RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 PLIN4Q96Q06 1357 aa18.93■□□□□ 0.62
DDX54-204ENST00000546898 EEF2P13639 858 aaKnown RBP18.92■□□□□ 0.62
DDX54-204ENST00000546898 SDSP20132 328 aa18.92■□□□□ 0.62
DDX54-204ENST00000546898 ERVK-9P63128 1117 aa18.92■□□□□ 0.62
DDX54-204ENST00000546898 ERVK-24P63145 666 aa18.92■□□□□ 0.62
DDX54-204ENST00000546898 ALX1Q15699 326 aa18.92■□□□□ 0.62
DDX54-204ENST00000546898 ZNF444Q8N0Y2 327 aaPredicted RBP18.92■□□□□ 0.62
DDX54-204ENST00000546898 STK11IPQ8N1F8 1099 aa18.92■□□□□ 0.62
DDX54-204ENST00000546898 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.92■□□□□ 0.62
DDX54-204ENST00000546898 RBPJLQ9UBG7 517 aa18.92■□□□□ 0.62
DDX54-204ENST00000546898 RABGAP1Q9Y3P9 1069 aa18.92■□□□□ 0.62
DDX54-204ENST00000546898 WDR46O15213 610 aaKnown RBP18.91■□□□□ 0.62
DDX54-204ENST00000546898 GRK4P32298 578 aa18.91■□□□□ 0.62
DDX54-204ENST00000546898 IRF5Q13568 498 aa18.91■□□□□ 0.62
DDX54-204ENST00000546898 VPS53Q5VIR6 699 aa18.91■□□□□ 0.62
DDX54-204ENST00000546898 SLAIN1Q8ND83 568 aa18.91■□□□□ 0.62
DDX54-204ENST00000546898 PAGR1Q9BTK6 254 aa18.91■□□□□ 0.62
DDX54-204ENST00000546898 GOPCQ9HD26 462 aa18.91■□□□□ 0.62
DDX54-204ENST00000546898 TXNRD2Q9NNW7 524 aa18.91■□□□□ 0.62
DDX54-204ENST00000546898 ANAPC4Q9UJX5 808 aa18.91■□□□□ 0.62
DDX54-204ENST00000546898 IGKV6D-41A0A0C4DH26 115 aa18.9■□□□□ 0.62
DDX54-204ENST00000546898 SPDYE16A6NNV3 312 aaPredicted RBP18.9■□□□□ 0.62
DDX54-204ENST00000546898 PRDM1O75626 825 aa18.9■□□□□ 0.62
DDX54-204ENST00000546898 FLT3LGP49771 235 aa18.9■□□□□ 0.62
DDX54-204ENST00000546898 ATP2B2Q01814 1243 aa18.9■□□□□ 0.62
DDX54-204ENST00000546898 TTC22Q5TAA0 569 aa18.9■□□□□ 0.62
DDX54-204ENST00000546898 ZNF589Q86UQ0 364 aaPredicted RBP18.9■□□□□ 0.62
DDX54-204ENST00000546898 SH3TC2Q8TF17 1288 aa18.9■□□□□ 0.62
DDX54-204ENST00000546898 TANGO6Q9C0B7 1094 aa18.9■□□□□ 0.62
DDX54-204ENST00000546898 DIAPH3Q9NSV4 1193 aa18.9■□□□□ 0.62
DDX54-204ENST00000546898 NYAP2Q9P242 653 aa18.9■□□□□ 0.62
DDX54-204ENST00000546898 GABRQQ9UN88 632 aa18.9■□□□□ 0.62
DDX54-204ENST00000546898 COL11A1P12107 1806 aaPredicted RBP18.9■□□□□ 0.62
DDX54-204ENST00000546898 HSPD1P10809 573 aaKnown RBP18.89■□□□□ 0.61
DDX54-204ENST00000546898 MAPK4P31152 587 aa18.89■□□□□ 0.61
DDX54-204ENST00000546898 CCNA1P78396 465 aa18.89■□□□□ 0.61
DDX54-204ENST00000546898 COG2Q14746 738 aa18.89■□□□□ 0.61
DDX54-204ENST00000546898 PXYLP1Q8TE99 480 aa18.89■□□□□ 0.61
DDX54-204ENST00000546898 HOXC10Q9NYD6 342 aa18.89■□□□□ 0.61
DDX54-204ENST00000546898 SYNPO2Q9UMS6 1093 aa18.89■□□□□ 0.61
DDX54-204ENST00000546898 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.89■□□□□ 0.61
DDX54-204ENST00000546898 CNMDO75829 334 aa18.88■□□□□ 0.61
DDX54-204ENST00000546898 TSPY3P0CV98 308 aa18.88■□□□□ 0.61
DDX54-204ENST00000546898 TSPY8P0CW00 308 aa18.88■□□□□ 0.61
DDX54-204ENST00000546898 KIAA1755Q5JYT7 1200 aa18.88■□□□□ 0.61
DDX54-204ENST00000546898 PPP4R3BQ5MIZ7 849 aa18.88■□□□□ 0.61
DDX54-204ENST00000546898 POTEEQ6S8J3 1075 aa18.88■□□□□ 0.61
DDX54-204ENST00000546898 NEDD1Q8NHV4 660 aa18.88■□□□□ 0.61
DDX54-204ENST00000546898 TMEM106CQ9BVX2 250 aa18.88■□□□□ 0.61
DDX54-204ENST00000546898 ADCY3O60266 1144 aa18.87■□□□□ 0.61
DDX54-204ENST00000546898 FGAP02671 866 aa18.87■□□□□ 0.61
DDX54-204ENST00000546898 GSPT1P15170 499 aaKnown RBP18.87■□□□□ 0.61
DDX54-204ENST00000546898 UBXN2AP68543 259 aa18.87■□□□□ 0.61
DDX54-204ENST00000546898 CCAR1Q8IX12 1150 aaKnown RBP18.87■□□□□ 0.61
DDX54-204ENST00000546898 SPICE1Q8N0Z3 855 aa18.87■□□□□ 0.61
DDX54-204ENST00000546898 MB21D1Q8N884 522 aa18.87■□□□□ 0.61
DDX54-204ENST00000546898 SOCS4Q8WXH5 440 aa18.87■□□□□ 0.61
DDX54-204ENST00000546898 CEP95Q96GE4 821 aa18.87■□□□□ 0.61
DDX54-204ENST00000546898 ZNF236Q9UL36 1845 aa18.87■□□□□ 0.61
DDX54-204ENST00000546898 CENPFP49454 3210 aa18.87■□□□□ 0.61
DDX54-204ENST00000546898 ORC4O43929 436 aa18.86■□□□□ 0.61
DDX54-204ENST00000546898 FLOT1O75955 427 aa18.86■□□□□ 0.61
DDX54-204ENST00000546898 TTLL1O95922 423 aa18.86■□□□□ 0.61
DDX54-204ENST00000546898 DSG3P32926 999 aa18.86■□□□□ 0.61
DDX54-204ENST00000546898 CTDSPL2Q05D32 466 aa18.86■□□□□ 0.61
DDX54-204ENST00000546898 Q3C1V9 767 aa18.86■□□□□ 0.61
DDX54-204ENST00000546898 CWC27Q6UX04 472 aaKnown RBP18.86■□□□□ 0.61
DDX54-204ENST00000546898 MKL1Q969V6 931 aa18.86■□□□□ 0.61
DDX54-204ENST00000546898 MTMR4Q9NYA4 1195 aa18.86■□□□□ 0.61
DDX54-204ENST00000546898 GJD2Q9UKL4 321 aa18.86■□□□□ 0.61
DDX54-204ENST00000546898 PEX10O60683 326 aa18.85■□□□□ 0.61
DDX54-204ENST00000546898 FGRP09769 529 aa18.85■□□□□ 0.61
DDX54-204ENST00000546898 TFAP4Q01664 338 aa18.85■□□□□ 0.61
DDX54-204ENST00000546898 GPR142Q7Z601 462 aa18.85■□□□□ 0.61
DDX54-204ENST00000546898 NUDT12Q9BQG2 462 aa18.85■□□□□ 0.61
DDX54-204ENST00000546898 PORCNQ9H237 461 aa18.85■□□□□ 0.61
DDX54-204ENST00000546898 CWC22Q9HCG8 908 aaKnown RBP18.85■□□□□ 0.61
DDX54-204ENST00000546898 BTBD7Q9P203 1132 aa18.85■□□□□ 0.61
DDX54-204ENST00000546898 CLIP2Q9UDT6 1046 aa18.85■□□□□ 0.61
DDX54-204ENST00000546898 PDE4DIPQ5VU43 2346 aa18.85■□□□□ 0.61
DDX54-204ENST00000546898 RAD50Q92878 1312 aa18.84■□□□□ 0.61
DDX54-204ENST00000546898 POTEFA5A3E0 1075 aa18.84■□□□□ 0.61
DDX54-204ENST00000546898 TSPY2A6NKD2 308 aa18.84■□□□□ 0.61
DDX54-204ENST00000546898 PCP11498 1178 aaKnown RBP18.84■□□□□ 0.61
DDX54-204ENST00000546898 FAM47AQ5JRC9 791 aa18.84■□□□□ 0.61
DDX54-204ENST00000546898 PLEKHH3Q7Z736 793 aa18.84■□□□□ 0.61
DDX54-204ENST00000546898 BIN2Q9UBW5 565 aaPredicted RBP18.84■□□□□ 0.61
DDX54-204ENST00000546898 F5H6K3 240 aa18.83■□□□□ 0.6
DDX54-204ENST00000546898 RAD21O60216 631 aa18.83■□□□□ 0.6
DDX54-204ENST00000546898 KLRC3Q07444 240 aa18.83■□□□□ 0.6
DDX54-204ENST00000546898 FAM83BQ5T0W9 1011 aa18.83■□□□□ 0.6
DDX54-204ENST00000546898 CENPQQ7L2Z9 268 aaPredicted RBP18.83■□□□□ 0.6
DDX54-204ENST00000546898 GMCL1P1Q8NEA9 526 aa18.83■□□□□ 0.6
DDX54-204ENST00000546898 DSCC1Q9BVC3 393 aa18.83■□□□□ 0.6
DDX54-204ENST00000546898 RANBP6O60518 1105 aaKnown RBP18.82■□□□□ 0.6
DDX54-204ENST00000546898 NDUFB10O96000 172 aa18.82■□□□□ 0.6
DDX54-204ENST00000546898 HMGCRP04035 888 aa18.82■□□□□ 0.6
DDX54-204ENST00000546898 INHAP05111 366 aa18.82■□□□□ 0.6
DDX54-204ENST00000546898 XRCC5P13010 732 aaKnown RBP18.82■□□□□ 0.6
DDX54-204ENST00000546898 ELNP15502 786 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms