RNA–Protein interactions for RNA: ENST00000546812.1

SSH1-205, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-205ENST00000546812 RLFQ13129 1914 aa11.35□□□□□ -0.59
SSH1-205ENST00000546812 ZBED9Q6R2W3 1325 aa11.35□□□□□ -0.59
SSH1-205ENST00000546812 MCAMP43121 646 aa11.34□□□□□ -0.59
SSH1-205ENST00000546812 RAB3GAP1Q15042 981 aa11.34□□□□□ -0.59
SSH1-205ENST00000546812 ANKRD33Q7Z3H0 272 aa11.34□□□□□ -0.59
SSH1-205ENST00000546812 RNF180Q86T96 592 aa11.34□□□□□ -0.59
SSH1-205ENST00000546812 SHCBP1Q8NEM2 672 aa11.34□□□□□ -0.59
SSH1-205ENST00000546812 ACER1Q8TDN7 264 aa11.34□□□□□ -0.59
SSH1-205ENST00000546812 YTHDC1Q96MU7 727 aaKnown RBP11.34□□□□□ -0.59
SSH1-205ENST00000546812 TOX2Q96NM4 488 aa11.34□□□□□ -0.59
SSH1-205ENST00000546812 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.34□□□□□ -0.59
SSH1-205ENST00000546812 PBX4Q9BYU1 374 aa11.34□□□□□ -0.59
SSH1-205ENST00000546812 RPAP3Q9H6T3 665 aaPredicted RBP11.34□□□□□ -0.59
SSH1-205ENST00000546812 XPNPEP3Q9NQH7 507 aa11.34□□□□□ -0.59
SSH1-205ENST00000546812 HOXC10Q9NYD6 342 aa11.34□□□□□ -0.59
SSH1-205ENST00000546812 SAP30BPQ9UHR5 308 aaKnown RBP11.34□□□□□ -0.59
SSH1-205ENST00000546812 NRBP1Q9UHY1 535 aa11.34□□□□□ -0.59
SSH1-205ENST00000546812 ATAD5Q96QE3 1844 aa11.34□□□□□ -0.59
SSH1-205ENST00000546812 CHD7Q9P2D1 2997 aa11.34□□□□□ -0.59
SSH1-205ENST00000546812 SYNGAP1Q96PV0 1343 aa11.34□□□□□ -0.59
SSH1-205ENST00000546812 FRMPD3Q5JV73 1810 aa11.33□□□□□ -0.6
SSH1-205ENST00000546812 TIMP1P01033 207 aa11.33□□□□□ -0.6
SSH1-205ENST00000546812 UQCRFS1P1P0C7P4 283 aa11.33□□□□□ -0.6
SSH1-205ENST00000546812 RARBP10826 455 aa11.33□□□□□ -0.6
SSH1-205ENST00000546812 ERCC3P19447 782 aa11.33□□□□□ -0.6
SSH1-205ENST00000546812 PBX2P40425 430 aa11.33□□□□□ -0.6
SSH1-205ENST00000546812 FAAP100Q0VG06 881 aa11.33□□□□□ -0.6
SSH1-205ENST00000546812 ADGRE1Q14246 886 aa11.33□□□□□ -0.6
SSH1-205ENST00000546812 COG2Q14746 738 aa11.33□□□□□ -0.6
SSH1-205ENST00000546812 CCDC85BQ15834 202 aaPredicted RBP11.33□□□□□ -0.6
SSH1-205ENST00000546812 ADGRA1Q86SQ6 560 aa11.33□□□□□ -0.6
SSH1-205ENST00000546812 ABRAQ8N0Z2 381 aa11.33□□□□□ -0.6
SSH1-205ENST00000546812 SLC44A5Q8NCS7 719 aa11.33□□□□□ -0.6
SSH1-205ENST00000546812 MAML3Q96JK9 1138 aa11.33□□□□□ -0.6
SSH1-205ENST00000546812 SPATC1LQ9H0A9 340 aa11.33□□□□□ -0.6
SSH1-205ENST00000546812 A0A1W2PQ45 241 aaPredicted RBP11.32□□□□□ -0.6
SSH1-205ENST00000546812 A0A1W2PQY0 241 aa11.32□□□□□ -0.6
SSH1-205ENST00000546812 GRXCR1A8MXD5 290 aa11.32□□□□□ -0.6
SSH1-205ENST00000546812 DCDC2CA8MYV0 355 aa11.32□□□□□ -0.6
SSH1-205ENST00000546812 IGSF3O75054 1194 aa11.32□□□□□ -0.6
SSH1-205ENST00000546812 PGK1P00558 417 aa11.32□□□□□ -0.6
SSH1-205ENST00000546812 ABCB5Q2M3G0 1257 aa11.32□□□□□ -0.6
SSH1-205ENST00000546812 CERKLQ49MI3 558 aaPredicted RBP11.32□□□□□ -0.6
SSH1-205ENST00000546812 RASIP1Q5U651 963 aa11.32□□□□□ -0.6
SSH1-205ENST00000546812 MFSD5Q6N075 450 aa11.32□□□□□ -0.6
SSH1-205ENST00000546812 CCDC174Q6PII3 467 aa11.32□□□□□ -0.6
SSH1-205ENST00000546812 CCDC129Q6ZRS4 1044 aa11.32□□□□□ -0.6
SSH1-205ENST00000546812 C16orf59Q7L2K0 433 aa11.32□□□□□ -0.6
SSH1-205ENST00000546812 CDCA7LQ96GN5 454 aa11.32□□□□□ -0.6
SSH1-205ENST00000546812 MROH8Q9H579 483 aa11.32□□□□□ -0.6
SSH1-205ENST00000546812 SERPINB13Q9UIV8 391 aa11.32□□□□□ -0.6
SSH1-205ENST00000546812 SRGAP3O43295 1099 aa11.31□□□□□ -0.6
SSH1-205ENST00000546812 BMP1P13497 986 aa11.31□□□□□ -0.6
SSH1-205ENST00000546812 IGFBP4P22692 258 aa11.31□□□□□ -0.6
SSH1-205ENST00000546812 ALDH1L2Q3SY69 923 aa11.31□□□□□ -0.6
SSH1-205ENST00000546812 TMEM240Q5SV17 173 aa11.31□□□□□ -0.6
SSH1-205ENST00000546812 NECAB3Q96P71 396 aaPredicted RBP11.31□□□□□ -0.6
SSH1-205ENST00000546812 TSEN34Q9BSV6 310 aaKnown RBP11.31□□□□□ -0.6
SSH1-205ENST00000546812 EHD4Q9H223 541 aa11.31□□□□□ -0.6
SSH1-205ENST00000546812 TSPYL2Q9H2G4 693 aaPredicted RBP11.31□□□□□ -0.6
SSH1-205ENST00000546812 CABP5Q9NP86 173 aa11.31□□□□□ -0.6
SSH1-205ENST00000546812 SNRKQ9NRH2 765 aa11.31□□□□□ -0.6
SSH1-205ENST00000546812 CXXC1Q9P0U4 656 aaPredicted RBP11.31□□□□□ -0.6
SSH1-205ENST00000546812 TBX21Q9UL17 535 aa11.31□□□□□ -0.6
SSH1-205ENST00000546812 SIPA1L1O43166 1804 aa11.3□□□□□ -0.6
SSH1-205ENST00000546812 E9PSI1 815 aa11.3□□□□□ -0.6
SSH1-205ENST00000546812 FCER1AP12319 257 aa11.3□□□□□ -0.6
SSH1-205ENST00000546812 ACLYP53396 1101 aa11.3□□□□□ -0.6
SSH1-205ENST00000546812 DYNLL1P63167 89 aaKnown RBP11.3□□□□□ -0.6
SSH1-205ENST00000546812 SLFN5Q08AF3 891 aa11.3□□□□□ -0.6
SSH1-205ENST00000546812 PPIGQ13427 754 aaKnown RBP eCLIP11.3□□□□□ -0.61e-7■■■■■ 29.8
SSH1-205ENST00000546812 MTX1Q13505 466 aa11.3□□□□□ -0.6
SSH1-205ENST00000546812 NCAPG2Q86XI2 1143 aa11.3□□□□□ -0.6
SSH1-205ENST00000546812 MB21D1Q8N884 522 aa11.3□□□□□ -0.6
SSH1-205ENST00000546812 NUP133Q8WUM0 1156 aa11.3□□□□□ -0.6
SSH1-205ENST00000546812 MEIS3Q99687 375 aa11.3□□□□□ -0.6
SSH1-205ENST00000546812 STARD7Q9NQZ5 370 aa11.3□□□□□ -0.6
SSH1-205ENST00000546812 MSRAQ9UJ68 235 aa11.3□□□□□ -0.6
SSH1-205ENST00000546812 HCN4Q9Y3Q4 1203 aa11.3□□□□□ -0.6
SSH1-205ENST00000546812 MYO9BQ13459 2157 aa11.29□□□□□ -0.6
SSH1-205ENST00000546812 ADAMTS4O75173 837 aa11.29□□□□□ -0.6
SSH1-205ENST00000546812 CYP2E1P05181 493 aaPredicted RBP11.29□□□□□ -0.6
SSH1-205ENST00000546812 GUCY1A2P33402 732 aa11.29□□□□□ -0.6
SSH1-205ENST00000546812 PLS1Q14651 629 aa11.29□□□□□ -0.6
SSH1-205ENST00000546812 RAB30Q15771 203 aa11.29□□□□□ -0.6
SSH1-205ENST00000546812 AAK1Q2M2I8 961 aa11.29□□□□□ -0.6
SSH1-205ENST00000546812 TTC6Q86TZ1 520 aa11.29□□□□□ -0.6
SSH1-205ENST00000546812 TINF2Q9BSI4 451 aa11.29□□□□□ -0.6
SSH1-205ENST00000546812 LRFN3Q9BTN0 628 aa11.29□□□□□ -0.6
SSH1-205ENST00000546812 TANGO6Q9C0B7 1094 aa11.29□□□□□ -0.6
SSH1-205ENST00000546812 SMC4Q9NTJ3 1288 aa11.29□□□□□ -0.6
SSH1-205ENST00000546812 REV3LO60673 3130 aa11.28□□□□□ -0.6
SSH1-205ENST00000546812 A0A1W2PRG0 241 aa11.28□□□□□ -0.6
SSH1-205ENST00000546812 MOXD2PA6NHM9 499 aa11.28□□□□□ -0.6
SSH1-205ENST00000546812 ZNF865P0CJ78 1059 aaPredicted RBP11.28□□□□□ -0.6
SSH1-205ENST00000546812 AKR1A1P14550 325 aa11.28□□□□□ -0.6
SSH1-205ENST00000546812 CSF2RAP15509 400 aa11.28□□□□□ -0.6
SSH1-205ENST00000546812 TAL1P17542 331 aaPredicted RBP11.28□□□□□ -0.6
SSH1-205ENST00000546812 DSG3P32926 999 aa11.28□□□□□ -0.6
SSH1-205ENST00000546812 SHMT1P34896 483 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms