RNA–Protein interactions for RNA: ENST00000547179.1

LINC00485-201, long intergenic non-protein coding RNA 485, humanhuman

TSL 1 (best) BASIC

Gene LINC00485, Length 3,722 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00485-201ENST00000547179 PKP1Q13835 747 aa12.87□□□□□ -0.35
LINC00485-201ENST00000547179 SULF1Q8IWU6 871 aa12.87□□□□□ -0.35
LINC00485-201ENST00000547179 FAM177A1Q8N128 213 aaPredicted RBP12.87□□□□□ -0.35
LINC00485-201ENST00000547179 TMEM39BQ9GZU3 492 aa12.87□□□□□ -0.35
LINC00485-201ENST00000547179 CALML3P27482 149 aa12.87□□□□□ -0.35
LINC00485-201ENST00000547179 FOXD4L6Q3SYB3 417 aaPredicted RBP12.87□□□□□ -0.35
LINC00485-201ENST00000547179 FOXD4L3Q6VB84 417 aaPredicted RBP12.87□□□□□ -0.35
LINC00485-201ENST00000547179 ZNF341Q9BYN7 854 aa12.87□□□□□ -0.35
LINC00485-201ENST00000547179 GOPCQ9HD26 462 aa12.87□□□□□ -0.35
LINC00485-201ENST00000547179 KLRF2D3W0D1 207 aa12.87□□□□□ -0.35
LINC00485-201ENST00000547179 GUCY1B3Q02153 619 aa12.87□□□□□ -0.35
LINC00485-201ENST00000547179 IKQ13123 557 aaPredicted RBP12.87□□□□□ -0.35
LINC00485-201ENST00000547179 ANGEL2Q5VTE6 544 aaKnown RBP12.87□□□□□ -0.35
LINC00485-201ENST00000547179 CDC37L1Q7L3B6 337 aa12.87□□□□□ -0.35
LINC00485-201ENST00000547179 SH3BP5LQ7L8J4 393 aa12.87□□□□□ -0.35
LINC00485-201ENST00000547179 DCAF4Q8WV16 495 aa12.87□□□□□ -0.35
LINC00485-201ENST00000547179 DEFB129Q9H1M3 183 aa12.87□□□□□ -0.35
LINC00485-201ENST00000547179 DDNO94850 711 aaPredicted RBP12.86□□□□□ -0.35
LINC00485-201ENST00000547179 GDF11O95390 407 aa12.86□□□□□ -0.35
LINC00485-201ENST00000547179 MBD3O95983 291 aa12.86□□□□□ -0.35
LINC00485-201ENST00000547179 GH2P01242 217 aa12.86□□□□□ -0.35
LINC00485-201ENST00000547179 NTRK3Q16288 839 aa12.86□□□□□ -0.35
LINC00485-201ENST00000547179 KRT40Q6A162 431 aa12.86□□□□□ -0.35
LINC00485-201ENST00000547179 FAM196BA6NMK8 535 aa12.86□□□□□ -0.35
LINC00485-201ENST00000547179 PPFIA3O75145 1194 aa12.86□□□□□ -0.35
LINC00485-201ENST00000547179 SEPT2Q15019 361 aa12.86□□□□□ -0.35
LINC00485-201ENST00000547179 LRRC47Q8N1G4 583 aaKnown RBP12.86□□□□□ -0.35
LINC00485-201ENST00000547179 FEZ1Q99689 392 aa12.86□□□□□ -0.35
LINC00485-201ENST00000547179 ZDHHC9Q9Y397 364 aa12.86□□□□□ -0.35
LINC00485-201ENST00000547179 FOCADQ5VW36 1801 aa12.86□□□□□ -0.35
LINC00485-201ENST00000547179 SLC1A4P43007 532 aa12.86□□□□□ -0.35
LINC00485-201ENST00000547179 SLFN13Q68D06 897 aa12.86□□□□□ -0.35
LINC00485-201ENST00000547179 SYAP1Q96A49 352 aaPredicted RBP12.86□□□□□ -0.35
LINC00485-201ENST00000547179 FAM217BQ9NTX9 383 aaPredicted RBP12.86□□□□□ -0.35
LINC00485-201ENST00000547179 PITPNM2Q9BZ72 1349 aa12.86□□□□□ -0.35
LINC00485-201ENST00000547179 ECM29Q5VYK3 1845 aa12.85□□□□□ -0.35
LINC00485-201ENST00000547179 hCG_1984214I3L0E3 225 aa12.85□□□□□ -0.35
LINC00485-201ENST00000547179 SF3A1Q15459 793 aaKnown RBP12.85□□□□□ -0.35
LINC00485-201ENST00000547179 ZNF713Q8N859 430 aaPredicted RBP12.85□□□□□ -0.35
LINC00485-201ENST00000547179 NKX2-3Q8TAU0 364 aa12.85□□□□□ -0.35
LINC00485-201ENST00000547179 AS3MTQ9HBK9 375 aa12.85□□□□□ -0.35
LINC00485-201ENST00000547179 GGA3Q9NZ52 723 aa12.85□□□□□ -0.35
LINC00485-201ENST00000547179 NOL7Q9UMY1 257 aaKnown RBP12.85□□□□□ -0.35
LINC00485-201ENST00000547179 IGKV6D-41A0A0C4DH26 115 aa12.85□□□□□ -0.35
LINC00485-201ENST00000547179 SCG2P13521 617 aa12.85□□□□□ -0.35
LINC00485-201ENST00000547179 EEF2P13639 858 aaKnown RBP12.85□□□□□ -0.35
LINC00485-201ENST00000547179 FDPSP14324 419 aaKnown RBP12.85□□□□□ -0.35
LINC00485-201ENST00000547179 PRELPP51888 382 aa12.85□□□□□ -0.35
LINC00485-201ENST00000547179 NLRP5P59047 1200 aa12.85□□□□□ -0.35
LINC00485-201ENST00000547179 MKL1Q969V6 931 aa12.85□□□□□ -0.35
LINC00485-201ENST00000547179 SPZ1Q9BXG8 430 aa12.85□□□□□ -0.35
LINC00485-201ENST00000547179 PICK1Q9NRD5 415 aa12.85□□□□□ -0.35
LINC00485-201ENST00000547179 DDX49Q9Y6V7 483 aaKnown RBP12.85□□□□□ -0.35
LINC00485-201ENST00000547179 CDK5RAP2Q96SN8 1893 aa12.85□□□□□ -0.35
LINC00485-201ENST00000547179 PRPF40AO75400 957 aaKnown RBP12.85□□□□□ -0.35
LINC00485-201ENST00000547179 EPS15P42566 896 aa12.85□□□□□ -0.35
LINC00485-201ENST00000547179 USP50Q70EL3 339 aaPredicted RBP12.85□□□□□ -0.35
LINC00485-201ENST00000547179 MIGA2Q7L4E1 593 aa12.85□□□□□ -0.35
LINC00485-201ENST00000547179 SOCS7O14512 581 aa12.84□□□□□ -0.35
LINC00485-201ENST00000547179 PLEKHA8P1O95397 391 aa12.84□□□□□ -0.35
LINC00485-201ENST00000547179 SH3GLB2Q9NR46 395 aa12.84□□□□□ -0.35
LINC00485-201ENST00000547179 ZBTB21Q9ULJ3 1066 aa12.84□□□□□ -0.35
LINC00485-201ENST00000547179 CNTNAP1P78357 1384 aa12.84□□□□□ -0.35
LINC00485-201ENST00000547179 PALM3A6NDB9 673 aaPredicted RBP12.84□□□□□ -0.35
LINC00485-201ENST00000547179 FIBPO43427 364 aa12.84□□□□□ -0.35
LINC00485-201ENST00000547179 GALNT17Q6IS24 598 aa12.84□□□□□ -0.35
LINC00485-201ENST00000547179 JMYQ8N9B5 988 aa12.84□□□□□ -0.35
LINC00485-201ENST00000547179 SPATA32Q96LK8 384 aa12.84□□□□□ -0.35
LINC00485-201ENST00000547179 SHTN1A0MZ66 631 aa12.84□□□□□ -0.35
LINC00485-201ENST00000547179 CTNND1O60716 968 aaKnown RBP12.84□□□□□ -0.35
LINC00485-201ENST00000547179 CAP2P40123 477 aa12.84□□□□□ -0.35
LINC00485-201ENST00000547179 GPCPD1Q9NPB8 672 aa12.84□□□□□ -0.35
LINC00485-201ENST00000547179 KRT2P35908 639 aa12.83□□□□□ -0.36
LINC00485-201ENST00000547179 NOVP48745 357 aa12.83□□□□□ -0.36
LINC00485-201ENST00000547179 PNMA8AQ86V59 439 aaPredicted RBP12.83□□□□□ -0.36
LINC00485-201ENST00000547179 CMTR1Q8N1G2 835 aaKnown RBP12.83□□□□□ -0.36
LINC00485-201ENST00000547179 VAT1LQ9HCJ6 419 aa12.83□□□□□ -0.36
LINC00485-201ENST00000547179 MYH8P13535 1937 aa12.83□□□□□ -0.36
LINC00485-201ENST00000547179 DDX60LQ5H9U9 1706 aaKnown RBP12.83□□□□□ -0.36
LINC00485-201ENST00000547179 PPP1R12BO60237 982 aaPredicted RBP12.83□□□□□ -0.36
LINC00485-201ENST00000547179 USP17L2Q6R6M4 530 aa12.83□□□□□ -0.36
LINC00485-201ENST00000547179 SRBD1Q8N5C6 995 aaKnown RBP12.83□□□□□ -0.36
LINC00485-201ENST00000547179 ZC3H15Q8WU90 426 aaKnown RBP12.83□□□□□ -0.36
LINC00485-201ENST00000547179 PIBF1Q8WXW3 757 aa12.83□□□□□ -0.36
LINC00485-201ENST00000547179 DNAJC18Q9H819 358 aa12.83□□□□□ -0.36
LINC00485-201ENST00000547179 CTDP1Q9Y5B0 961 aaPredicted RBP12.83□□□□□ -0.36
LINC00485-201ENST00000547179 CNTNAP5Q8WYK1 1306 aa12.83□□□□□ -0.36
LINC00485-201ENST00000547179 GLTPD2A6NH11 291 aa12.83□□□□□ -0.36
LINC00485-201ENST00000547179 USP17L5A8MUK1 530 aa12.83□□□□□ -0.36
LINC00485-201ENST00000547179 TRAK2O60296 914 aa12.83□□□□□ -0.36
LINC00485-201ENST00000547179 PDHBP11177 359 aa12.83□□□□□ -0.36
LINC00485-201ENST00000547179 GNA11P29992 359 aa12.83□□□□□ -0.36
LINC00485-201ENST00000547179 DNM1Q05193 864 aaKnown RBP12.83□□□□□ -0.36
LINC00485-201ENST00000547179 RESTQ13127 1097 aa12.83□□□□□ -0.36
LINC00485-201ENST00000547179 STK38Q15208 465 aa12.83□□□□□ -0.36
LINC00485-201ENST00000547179 PFKFB3Q16875 520 aaPredicted RBP12.83□□□□□ -0.36
LINC00485-201ENST00000547179 BICD2Q8TD16 824 aa12.83□□□□□ -0.36
LINC00485-201ENST00000547179 GLT8D2Q9H1C3 349 aa12.83□□□□□ -0.36
LINC00485-201ENST00000547179 C6orf50Q9HD87 102 aa12.83□□□□□ -0.36
LINC00485-201ENST00000547179 MAD2L2Q9UI95 211 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms