RNA–Protein interactions for RNA: ENST00000546697.1

SSH1-204, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-204ENST00000546697 CAPN2P17655 700 aa18.29■□□□□ 0.52
SSH1-204ENST00000546697 GRK4P32298 578 aa18.29■□□□□ 0.52
SSH1-204ENST00000546697 FLT3LGP49771 235 aa18.29■□□□□ 0.52
SSH1-204ENST00000546697 SOX10P56693 466 aa18.29■□□□□ 0.52
SSH1-204ENST00000546697 KIAA1755Q5JYT7 1200 aa18.29■□□□□ 0.52
SSH1-204ENST00000546697 USP6NLQ92738 828 aa18.29■□□□□ 0.52
SSH1-204ENST00000546697 COA7Q96BR5 231 aa18.29■□□□□ 0.52
SSH1-204ENST00000546697 RPAP3Q9H6T3 665 aaPredicted RBP18.29■□□□□ 0.52
SSH1-204ENST00000546697 ADAMTS5Q9UNA0 930 aa18.29■□□□□ 0.52
SSH1-204ENST00000546697 A0A0D9SFI3 127 aa18.28■□□□□ 0.52
SSH1-204ENST00000546697 WDR46O15213 610 aaKnown RBP18.28■□□□□ 0.52
SSH1-204ENST00000546697 EEF2P13639 858 aaKnown RBP18.28■□□□□ 0.52
SSH1-204ENST00000546697 MAPK4P31152 587 aa18.28■□□□□ 0.52
SSH1-204ENST00000546697 NOVP48745 357 aa18.28■□□□□ 0.52
SSH1-204ENST00000546697 PPARAQ07869 468 aa18.28■□□□□ 0.52
SSH1-204ENST00000546697 Q3C1V9 767 aa18.28■□□□□ 0.52
SSH1-204ENST00000546697 RAET1EQ8TD07 263 aa18.28■□□□□ 0.52
SSH1-204ENST00000546697 FAM227BQ96M60 508 aa18.28■□□□□ 0.52
SSH1-204ENST00000546697 NAPBQ9H115 298 aa18.28■□□□□ 0.52
SSH1-204ENST00000546697 MINDY4BA8MYZ0 360 aa18.27■□□□□ 0.52
SSH1-204ENST00000546697 XRCC5P13010 732 aaKnown RBP18.27■□□□□ 0.52
SSH1-204ENST00000546697 SDSP20132 328 aa18.27■□□□□ 0.52
SSH1-204ENST00000546697 PDE4AP27815 886 aa18.27■□□□□ 0.52
SSH1-204ENST00000546697 COG2Q14746 738 aa18.27■□□□□ 0.52
SSH1-204ENST00000546697 ZYXQ15942 572 aaKnown RBP18.27■□□□□ 0.52
SSH1-204ENST00000546697 MB21D1Q8N884 522 aa18.27■□□□□ 0.52
SSH1-204ENST00000546697 NEDD1Q8NHV4 660 aa18.27■□□□□ 0.52
SSH1-204ENST00000546697 MKNK2Q9HBH9 465 aa18.27■□□□□ 0.52
SSH1-204ENST00000546697 HOXC10Q9NYD6 342 aa18.27■□□□□ 0.52
SSH1-204ENST00000546697 POTEFA5A3E0 1075 aa18.26■□□□□ 0.51
SSH1-204ENST00000546697 APPP05067 770 aa18.26■□□□□ 0.51
SSH1-204ENST00000546697 PDE4BQ07343 736 aa18.26■□□□□ 0.51
SSH1-204ENST00000546697 VPS53Q5VIR6 699 aa18.26■□□□□ 0.51
SSH1-204ENST00000546697 CCDC129Q6ZRS4 1044 aa18.26■□□□□ 0.51
SSH1-204ENST00000546697 CLEC10AQ8IUN9 316 aa18.26■□□□□ 0.51
SSH1-204ENST00000546697 SH3TC2Q8TF17 1288 aa18.26■□□□□ 0.51
SSH1-204ENST00000546697 SOCS4Q8WXH5 440 aa18.26■□□□□ 0.51
SSH1-204ENST00000546697 ZNF236Q9UL36 1845 aa18.26■□□□□ 0.51
SSH1-204ENST00000546697 CCDC171Q6TFL3 1326 aa18.25■□□□□ 0.51
SSH1-204ENST00000546697 HIP1O00291 1037 aa18.25■□□□□ 0.51
SSH1-204ENST00000546697 ORC4O43929 436 aa18.25■□□□□ 0.51
SSH1-204ENST00000546697 ADCY3O60266 1144 aa18.25■□□□□ 0.51
SSH1-204ENST00000546697 IGHA2P01877 340 aa18.25■□□□□ 0.51
SSH1-204ENST00000546697 SLC3A2P08195 630 aaKnown RBP18.25■□□□□ 0.51
SSH1-204ENST00000546697 HSPD1P10809 573 aaKnown RBP18.25■□□□□ 0.51
SSH1-204ENST00000546697 DSG3P32926 999 aa18.25■□□□□ 0.51
SSH1-204ENST00000546697 NT5C2P49902 561 aa18.25■□□□□ 0.51
SSH1-204ENST00000546697 NMIQ13287 307 aaPredicted RBP18.25■□□□□ 0.51
SSH1-204ENST00000546697 MORN1Q5T089 497 aa18.25■□□□□ 0.51
SSH1-204ENST00000546697 ZNF589Q86UQ0 364 aaPredicted RBP18.25■□□□□ 0.51
SSH1-204ENST00000546697 MTMR4Q9NYA4 1195 aa18.25■□□□□ 0.51
SSH1-204ENST00000546697 BTBD7Q9P203 1132 aa18.25■□□□□ 0.51
SSH1-204ENST00000546697 FGAP02671 866 aa18.24■□□□□ 0.51
SSH1-204ENST00000546697 PCP11498 1178 aaKnown RBP18.24■□□□□ 0.51
SSH1-204ENST00000546697 CCNA1P78396 465 aa18.24■□□□□ 0.51
SSH1-204ENST00000546697 ZNF444Q8N0Y2 327 aaPredicted RBP18.24■□□□□ 0.51
SSH1-204ENST00000546697 SHCBP1Q8NEM2 672 aa18.24■□□□□ 0.51
SSH1-204ENST00000546697 PORCNQ9H237 461 aa18.24■□□□□ 0.51
SSH1-204ENST00000546697 GOPCQ9HD26 462 aa18.24■□□□□ 0.51
SSH1-204ENST00000546697 TRIM6-TRIM34B2RNG4 842 aa18.23■□□□□ 0.51
SSH1-204ENST00000546697 GJB1P08034 283 aa18.23■□□□□ 0.51
SSH1-204ENST00000546697 HOXC6P09630 235 aa18.23■□□□□ 0.51
SSH1-204ENST00000546697 MFAP1P55081 439 aaKnown RBP18.23■□□□□ 0.51
SSH1-204ENST00000546697 PPP4R3BQ5MIZ7 849 aa18.23■□□□□ 0.51
SSH1-204ENST00000546697 GPR142Q7Z601 462 aa18.23■□□□□ 0.51
SSH1-204ENST00000546697 GMCL1P1Q8NEA9 526 aa18.23■□□□□ 0.51
SSH1-204ENST00000546697 TMEM106CQ9BVX2 250 aa18.23■□□□□ 0.51
SSH1-204ENST00000546697 TACC3Q9Y6A5 838 aa18.23■□□□□ 0.51
SSH1-204ENST00000546697 PEX10O60683 326 aa18.22■□□□□ 0.51
SSH1-204ENST00000546697 TTLL1O95922 423 aa18.22■□□□□ 0.51
SSH1-204ENST00000546697 GSPT1P15170 499 aaKnown RBP18.22■□□□□ 0.51
SSH1-204ENST00000546697 UBXN2AP68543 259 aa18.22■□□□□ 0.51
SSH1-204ENST00000546697 TTC22Q5TAA0 569 aa18.22■□□□□ 0.51
SSH1-204ENST00000546697 MAP3K21Q5TCX8 1036 aa18.22■□□□□ 0.51
SSH1-204ENST00000546697 TRMT44Q8IYL2 757 aaKnown RBP18.22■□□□□ 0.51
SSH1-204ENST00000546697 CEP95Q96GE4 821 aa18.22■□□□□ 0.51
SSH1-204ENST00000546697 PAK6Q9NQU5 681 aaPredicted RBP18.22■□□□□ 0.51
SSH1-204ENST00000546697 F5H6K3 240 aa18.21■□□□□ 0.51
SSH1-204ENST00000546697 PRDM1O75626 825 aa18.21■□□□□ 0.51
SSH1-204ENST00000546697 HMGCRP04035 888 aa18.21■□□□□ 0.51
SSH1-204ENST00000546697 GJA8P48165 433 aa18.21■□□□□ 0.51
SSH1-204ENST00000546697 IRX6P78412 446 aaPredicted RBP18.21■□□□□ 0.51
SSH1-204ENST00000546697 KLRC3Q07444 240 aa18.21■□□□□ 0.51
SSH1-204ENST00000546697 GRB14Q14449 540 aa18.21■□□□□ 0.51
SSH1-204ENST00000546697 MTFR1Q15390 333 aa18.21■□□□□ 0.51
SSH1-204ENST00000546697 PLEKHH3Q7Z736 793 aa18.21■□□□□ 0.51
SSH1-204ENST00000546697 UBE2Q1Q7Z7E8 422 aa18.21■□□□□ 0.51
SSH1-204ENST00000546697 REPS2Q8NFH8 660 aa18.21■□□□□ 0.51
SSH1-204ENST00000546697 NKX2-3Q8TAU0 364 aa18.21■□□□□ 0.51
SSH1-204ENST00000546697 RILPL2Q969X0 211 aa18.21■□□□□ 0.51
SSH1-204ENST00000546697 NUDT12Q9BQG2 462 aa18.21■□□□□ 0.51
SSH1-204ENST00000546697 PPP1R9AQ9ULJ8 1098 aa18.21■□□□□ 0.51
SSH1-204ENST00000546697 PDE4DIPQ5VU43 2346 aa18.21■□□□□ 0.51
SSH1-204ENST00000546697 MYH4Q9Y623 1939 aa18.2■□□□□ 0.5
SSH1-204ENST00000546697 SLC15A5A6NIM6 579 aa18.2■□□□□ 0.5
SSH1-204ENST00000546697 STRNO43815 780 aa18.2■□□□□ 0.5
SSH1-204ENST00000546697 INHAP05111 366 aa18.2■□□□□ 0.5
SSH1-204ENST00000546697 PTPREP23469 700 aa18.2■□□□□ 0.5
SSH1-204ENST00000546697 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.2■□□□□ 0.5
SSH1-204ENST00000546697 ABRAQ8N0Z2 381 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms