RNA–Protein interactions for RNA: ENST00000546947.5

CCDC38-205, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 4

Gene CCDC38, Length 559 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-205ENST00000546947 STK11IPQ8N1F8 1099 aa17.61■□□□□ 0.41
CCDC38-205ENST00000546947 SLAIN1Q8ND83 568 aa17.61■□□□□ 0.41
CCDC38-205ENST00000546947 SH3TC2Q8TF17 1288 aa17.61■□□□□ 0.41
CCDC38-205ENST00000546947 FAM227BQ96M60 508 aa17.61■□□□□ 0.41
CCDC38-205ENST00000546947 VCPKMTQ9H867 229 aa17.61■□□□□ 0.41
CCDC38-205ENST00000546947 TXNRD2Q9NNW7 524 aa17.61■□□□□ 0.41
CCDC38-205ENST00000546947 RBPJLQ9UBG7 517 aa17.61■□□□□ 0.41
CCDC38-205ENST00000546947 RABGAP1Q9Y3P9 1069 aa17.61■□□□□ 0.41
CCDC38-205ENST00000546947 PLXNB2O15031 1838 aa17.61■□□□□ 0.41
CCDC38-205ENST00000546947 PARP14Q460N5 1801 aa17.61■□□□□ 0.41
CCDC38-205ENST00000546947 RLFQ13129 1914 aa17.6■□□□□ 0.41
CCDC38-205ENST00000546947 A0A0D9SFI3 127 aa17.6■□□□□ 0.41
CCDC38-205ENST00000546947 FOXP2O15409 715 aa17.6■□□□□ 0.41
CCDC38-205ENST00000546947 EEF2P13639 858 aaKnown RBP17.6■□□□□ 0.41
CCDC38-205ENST00000546947 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.6■□□□□ 0.41
CCDC38-205ENST00000546947 TMEM106CQ9BVX2 250 aa17.6■□□□□ 0.41
CCDC38-205ENST00000546947 A0A0G2JMZ2 1700 aa17.59■□□□□ 0.41
CCDC38-205ENST00000546947 WDR46O15213 610 aaKnown RBP17.59■□□□□ 0.41
CCDC38-205ENST00000546947 SDSP20132 328 aa17.59■□□□□ 0.41
CCDC38-205ENST00000546947 NMIQ13287 307 aaPredicted RBP17.59■□□□□ 0.41
CCDC38-205ENST00000546947 ALX1Q15699 326 aa17.59■□□□□ 0.41
CCDC38-205ENST00000546947 Q3C1V9 767 aa17.59■□□□□ 0.41
CCDC38-205ENST00000546947 VPS53Q5VIR6 699 aa17.59■□□□□ 0.41
CCDC38-205ENST00000546947 PXYLP1Q8TE99 480 aa17.59■□□□□ 0.41
CCDC38-205ENST00000546947 PAGR1Q9BTK6 254 aa17.59■□□□□ 0.41
CCDC38-205ENST00000546947 HOXC10Q9NYD6 342 aa17.59■□□□□ 0.41
CCDC38-205ENST00000546947 NYAP2Q9P242 653 aa17.59■□□□□ 0.41
CCDC38-205ENST00000546947 PLIN4Q96Q06 1357 aa17.58■□□□□ 0.4
CCDC38-205ENST00000546947 CCDC171Q6TFL3 1326 aa17.58■□□□□ 0.4
CCDC38-205ENST00000546947 POTEFA5A3E0 1075 aa17.58■□□□□ 0.4
CCDC38-205ENST00000546947 SPDYE16A6NNV3 312 aaPredicted RBP17.58■□□□□ 0.4
CCDC38-205ENST00000546947 HIP1O00291 1037 aa17.58■□□□□ 0.4
CCDC38-205ENST00000546947 ADCY3O60266 1144 aa17.58■□□□□ 0.4
CCDC38-205ENST00000546947 MAPK4P31152 587 aa17.58■□□□□ 0.4
CCDC38-205ENST00000546947 MFAP1P55081 439 aaKnown RBP17.58■□□□□ 0.4
CCDC38-205ENST00000546947 UBXN2AP68543 259 aa17.58■□□□□ 0.4
CCDC38-205ENST00000546947 ATP2B2Q01814 1243 aa17.58■□□□□ 0.4
CCDC38-205ENST00000546947 COG2Q14746 738 aa17.58■□□□□ 0.4
CCDC38-205ENST00000546947 KIAA1755Q5JYT7 1200 aa17.58■□□□□ 0.4
CCDC38-205ENST00000546947 POTEEQ6S8J3 1075 aa17.58■□□□□ 0.4
CCDC38-205ENST00000546947 TANGO6Q9C0B7 1094 aa17.58■□□□□ 0.4
CCDC38-205ENST00000546947 GOPCQ9HD26 462 aa17.58■□□□□ 0.4
CCDC38-205ENST00000546947 TNRC18O15417 2968 aaPredicted RBP17.57■□□□□ 0.4
CCDC38-205ENST00000546947 ZMYM6O95789 1325 aa17.57■□□□□ 0.4
CCDC38-205ENST00000546947 IGKV6D-41A0A0C4DH26 115 aa17.57■□□□□ 0.4
CCDC38-205ENST00000546947 PRDM1O75626 825 aa17.57■□□□□ 0.4
CCDC38-205ENST00000546947 CNMDO75829 334 aa17.57■□□□□ 0.4
CCDC38-205ENST00000546947 PDE4AP27815 886 aa17.57■□□□□ 0.4
CCDC38-205ENST00000546947 CCNA1P78396 465 aa17.57■□□□□ 0.4
CCDC38-205ENST00000546947 CCAR1Q8IX12 1150 aaKnown RBP17.57■□□□□ 0.4
CCDC38-205ENST00000546947 ANAPC4Q9UJX5 808 aa17.57■□□□□ 0.4
CCDC38-205ENST00000546947 GJD2Q9UKL4 321 aa17.57■□□□□ 0.4
CCDC38-205ENST00000546947 PEX10O60683 326 aa17.56■□□□□ 0.4
CCDC38-205ENST00000546947 TSPY3P0CV98 308 aa17.56■□□□□ 0.4
CCDC38-205ENST00000546947 TSPY8P0CW00 308 aa17.56■□□□□ 0.4
CCDC38-205ENST00000546947 HSPD1P10809 573 aaKnown RBP17.56■□□□□ 0.4
CCDC38-205ENST00000546947 ZNF589Q86UQ0 364 aaPredicted RBP17.56■□□□□ 0.4
CCDC38-205ENST00000546947 SPICE1Q8N0Z3 855 aa17.56■□□□□ 0.4
CCDC38-205ENST00000546947 NEDD1Q8NHV4 660 aa17.56■□□□□ 0.4
CCDC38-205ENST00000546947 SOCS4Q8WXH5 440 aa17.56■□□□□ 0.4
CCDC38-205ENST00000546947 DIAPH3Q9NSV4 1193 aa17.56■□□□□ 0.4
CCDC38-205ENST00000546947 BIN2Q9UBW5 565 aaPredicted RBP17.56■□□□□ 0.4
CCDC38-205ENST00000546947 FGAP02671 866 aa17.55■□□□□ 0.4
CCDC38-205ENST00000546947 DSG3P32926 999 aa17.55■□□□□ 0.4
CCDC38-205ENST00000546947 CTDSPL2Q05D32 466 aa17.55■□□□□ 0.4
CCDC38-205ENST00000546947 TTC22Q5TAA0 569 aa17.55■□□□□ 0.4
CCDC38-205ENST00000546947 GPR142Q7Z601 462 aa17.55■□□□□ 0.4
CCDC38-205ENST00000546947 MB21D1Q8N884 522 aa17.55■□□□□ 0.4
CCDC38-205ENST00000546947 NUDT12Q9BQG2 462 aa17.55■□□□□ 0.4
CCDC38-205ENST00000546947 PORCNQ9H237 461 aa17.55■□□□□ 0.4
CCDC38-205ENST00000546947 BTBD7Q9P203 1132 aa17.55■□□□□ 0.4
CCDC38-205ENST00000546947 SYNPO2Q9UMS6 1093 aa17.55■□□□□ 0.4
CCDC38-205ENST00000546947 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.55■□□□□ 0.4
CCDC38-205ENST00000546947 COL11A1P12107 1806 aaPredicted RBP17.55■□□□□ 0.4
CCDC38-205ENST00000546947 FLOT1O75955 427 aa17.54■□□□□ 0.4
CCDC38-205ENST00000546947 TTLL1O95922 423 aa17.54■□□□□ 0.4
CCDC38-205ENST00000546947 MYCP01106 439 aaPredicted RBP17.54■□□□□ 0.4
CCDC38-205ENST00000546947 TFAP4Q01664 338 aa17.54■□□□□ 0.4
CCDC38-205ENST00000546947 MTFR1Q15390 333 aa17.54■□□□□ 0.4
CCDC38-205ENST00000546947 PPP4R3BQ5MIZ7 849 aa17.54■□□□□ 0.4
CCDC38-205ENST00000546947 PLEKHH3Q7Z736 793 aa17.54■□□□□ 0.4
CCDC38-205ENST00000546947 MKL1Q969V6 931 aa17.54■□□□□ 0.4
CCDC38-205ENST00000546947 CEP95Q96GE4 821 aa17.54■□□□□ 0.4
CCDC38-205ENST00000546947 CWC22Q9HCG8 908 aaKnown RBP17.54■□□□□ 0.4
CCDC38-205ENST00000546947 MTMR4Q9NYA4 1195 aa17.54■□□□□ 0.4
CCDC38-205ENST00000546947 CLIP2Q9UDT6 1046 aa17.54■□□□□ 0.4
CCDC38-205ENST00000546947 LAMA4Q16363 1823 aa17.54■□□□□ 0.4
CCDC38-205ENST00000546947 MKI67P46013 3256 aaKnown RBP17.53■□□□□ 0.4
CCDC38-205ENST00000546947 RAD21O60216 631 aa17.53■□□□□ 0.4
CCDC38-205ENST00000546947 ELNP15502 786 aa17.53■□□□□ 0.4
CCDC38-205ENST00000546947 EN2P19622 333 aaPredicted RBP17.53■□□□□ 0.4
CCDC38-205ENST00000546947 FAM47AQ5JRC9 791 aa17.53■□□□□ 0.4
CCDC38-205ENST00000546947 CWC27Q6UX04 472 aaKnown RBP17.53■□□□□ 0.4
CCDC38-205ENST00000546947 TSPY2A6NKD2 308 aa17.52■□□□□ 0.4
CCDC38-205ENST00000546947 F5H6K3 240 aa17.52■□□□□ 0.4
CCDC38-205ENST00000546947 ORC4O43929 436 aa17.52■□□□□ 0.4
CCDC38-205ENST00000546947 INHAP05111 366 aa17.52■□□□□ 0.4
CCDC38-205ENST00000546947 FGRP09769 529 aa17.52■□□□□ 0.4
CCDC38-205ENST00000546947 XRCC5P13010 732 aaKnown RBP17.52■□□□□ 0.4
CCDC38-205ENST00000546947 CCL5P13501 91 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms