RNA–Protein interactions for RNA: ENST00000546590.2

TMTC2-202, Transcript of transmembrane and tetratricopeptide repeat containing 2, humanhuman

TSL 1 (best)

Gene TMTC2, Length 4,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMTC2-202ENST00000546590 PARP10Q53GL7 1025 aa9.54□□□□□ -0.88
TMTC2-202ENST00000546590 E4F1Q66K89 784 aaPredicted RBP9.54□□□□□ -0.88
TMTC2-202ENST00000546590 ERO1AQ96HE7 468 aa9.54□□□□□ -0.88
TMTC2-202ENST00000546590 SLC39A2Q9NP94 309 aa9.54□□□□□ -0.88
TMTC2-202ENST00000546590 TNS3Q68CZ2 1445 aa9.53□□□□□ -0.88
TMTC2-202ENST00000546590 SLURP2P0DP57 97 aa9.53□□□□□ -0.88
TMTC2-202ENST00000546590 EARS2Q5JPH6 523 aaKnown RBP9.53□□□□□ -0.88
TMTC2-202ENST00000546590 MFSD14BQ5SR56 506 aa9.53□□□□□ -0.88
TMTC2-202ENST00000546590 MAEAQ7L5Y9 396 aa9.53□□□□□ -0.88
TMTC2-202ENST00000546590 KCNB2Q92953 911 aa9.53□□□□□ -0.88
TMTC2-202ENST00000546590 COA7Q96BR5 231 aa9.53□□□□□ -0.88
TMTC2-202ENST00000546590 NLRC4Q9NPP4 1024 aa9.53□□□□□ -0.88
TMTC2-202ENST00000546590 MINPP1Q9UNW1 487 aa9.53□□□□□ -0.88
TMTC2-202ENST00000546590 CCZ1BP86790 482 aa9.53□□□□□ -0.88
TMTC2-202ENST00000546590 CCZ1P86791 482 aaPredicted RBP9.53□□□□□ -0.88
TMTC2-202ENST00000546590 CUL4BQ13620 913 aa9.53□□□□□ -0.88
TMTC2-202ENST00000546590 USH1GQ495M9 461 aa9.53□□□□□ -0.88
TMTC2-202ENST00000546590 CPDO75976 1380 aa9.53□□□□□ -0.88
TMTC2-202ENST00000546590 RTL9Q8NET4 1388 aa9.53□□□□□ -0.88
TMTC2-202ENST00000546590 KMT5BQ4FZB7 885 aa9.53□□□□□ -0.88
TMTC2-202ENST00000546590 FAM196AQ6ZSG2 479 aa9.53□□□□□ -0.88
TMTC2-202ENST00000546590 LRP10Q7Z4F1 713 aa9.53□□□□□ -0.88
TMTC2-202ENST00000546590 FCHSD1Q86WN1 690 aa9.53□□□□□ -0.88
TMTC2-202ENST00000546590 CSGALNACT2Q8N6G5 542 aa9.53□□□□□ -0.88
TMTC2-202ENST00000546590 NEK11Q8NG66 645 aa9.53□□□□□ -0.88
TMTC2-202ENST00000546590 NRXN3Q9Y4C0 1643 aa9.53□□□□□ -0.88
TMTC2-202ENST00000546590 PXDNLA1KZ92 1463 aa9.53□□□□□ -0.88
TMTC2-202ENST00000546590 VIRMAQ69YN4 1812 aaKnown RBP9.53□□□□□ -0.88
TMTC2-202ENST00000546590 ECM2O94769 699 aaPredicted RBP9.52□□□□□ -0.88
TMTC2-202ENST00000546590 CALM1P0DP23 149 aa9.52□□□□□ -0.88
TMTC2-202ENST00000546590 CALM2P0DP24 149 aa9.52□□□□□ -0.88
TMTC2-202ENST00000546590 CALM3P0DP25 149 aa9.52□□□□□ -0.88
TMTC2-202ENST00000546590 CYP27A1Q02318 531 aa9.52□□□□□ -0.88
TMTC2-202ENST00000546590 TBC1D8BQ0IIM8 1120 aa9.52□□□□□ -0.88
TMTC2-202ENST00000546590 BMS1Q14692 1282 aaKnown RBP9.52□□□□□ -0.88
TMTC2-202ENST00000546590 CCDC122Q5T0U0 273 aa9.52□□□□□ -0.88
TMTC2-202ENST00000546590 TRAPPC3LQ5T215 181 aa9.52□□□□□ -0.88
TMTC2-202ENST00000546590 KANK3Q6NY19 840 aa9.52□□□□□ -0.88
TMTC2-202ENST00000546590 FOXP4Q8IVH2 680 aaPredicted RBP9.52□□□□□ -0.88
TMTC2-202ENST00000546590 CCDC43Q96MW1 224 aaKnown RBP9.52□□□□□ -0.88
TMTC2-202ENST00000546590 WDR24Q96S15 920 aa9.52□□□□□ -0.88
TMTC2-202ENST00000546590 FAM107BQ9H098 131 aa9.52□□□□□ -0.88
TMTC2-202ENST00000546590 C3P01024 1663 aa9.52□□□□□ -0.88
TMTC2-202ENST00000546590 MARCH10Q8NA82 808 aaPredicted RBP9.52□□□□□ -0.89
TMTC2-202ENST00000546590 ARFGAP3Q9NP61 516 aa9.52□□□□□ -0.89
TMTC2-202ENST00000546590 SPTLC3Q9NUV7 552 aa9.52□□□□□ -0.89
TMTC2-202ENST00000546590 VPS18Q9P253 973 aa9.52□□□□□ -0.89
TMTC2-202ENST00000546590 TCEAL9Q9UHQ7 104 aa9.52□□□□□ -0.89
TMTC2-202ENST00000546590 KLRF2D3W0D1 207 aa9.52□□□□□ -0.89
TMTC2-202ENST00000546590 CHMP2AO43633 222 aa9.52□□□□□ -0.89
TMTC2-202ENST00000546590 SCG2P13521 617 aa9.52□□□□□ -0.89
TMTC2-202ENST00000546590 RBM6P78332 1123 aaKnown RBP9.52□□□□□ -0.89
TMTC2-202ENST00000546590 SPA17Q15506 151 aa9.52□□□□□ -0.89
TMTC2-202ENST00000546590 MLKLQ8NB16 471 aa9.52□□□□□ -0.89
TMTC2-202ENST00000546590 SH3RF3Q8TEJ3 882 aaPredicted RBP9.52□□□□□ -0.89
TMTC2-202ENST00000546590 CALML4Q96GE6 196 aa9.52□□□□□ -0.89
TMTC2-202ENST00000546590 RUFY1Q96T51 708 aa9.52□□□□□ -0.89
TMTC2-202ENST00000546590 NBPF3Q9H094 633 aa9.52□□□□□ -0.89
TMTC2-202ENST00000546590 SCAF8Q9UPN6 1271 aaKnown RBP9.52□□□□□ -0.89
TMTC2-202ENST00000546590 ZNF804BA4D1E1 1349 aa9.52□□□□□ -0.89
TMTC2-202ENST00000546590 PSMA7O14818 248 aa9.52□□□□□ -0.89
TMTC2-202ENST00000546590 CSF1RP07333 972 aa9.52□□□□□ -0.89
TMTC2-202ENST00000546590 PAK1Q13153 545 aa9.52□□□□□ -0.89
TMTC2-202ENST00000546590 MXD3Q9BW11 206 aa9.52□□□□□ -0.89
TMTC2-202ENST00000546590 ZBTB21Q9ULJ3 1066 aa9.52□□□□□ -0.89
TMTC2-202ENST00000546590 LUC7L2Q9Y383 392 aaKnown RBP9.52□□□□□ -0.89
TMTC2-202ENST00000546590 PIK3C2AO00443 1686 aa9.51□□□□□ -0.89
TMTC2-202ENST00000546590 PALLDQ8WX93 1383 aa9.51□□□□□ -0.89
TMTC2-202ENST00000546590 SMCO2A6NFE2 343 aa9.51□□□□□ -0.89
TMTC2-202ENST00000546590 KIAA0825Q8IV33 1275 aa9.51□□□□□ -0.89
TMTC2-202ENST00000546590 FAM84BQ96KN1 310 aaPredicted RBP9.51□□□□□ -0.89
TMTC2-202ENST00000546590 ANKRD26Q9UPS8 1709 aa9.51□□□□□ -0.89
TMTC2-202ENST00000546590 A0A0U1RQJ8 604 aa9.51□□□□□ -0.89
TMTC2-202ENST00000546590 ANKRD65E5RJM6 399 aa9.51□□□□□ -0.89
TMTC2-202ENST00000546590 ARHGAP6O43182 974 aa9.51□□□□□ -0.89
TMTC2-202ENST00000546590 SPICE1Q8N0Z3 855 aa9.51□□□□□ -0.89
TMTC2-202ENST00000546590 ATRIPQ8WXE1 791 aa9.51□□□□□ -0.89
TMTC2-202ENST00000546590 EYA3Q99504 573 aa9.51□□□□□ -0.89
TMTC2-202ENST00000546590 CTAGE9A4FU28 777 aa9.51□□□□□ -0.89
TMTC2-202ENST00000546590 B4DLN1 442 aa9.51□□□□□ -0.89
TMTC2-202ENST00000546590 PARP1P09874 1014 aaKnown RBP9.51□□□□□ -0.89
TMTC2-202ENST00000546590 CXCR5P32302 372 aa9.51□□□□□ -0.89
TMTC2-202ENST00000546590 USP8P40818 1118 aa9.51□□□□□ -0.89
TMTC2-202ENST00000546590 BTDP43251 543 aa9.51□□□□□ -0.89
TMTC2-202ENST00000546590 NFIXQ14938 502 aa9.51□□□□□ -0.89
TMTC2-202ENST00000546590 CCDC70Q6NSX1 233 aa9.51□□□□□ -0.89
TMTC2-202ENST00000546590 BLIDQ8IZY5 108 aa9.51□□□□□ -0.89
TMTC2-202ENST00000546590 ZC3H12CQ9C0D7 883 aaKnown RBP9.51□□□□□ -0.89
TMTC2-202ENST00000546590 OGFRQ9NZT2 677 aa9.51□□□□□ -0.89
TMTC2-202ENST00000546590 SRGAP2O75044 1071 aa9.5□□□□□ -0.89
TMTC2-202ENST00000546590 NOP2P46087 812 aaKnown RBP9.5□□□□□ -0.89
TMTC2-202ENST00000546590 RBM26Q5T8P6 1007 aaKnown RBP9.5□□□□□ -0.89
TMTC2-202ENST00000546590 RESP18Q5W5W9 173 aa9.5□□□□□ -0.89
TMTC2-202ENST00000546590 CTR9Q6PD62 1173 aa9.5□□□□□ -0.89
TMTC2-202ENST00000546590 SRBD1Q8N5C6 995 aaKnown RBP9.5□□□□□ -0.89
TMTC2-202ENST00000546590 PAGE5Q96GU1 130 aa9.5□□□□□ -0.89
TMTC2-202ENST00000546590 NOC4LQ9BVI4 516 aaKnown RBP9.5□□□□□ -0.89
TMTC2-202ENST00000546590 FOXP2O15409 715 aa9.5□□□□□ -0.89
TMTC2-202ENST00000546590 UBXN2AP68543 259 aa9.5□□□□□ -0.89
TMTC2-202ENST00000546590 ZFYVE27Q5T4F4 411 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms