RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 TIMM10P62072 90 aa19.09■□□□□ 0.65
CLSTN3-216ENST00000545663 PPIGQ13427 754 aaKnown RBP eCLIP19.09■□□□□ 0.654e-7■■□□□ 12.8
CLSTN3-216ENST00000545663 TOX2Q96NM4 488 aa19.09■□□□□ 0.65
CLSTN3-216ENST00000545663 CACNA1AO00555 2505 aa19.08■□□□□ 0.65
CLSTN3-216ENST00000545663 GH2P01242 217 aa19.08■□□□□ 0.64
CLSTN3-216ENST00000545663 RARBP10826 455 aa19.08■□□□□ 0.64
CLSTN3-216ENST00000545663 TAL1P17542 331 aaPredicted RBP19.08■□□□□ 0.64
CLSTN3-216ENST00000545663 VCAM1P19320 739 aa19.08■□□□□ 0.64
CLSTN3-216ENST00000545663 PI16Q6UXB8 463 aa19.08■□□□□ 0.64
CLSTN3-216ENST00000545663 LBX2Q6XYB7 198 aa19.08■□□□□ 0.64
CLSTN3-216ENST00000545663 RNF180Q86T96 592 aa19.08■□□□□ 0.64
CLSTN3-216ENST00000545663 MAPKAPK5Q8IW41 473 aa19.08■□□□□ 0.64
CLSTN3-216ENST00000545663 HERVK_113Q902F9 699 aa19.08■□□□□ 0.64
CLSTN3-216ENST00000545663 C12orf42Q96LP6 360 aa19.08■□□□□ 0.64
CLSTN3-216ENST00000545663 PALD1Q9ULE6 856 aa19.08■□□□□ 0.64
CLSTN3-216ENST00000545663 SMCHD1A6NHR9 2005 aa19.08■□□□□ 0.64
CLSTN3-216ENST00000545663 KRT40Q6A162 431 aa19.07■□□□□ 0.64
CLSTN3-216ENST00000545663 METTL16Q86W50 562 aaKnown RBP19.07■□□□□ 0.64
CLSTN3-216ENST00000545663 CRACR2BQ8N4Y2 399 aaPredicted RBP19.07■□□□□ 0.64
CLSTN3-216ENST00000545663 ACER1Q8TDN7 264 aa19.07■□□□□ 0.64
CLSTN3-216ENST00000545663 FEZ1Q99689 392 aa19.07■□□□□ 0.64
CLSTN3-216ENST00000545663 DHX36Q9H2U1 1008 aaKnown RBP19.07■□□□□ 0.64
CLSTN3-216ENST00000545663 PRRC2BQ5JSZ5 2229 aaKnown RBP19.06■□□□□ 0.64
CLSTN3-216ENST00000545663 PDS5AQ29RF7 1337 aaKnown RBP19.06■□□□□ 0.64
CLSTN3-216ENST00000545663 PI4K2BG5E9Z4 385 aa19.06■□□□□ 0.64
CLSTN3-216ENST00000545663 ZBTB22O15209 634 aa19.06■□□□□ 0.64
CLSTN3-216ENST00000545663 STRNO43815 780 aa19.06■□□□□ 0.64
CLSTN3-216ENST00000545663 MAP4K4O95819 1239 aaPredicted RBP19.06■□□□□ 0.64
CLSTN3-216ENST00000545663 LDHCP07864 332 aa19.06■□□□□ 0.64
CLSTN3-216ENST00000545663 ERCC3P19447 782 aa19.06■□□□□ 0.64
CLSTN3-216ENST00000545663 NHLH1Q02575 133 aa19.06■□□□□ 0.64
CLSTN3-216ENST00000545663 FOXP4Q8IVH2 680 aaPredicted RBP19.06■□□□□ 0.64
CLSTN3-216ENST00000545663 MAML3Q96JK9 1138 aa19.06■□□□□ 0.64
CLSTN3-216ENST00000545663 PPP1R12CQ9BZL4 782 aa19.06■□□□□ 0.64
CLSTN3-216ENST00000545663 STARD7Q9NQZ5 370 aa19.06■□□□□ 0.64
CLSTN3-216ENST00000545663 SALL2Q9Y467 1007 aaPredicted RBP19.06■□□□□ 0.64
CLSTN3-216ENST00000545663 CIAO1O76071 339 aa19.05■□□□□ 0.64
CLSTN3-216ENST00000545663 ACLYP53396 1101 aa19.05■□□□□ 0.64
CLSTN3-216ENST00000545663 GSTO1P78417 241 aa19.05■□□□□ 0.64
CLSTN3-216ENST00000545663 CCDC174Q6PII3 467 aa19.05■□□□□ 0.64
CLSTN3-216ENST00000545663 TGFBRAP1Q8WUH2 860 aa19.05■□□□□ 0.64
CLSTN3-216ENST00000545663 TRIM34Q9BYJ4 488 aa19.05■□□□□ 0.64
CLSTN3-216ENST00000545663 RPAP3Q9H6T3 665 aaPredicted RBP19.05■□□□□ 0.64
CLSTN3-216ENST00000545663 GINM1Q9NU53 330 aa19.05■□□□□ 0.64
CLSTN3-216ENST00000545663 RAI14Q9P0K7 980 aa19.05■□□□□ 0.64
CLSTN3-216ENST00000545663 SAP30BPQ9UHR5 308 aaKnown RBP19.05■□□□□ 0.64
CLSTN3-216ENST00000545663 PA2G4Q9UQ80 394 aaKnown RBP19.05■□□□□ 0.64
CLSTN3-216ENST00000545663 MTCH2Q9Y6C9 303 aa19.05■□□□□ 0.64
CLSTN3-216ENST00000545663 USP34Q70CQ2 3546 aa19.04■□□□□ 0.64
CLSTN3-216ENST00000545663 APBB1O00213 710 aa19.04■□□□□ 0.64
CLSTN3-216ENST00000545663 TMEM199Q8N511 208 aa19.04■□□□□ 0.64
CLSTN3-216ENST00000545663 HMG20BQ9P0W2 317 aa19.04■□□□□ 0.64
CLSTN3-216ENST00000545663 GBF1Q92538 1859 aa19.03■□□□□ 0.64
CLSTN3-216ENST00000545663 LRRC37A2A6NM11 1700 aa19.03■□□□□ 0.64
CLSTN3-216ENST00000545663 ADAMTS4O75173 837 aa19.03■□□□□ 0.64
CLSTN3-216ENST00000545663 IRX5P78411 483 aaPredicted RBP19.03■□□□□ 0.64
CLSTN3-216ENST00000545663 PPP2R2DQ66LE6 453 aa19.03■□□□□ 0.64
CLSTN3-216ENST00000545663 PSRC1Q6PGN9 363 aaPredicted RBP19.03■□□□□ 0.64
CLSTN3-216ENST00000545663 OTOP2Q7RTS6 562 aa19.03■□□□□ 0.64
CLSTN3-216ENST00000545663 UIMC1Q96RL1 719 aa19.03■□□□□ 0.64
CLSTN3-216ENST00000545663 SPATC1LQ9H0A9 340 aa19.03■□□□□ 0.64
CLSTN3-216ENST00000545663 AATFQ9NY61 560 aaKnown RBP eCLIP19.03■□□□□ 0.64
CLSTN3-216ENST00000545663 CFAP54Q96N23 3096 aa19.03■□□□□ 0.64
CLSTN3-216ENST00000545663 FLT1P17948 1338 aa19.02■□□□□ 0.64
CLSTN3-216ENST00000545663 CYP2C18P33260 490 aa19.02■□□□□ 0.64
CLSTN3-216ENST00000545663 RAB3GAP1Q15042 981 aa19.02■□□□□ 0.64
CLSTN3-216ENST00000545663 KCNA10Q16322 511 aa19.02■□□□□ 0.64
CLSTN3-216ENST00000545663 CDCA7LQ96GN5 454 aa19.02■□□□□ 0.64
CLSTN3-216ENST00000545663 XAGE2Q96GT9 111 aa19.02■□□□□ 0.64
CLSTN3-216ENST00000545663 KIAA1683Q9H0B3 1180 aa19.02■□□□□ 0.64
CLSTN3-216ENST00000545663 PRKRIP1Q9H875 184 aaPredicted RBP19.02■□□□□ 0.64
CLSTN3-216ENST00000545663 CERS4Q9HA82 394 aa19.02■□□□□ 0.64
CLSTN3-216ENST00000545663 IL23AQ9NPF7 189 aa19.02■□□□□ 0.64
CLSTN3-216ENST00000545663 ZNF236Q9UL36 1845 aa19.02■□□□□ 0.63
CLSTN3-216ENST00000545663 PRR33A8MZF0 331 aa19.01■□□□□ 0.63
CLSTN3-216ENST00000545663 FGBP02675 491 aa19.01■□□□□ 0.63
CLSTN3-216ENST00000545663 IL15P40933 162 aaPredicted RBP19.01■□□□□ 0.63
CLSTN3-216ENST00000545663 CDK7P50613 346 aa19.01■□□□□ 0.63
CLSTN3-216ENST00000545663 SLC5A4Q9NY91 659 aa19.01■□□□□ 0.63
CLSTN3-216ENST00000545663 COG5Q9UP83 839 aa19.01■□□□□ 0.63
CLSTN3-216ENST00000545663 ZNF521Q96K83 1311 aa19■□□□□ 0.63
CLSTN3-216ENST00000545663 MYADML2A6NDP7 307 aa19■□□□□ 0.63
CLSTN3-216ENST00000545663 EPOPA6NHQ4 379 aa19■□□□□ 0.63
CLSTN3-216ENST00000545663 PGK2P07205 417 aa19■□□□□ 0.63
CLSTN3-216ENST00000545663 ZNF865P0CJ78 1059 aaPredicted RBP19■□□□□ 0.63
CLSTN3-216ENST00000545663 USP14P54578 494 aa19■□□□□ 0.63
CLSTN3-216ENST00000545663 CCSAPQ6IQ19 270 aaPredicted RBP19■□□□□ 0.63
CLSTN3-216ENST00000545663 NCAPG2Q86XI2 1143 aa19■□□□□ 0.63
CLSTN3-216ENST00000545663 SPATA5Q8NB90 893 aa19■□□□□ 0.63
CLSTN3-216ENST00000545663 NUP133Q8WUM0 1156 aa19■□□□□ 0.63
CLSTN3-216ENST00000545663 TSEN34Q9BSV6 310 aaKnown RBP19■□□□□ 0.63
CLSTN3-216ENST00000545663 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19■□□□□ 0.63
CLSTN3-216ENST00000545663 SYNRGQ9UMZ2 1314 aa19■□□□□ 0.63
CLSTN3-216ENST00000545663 PLS1Q14651 629 aa18.99■□□□□ 0.63
CLSTN3-216ENST00000545663 ADGRA1Q86SQ6 560 aa18.99■□□□□ 0.63
CLSTN3-216ENST00000545663 SHCBP1Q8NEM2 672 aa18.99■□□□□ 0.63
CLSTN3-216ENST00000545663 HLA-CQ95604 372 aa18.99■□□□□ 0.63
CLSTN3-216ENST00000545663 FBXL18Q96ME1 805 aa18.99■□□□□ 0.63
CLSTN3-216ENST00000545663 FBXO3Q9UK99 471 aa18.99■□□□□ 0.63
CLSTN3-216ENST00000545663 A0A1B0GUL7 405 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms