00000547872 RHOVQ96L33 236 aa6.48□□□□□ -1.37
CBX5-203ENST00000547872 DBNDD2Q9BQY9 259 aa6.48□□□□□ -1.37
CBX5-203ENST00000547872 COPRSQ9NQ92 184 aa6.48□□□□□ -1.37
CBX5-203ENST00000547872 METTL5Q9NRN9 209 aaKnown RBP6.48□□□□□ -1.37
CBX5-203ENST00000547872 RRP7BPQ9NSQ0 103 aa6.48□□□□□ -1.37
CBX5-203ENST00000547872 TRPC5Q9UL62 973 aaPredicted RBP6.48□□□□□ -1.37
CBX5-203ENST00000547872 SNCAIPQ9Y6H5 919 aa6.48□□□□□ -1.37
CBX5-203ENST00000547872 RIMS2Q9UQ26 1411 aa6.48□□□□□ -1.37
CBX5-203ENST00000547872 KANK1Q14678 1352 aa6.47□□□□□ -1.37
CBX5-203ENST00000547872 DUOX2Q9NRD8 1548 aa6.47□□□□□ -1.37
CBX5-203ENST00000547872 SCAMP3O14828 347 aaKnown RBP6.47□□□□□ -1.37
CBX5-203ENST00000547872 FANCGO15287 622 aa6.47□□□□□ -1.37
CBX5-203ENST00000547872 FAM160A1Q05DH4 1040 aa6.47□□□□□ -1.37
CBX5-203ENST00000547872 INPP5AQ14642 412 aa6.47□□□□□ -1.37
CBX5-203ENST00000547872 LDLRAD1Q5T700 205 aa6.47□□□□□ -1.37
CBX5-203ENST00000547872 CDC37L1Q7L3B6 337 aa6.47□□□□□ -1.37
CBX5-203ENST00000547872 CCDC84Q86UT8 332 aaPredicted RBP6.47□□□□□ -1.37
CBX5-203ENST00000547872 FBXL6Q8N531 539 aa6.47□□□□□ -1.37
CBX5-203ENST00000547872 RNF34Q969K3 372 aa6.47□□□□□ -1.37
CBX5-203ENST00000547872 ISL2Q96A47 359 aa6.47□□□□□ -1.37
CBX5-203ENST00000547872 MFSD14AQ96MC6 490 aa6.47□□□□□ -1.37
CBX5-203ENST00000547872 TBC1D32Q96NH3 1257 aa6.47□□□□□ -1.37
CBX5-203ENST00000547872 LGR6Q9HBX8 967 aa6.47□□□□□ -1.37
CBX5-203ENST00000547872 KIAA1522Q9P206 1035 aaPredicted RBP6.47□□□□□ -1.37
CBX5-203ENST00000547872 PCOLCE2Q9UKZ9 415 aa6.47□□□□□ -1.37
CBX5-203ENST00000547872 BRWD3Q6RI45 1802 aa6.47□□□□□ -1.37
CBX5-203ENST00000547872 CEP162Q5TB80 1403 aa6.47□□□□□ -1.37
CBX5-203ENST00000547872 NALCNQ8IZF0 1738 aa6.47□□□□□ -1.37
CBX5-203ENST00000547872 KIF15Q9NS87 1388 aa6.46□□□□□ -1.37
CBX5-203ENST00000547872 CROCC2H7BZ55 1655 aa6.46□□□□□ -1.37
CBX5-203ENST00000547872 NEFMP07197 916 aa6.46□□□□□ -1.38
CBX5-203ENST00000547872 RBM25P49756 843 aaKnown RBP6.46□□□□□ -1.38
CBX5-203ENST00000547872 ETF1P62495 437 aaKnown RBP6.46□□□□□ -1.38
CBX5-203ENST00000547872 FANCCQ00597 558 aa6.46□□□□□ -1.38
CBX5-203ENST00000547872 RPL6Q02878 288 aaKnown RBP6.46□□□□□ -1.38
CBX5-203ENST00000547872 ZBTB37Q5TC79 503 aa6.46□□□□□ -1.38
CBX5-203ENST00000547872 BNC2Q6ZN30 1099 aaPredicted RBP6.46□□□□□ -1.38
CBX5-203ENST00000547872 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.46□□□□□ -1.38
CBX5-203ENST00000547872 GOLM1Q8NBJ4 401 aa6.46□□□□□ -1.38
CBX5-203ENST00000547872 LRRC59Q96AG4 307 aaKnown RBP6.46□□□□□ -1.38
CBX5-203ENST00000547872 SETD5Q9C0A6 1442 aa6.46□□□□□ -1.38
CBX5-203ENST00000547872 PRKAG2Q9UGJ0 569 aa6.46□□□□□ -1.38
CBX5-203ENST00000547872 TRPM2O94759 1503 aa6.45□□□□□ -1.38
CBX5-203ENST00000547872 PLEKHG1Q9ULL1 1385 aa6.45□□□□□ -1.38
CBX5-203ENST00000547872 ATRNO75882 1429 aa6.45□□□□□ -1.38
CBX5-203ENST00000547872 BLMP54132 1417 aaPredicted RBP6.45□□□□□ -1.38
CBX5-203ENST00000547872 MST1RQ04912 1400 aa6.45□□□□□ -1.38
CBX5-203ENST00000547872 EIF4A3P38919 411 aaKnown RBP6.45□□□□□ -1.38
CBX5-203ENST00000547872 CDK8P49336 464 aa6.45□□□□□ -1.38
CBX5-203ENST00000547872 R3HDM1Q15032 1099 aaKnown RBP6.45□□□□□ -1.38
CBX5-203ENST00000547872 CYFIP1Q7L576 1253 aa6.45□□□□□ -1.38
CBX5-203ENST00000547872 KCT2Q8NC54 265 aa6.45□□□□□ -1.38
CBX5-203ENST00000547872 ZNF507Q8TCN5 953 aa6.45□□□□□ -1.38
CBX5-203ENST00000547872 GATAD2BQ8WXI9 593 aa6.45□□□□□ -1.38
CBX5-203ENST00000547872 C19orf44Q9H6X5 657 aa6.45□□□□□ -1.38
CBX5-203ENST00000547872 ATG3Q9NT62 314 aa6.45□□□□□ -1.38
CBX5-203ENST00000547872 WDR64B1ANS9 1081 aa6.44□□□□□ -1.38
CBX5-203ENST00000547872 DYNC1LI2O43237 492 aaPredicted RBP6.44□□□□□ -1.38
CBX5-203ENST00000547872 F13A1P00488 732 aa6.44□□□□□ -1.38
CBX5-203ENST00000547872 RING1Q06587 406 aa6.44□□□□□ -1.38
CBX5-203ENST00000547872 PDE4BQ07343 736 aa6.44□□□□□ -1.38
CBX5-203ENST00000547872 ZAR1Q86SH2 424 aa6.44□□□□□ -1.38
CBX5-203ENST00000547872 USP48Q86UV5 1035 aa6.44□□□□□ -1.38
CBX5-203ENST00000547872 SHKBP1Q8TBC3 707 aa6.44□□□□□ -1.38
CBX5-203ENST00000547872 ZNF428Q96B54 188 aa6.44□□□□□ -1.38
CBX5-203ENST00000547872 OSBPL1AQ9BXW6 950 aa6.44□□□□□ -1.38
CBX5-203ENST00000547872 WNT10AQ9GZT5 417 aa6.44□□□□□ -1.38
CBX5-203ENST00000547872 SUPT16HQ9Y5B9 1047 aaKnown RBP6.44□□□□□ -1.38
CBX5-203ENST00000547872 CAMTA1Q9Y6Y1 1673 aa6.44□□□□□ -1.38
CBX5-203ENST00000547872 MARF1Q9Y4F3 1742 aaKnown RBP6.44□□□□□ -1.38
CBX5-203ENST00000547872 GLI3P10071 1580 aa6.44□□□□□ -1.38
CBX5-203ENST00000547872 ZFYVE9O95405 1425 aa6.43□□□□□ -1.38
CBX5-203ENST00000547872 PTPRUQ92729 1446 aa6.43□□□□□ -1.38
CBX5-203ENST00000547872 CILPO75339 1184 aa6.43□□□□□ -1.38
CBX5-203ENST00000547872 ITGB7P26010 798 aa6.43□□□□□ -1.38
CBX5-203ENST00000547872 GRK4P32298 578 aa6.43□□□□□ -1.38
CBX5-203ENST00000547872 CDK5R2Q13319 367 aa6.43□□□□□ -1.38
CBX5-203ENST00000547872 SEZ6L2Q6UXD5 910 aa6.43□□□□□ -1.38
CBX5-203ENST00000547872 METTL22Q9BUU2 404 aaPredicted RBP6.43□□□□□ -1.38
CBX5-203ENST00000547872 TACC3Q9Y6A5 838 aa6.43□□□□□ -1.38
CBX5-203ENST00000547872 TMEM131LA2VDJ0 1609 aa6.43□□□□□ -1.38
CBX5-203ENST00000547872 ARHGAP31Q2M1Z3 1444 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms