RNA–Protein interactions for RNA: ENST00000546849.1

NPAS3-204, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 3

Gene NPAS3, Length 464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-204ENST00000546849 PCDHB10Q9UN67 800 aa9.19□□□□□ -0.94
NPAS3-204ENST00000546849 TP53P04637 393 aaPredicted RBP9.18□□□□□ -0.94
NPAS3-204ENST00000546849 H2AFB1P0C5Y9 115 aa9.18□□□□□ -0.94
NPAS3-204ENST00000546849 H2AFB2P0C5Z0 115 aa9.18□□□□□ -0.94
NPAS3-204ENST00000546849 IFRD2Q12894 506 aaPredicted RBP9.18□□□□□ -0.94
NPAS3-204ENST00000546849 PRSS36Q5K4E3 855 aa9.18□□□□□ -0.94
NPAS3-204ENST00000546849 TMEM192Q8IY95 271 aa9.18□□□□□ -0.94
NPAS3-204ENST00000546849 CELF2-AS1Q8N7Q2 184 aa9.18□□□□□ -0.94
NPAS3-204ENST00000546849 DNAJB8Q8NHS0 232 aa9.18□□□□□ -0.94
NPAS3-204ENST00000546849 RNF141Q8WVD5 230 aa9.18□□□□□ -0.94
NPAS3-204ENST00000546849 ZNF214Q9UL59 606 aaPredicted RBP9.18□□□□□ -0.94
NPAS3-204ENST00000546849 LTBP3Q9NS15 1303 aa9.17□□□□□ -0.94
NPAS3-204ENST00000546849 WDR64B1ANS9 1081 aa9.17□□□□□ -0.94
NPAS3-204ENST00000546849 GJB6O95452 261 aa9.17□□□□□ -0.94
NPAS3-204ENST00000546849 CBX7O95931 251 aa9.17□□□□□ -0.94
NPAS3-204ENST00000546849 IGLV1-40P01703 118 aa9.17□□□□□ -0.94
NPAS3-204ENST00000546849 FSTP19883 344 aa9.17□□□□□ -0.94
NPAS3-204ENST00000546849 ADMP35318 185 aa9.17□□□□□ -0.94
NPAS3-204ENST00000546849 RIN3Q8TB24 985 aa9.17□□□□□ -0.94
NPAS3-204ENST00000546849 ASCC2Q9H1I8 757 aaPredicted RBP9.17□□□□□ -0.94
NPAS3-204ENST00000546849 KCNH3Q9ULD8 1083 aa9.17□□□□□ -0.94
NPAS3-204ENST00000546849 FAM170BA6NMN3 283 aa9.16□□□□□ -0.94
NPAS3-204ENST00000546849 B2RBV5 119 aa9.16□□□□□ -0.94
NPAS3-204ENST00000546849 HEATR6Q6AI08 1181 aaKnown RBP9.16□□□□□ -0.94
NPAS3-204ENST00000546849 ZNF765Q7L2R6 523 aa9.16□□□□□ -0.94
NPAS3-204ENST00000546849 EEPD1Q7L9B9 569 aa9.16□□□□□ -0.94
NPAS3-204ENST00000546849 PPP1R13LQ8WUF5 828 aa9.16□□□□□ -0.94
NPAS3-204ENST00000546849 DEPDC7Q96QD5 511 aa9.16□□□□□ -0.94
NPAS3-204ENST00000546849 FBXL21Q9UKT6 434 aa9.16□□□□□ -0.94
NPAS3-204ENST00000546849 FAM155AB1AL88 458 aaPredicted RBP9.15□□□□□ -0.94
NPAS3-204ENST00000546849 KIR3DL1P43629 444 aa9.15□□□□□ -0.94
NPAS3-204ENST00000546849 SERINC3Q13530 473 aa9.15□□□□□ -0.94
NPAS3-204ENST00000546849 SHKBP1Q8TBC3 707 aa9.15□□□□□ -0.94
NPAS3-204ENST00000546849 MKL1Q969V6 931 aa9.15□□□□□ -0.94
NPAS3-204ENST00000546849 PPP1R14AQ96A00 147 aa9.15□□□□□ -0.94
NPAS3-204ENST00000546849 GBP3Q9H0R5 595 aa9.15□□□□□ -0.94
NPAS3-204ENST00000546849 LRRC4CQ9HCJ2 640 aa9.15□□□□□ -0.94
NPAS3-204ENST00000546849 EOMESO95936 686 aa9.14□□□□□ -0.95
NPAS3-204ENST00000546849 F13BP05160 661 aa9.14□□□□□ -0.95
NPAS3-204ENST00000546849 TCEAL1Q15170 157 aa9.14□□□□□ -0.95
NPAS3-204ENST00000546849 NBPF12Q5TAG4 269 aaPredicted RBP9.14□□□□□ -0.95
NPAS3-204ENST00000546849 CDK11AQ9UQ88 783 aaPredicted RBP9.14□□□□□ -0.95
NPAS3-204ENST00000546849 LEMD3Q9Y2U8 911 aa9.14□□□□□ -0.95
NPAS3-204ENST00000546849 PCDHB12Q9Y5F1 795 aa9.14□□□□□ -0.95
NPAS3-204ENST00000546849 AGRPO00253 132 aa9.13□□□□□ -0.95
NPAS3-204ENST00000546849 ITIH2P19823 946 aa9.13□□□□□ -0.95
NPAS3-204ENST00000546849 CPSF6Q16630 551 aaKnown RBP eCLIP9.13□□□□□ -0.95
NPAS3-204ENST00000546849 ADAT2Q7Z6V5 191 aaKnown RBP9.13□□□□□ -0.95
NPAS3-204ENST00000546849 MFSD4AQ8N468 514 aa9.13□□□□□ -0.95
NPAS3-204ENST00000546849 MICAL1Q8TDZ2 1067 aa9.13□□□□□ -0.95
NPAS3-204ENST00000546849 GATA6Q92908 595 aa9.13□□□□□ -0.95
NPAS3-204ENST00000546849 CWC22Q9HCG8 908 aaKnown RBP9.13□□□□□ -0.95
NPAS3-204ENST00000546849 SNTG2Q9NY99 539 aa9.13□□□□□ -0.95
NPAS3-204ENST00000546849 SUGT1Q9Y2Z0 365 aa9.13□□□□□ -0.95
NPAS3-204ENST00000546849 C9IYK1 514 aa9.12□□□□□ -0.95
NPAS3-204ENST00000546849 PDPK1O15530 556 aa9.12□□□□□ -0.95
NPAS3-204ENST00000546849 CLEC16AQ2KHT3 1053 aa9.12□□□□□ -0.95
NPAS3-204ENST00000546849 MTERF2Q49AM1 385 aa9.12□□□□□ -0.95
NPAS3-204ENST00000546849 NOL9Q5SY16 702 aaKnown RBP9.12□□□□□ -0.95
NPAS3-204ENST00000546849 LRP10Q7Z4F1 713 aa9.12□□□□□ -0.95
NPAS3-204ENST00000546849 NOP9Q86U38 636 aaKnown RBP9.12□□□□□ -0.95
NPAS3-204ENST00000546849 PPFIBP1Q86W92 1011 aa9.12□□□□□ -0.95
NPAS3-204ENST00000546849 HAUS7Q99871 368 aa9.12□□□□□ -0.95
NPAS3-204ENST00000546849 CCDC113Q9H0I3 377 aa9.12□□□□□ -0.95
NPAS3-204ENST00000546849 SCO2A0A1W2PP80 73 aa9.11□□□□□ -0.95
NPAS3-204ENST00000546849 IGF2BP3O00425 579 aaKnown RBP eCLIP9.11□□□□□ -0.95
NPAS3-204ENST00000546849 ITGA4P13612 1032 aa9.11□□□□□ -0.95
NPAS3-204ENST00000546849 AUHQ13825 339 aaKnown RBP9.11□□□□□ -0.95
NPAS3-204ENST00000546849 SV2CQ496J9 727 aa9.11□□□□□ -0.95
NPAS3-204ENST00000546849 ARTNQ5T4W7 220 aa9.11□□□□□ -0.95
NPAS3-204ENST00000546849 C7orf61Q8IZ16 206 aa9.11□□□□□ -0.95
NPAS3-204ENST00000546849 FBXL18Q96ME1 805 aa9.11□□□□□ -0.95
NPAS3-204ENST00000546849 APBA2Q99767 749 aa9.11□□□□□ -0.95
NPAS3-204ENST00000546849 LRP2BPQ9P2M1 347 aa9.11□□□□□ -0.95
NPAS3-204ENST00000546849 TMA7Q9Y2S6 64 aaKnown RBP9.11□□□□□ -0.95
NPAS3-204ENST00000546849 ANKRD34BA5PLL1 514 aa9.1□□□□□ -0.95
NPAS3-204ENST00000546849 CYP26A1O43174 497 aa9.1□□□□□ -0.95
NPAS3-204ENST00000546849 SUSD5O60279 629 aa9.1□□□□□ -0.95
NPAS3-204ENST00000546849 PPM1BO75688 479 aa9.1□□□□□ -0.95
NPAS3-204ENST00000546849 ZNF143P52747 638 aaPredicted RBP9.1□□□□□ -0.95
NPAS3-204ENST00000546849 NBPF9Q3BBW0 867 aa9.1□□□□□ -0.95
NPAS3-204ENST00000546849 AXDND1Q5T1B0 1012 aaPredicted RBP9.1□□□□□ -0.95
NPAS3-204ENST00000546849 DCAF15Q66K64 600 aa9.1□□□□□ -0.95
NPAS3-204ENST00000546849 SLC51AQ86UW1 340 aa9.1□□□□□ -0.95
NPAS3-204ENST00000546849 FAM181AQ8N9Y4 354 aa9.1□□□□□ -0.95
NPAS3-204ENST00000546849 KLHL6Q8WZ60 621 aa9.1□□□□□ -0.95
NPAS3-204ENST00000546849 DSCC1Q9BVC3 393 aa9.1□□□□□ -0.95
NPAS3-204ENST00000546849 EPHX1P07099 455 aa9.09□□□□□ -0.95
NPAS3-204ENST00000546849 RASGRF1Q13972 1273 aa9.09□□□□□ -0.95
NPAS3-204ENST00000546849 SHISA5Q8N114 240 aa9.09□□□□□ -0.95
NPAS3-204ENST00000546849 ST13P5Q8NFI4 369 aaPredicted RBP9.09□□□□□ -0.95
NPAS3-204ENST00000546849 EPN3Q9H201 632 aa9.09□□□□□ -0.95
NPAS3-204ENST00000546849 ZFP64Q9NPA5 681 aa9.09□□□□□ -0.95
NPAS3-204ENST00000546849 PIM2Q9P1W9 311 aa9.09□□□□□ -0.95
NPAS3-204ENST00000546849 MSRB2Q9Y3D2 182 aa9.09□□□□□ -0.95
NPAS3-204ENST00000546849 IQCA1LA6NCM1 817 aa9.08□□□□□ -0.96
NPAS3-204ENST00000546849 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.08□□□□□ -0.96
NPAS3-204ENST00000546849 LRRN2O75325 713 aa9.08□□□□□ -0.96
NPAS3-204ENST00000546849 RASA3Q14644 834 aa9.08□□□□□ -0.96
NPAS3-204ENST00000546849 C22orf34Q6ZV56 151 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms