RNA–Protein interactions for RNA: ENST00000545621.5

HMBS-222, Transcript of hydroxymethylbilane synthase, human

TSL 1 (best)

Gene HMBS, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMBS-222	ENST00000545621	SMCR8	Q8TEV9	937 aa	Predicted RBP	18.98	■□□□□ 0.63
HMBS-222	ENST00000545621	CEP95	Q96GE4	821 aa		18.98	■□□□□ 0.63
HMBS-222	ENST00000545621	MCOLN1	Q9GZU1	580 aa		18.98	■□□□□ 0.63
HMBS-222	ENST00000545621	INCENP	Q9NQS7	918 aa		18.98	■□□□□ 0.63
HMBS-222	ENST00000545621	MTMR4	Q9NYA4	1195 aa		18.98	■□□□□ 0.63
HMBS-222	ENST00000545621	TSPY3	P0CV98	308 aa		18.97	■□□□□ 0.63
HMBS-222	ENST00000545621	TSPY8	P0CW00	308 aa		18.97	■□□□□ 0.63
HMBS-222	ENST00000545621	NT5C2	P49902	561 aa		18.97	■□□□□ 0.63
HMBS-222	ENST00000545621	HAND2	P61296	217 aa		18.97	■□□□□ 0.63
HMBS-222	ENST00000545621	HERVK_113	P62684	666 aa		18.97	■□□□□ 0.63
HMBS-222	ENST00000545621	IRX3	P78415	501 aa	Predicted RBP	18.97	■□□□□ 0.63
HMBS-222	ENST00000545621	TFAP4	Q01664	338 aa		18.97	■□□□□ 0.63
HMBS-222	ENST00000545621	AKNAD1	Q5T1N1	836 aa		18.97	■□□□□ 0.63
HMBS-222	ENST00000545621	LBX2	Q6XYB7	198 aa		18.97	■□□□□ 0.63
HMBS-222	ENST00000545621	OTOP1	Q7RTM1	612 aa		18.97	■□□□□ 0.63
HMBS-222	ENST00000545621	TBC1D10C	Q8IV04	446 aa		18.97	■□□□□ 0.63
HMBS-222	ENST00000545621	P2RX7	Q99572	595 aa	Known RBP	18.97	■□□□□ 0.63
HMBS-222	ENST00000545621	MORF4L1	Q9UBU8	362 aa		18.97	■□□□□ 0.63
HMBS-222	ENST00000545621	CTNNA3	Q9UI47	895 aa		18.97	■□□□□ 0.63
HMBS-222	ENST00000545621	RBBP6	Q7Z6E9	1792 aa	Known RBP	18.96	■□□□□ 0.63
HMBS-222	ENST00000545621	CTGF	P29279	349 aa		18.96	■□□□□ 0.63
HMBS-222	ENST00000545621	FAM47A	Q5JRC9	791 aa		18.96	■□□□□ 0.63
HMBS-222	ENST00000545621	POTEE	Q6S8J3	1075 aa		18.96	■□□□□ 0.63
HMBS-222	ENST00000545621	GTF3C2	Q8WUA4	911 aa	Predicted RBP	18.96	■□□□□ 0.63
HMBS-222	ENST00000545621	RPAP3	Q9H6T3	665 aa	Predicted RBP	18.96	■□□□□ 0.63
HMBS-222	ENST00000545621	IL17RB	Q9NRM6	502 aa		18.96	■□□□□ 0.63
HMBS-222	ENST00000545621	MYH6	P13533	1939 aa		18.96	■□□□□ 0.63
HMBS-222	ENST00000545621	SMCHD1	A6NHR9	2005 aa		18.95	■□□□□ 0.62
HMBS-222	ENST00000545621	ZNF213	O14771	459 aa		18.95	■□□□□ 0.62
HMBS-222	ENST00000545621	WDR46	O15213	610 aa	Known RBP	18.95	■□□□□ 0.62
HMBS-222	ENST00000545621	TTLL1	O95922	423 aa		18.95	■□□□□ 0.62
HMBS-222	ENST00000545621	GNRH1	P01148	92 aa		18.95	■□□□□ 0.62
HMBS-222	ENST00000545621	PTH1R	Q03431	593 aa		18.95	■□□□□ 0.62
HMBS-222	ENST00000545621	MAP4K1	Q92918	833 aa		18.95	■□□□□ 0.62
HMBS-222	ENST00000545621	ESYT1	Q9BSJ8	1104 aa		18.95	■□□□□ 0.62
HMBS-222	ENST00000545621	RNF41	Q9H4P4	317 aa	Predicted RBP	18.95	■□□□□ 0.62
HMBS-222	ENST00000545621	GOPC	Q9HD26	462 aa		18.95	■□□□□ 0.62
HMBS-222	ENST00000545621	TCP11L1	Q9NUJ3	509 aa		18.95	■□□□□ 0.62
HMBS-222	ENST00000545621	TSPY2	A6NKD2	308 aa		18.94	■□□□□ 0.62
HMBS-222	ENST00000545621	ARHGEF6	Q15052	776 aa		18.94	■□□□□ 0.62
HMBS-222	ENST00000545621	IMMT	Q16891	758 aa	Known RBP	18.94	■□□□□ 0.62
HMBS-222	ENST00000545621	PPP4R3B	Q5MIZ7	849 aa		18.94	■□□□□ 0.62
HMBS-222	ENST00000545621	FBXO46	Q6PJ61	603 aa	Predicted RBP	18.94	■□□□□ 0.62
HMBS-222	ENST00000545621	MFSD6	Q6ZSS7	791 aa		18.94	■□□□□ 0.62
HMBS-222	ENST00000545621	ANKRD13C	Q8N6S4	541 aa		18.94	■□□□□ 0.62
HMBS-222	ENST00000545621	NKX2-3	Q8TAU0	364 aa		18.94	■□□□□ 0.62
HMBS-222	ENST00000545621	ARHGAP39	Q9C0H5	1083 aa		18.94	■□□□□ 0.62
HMBS-222	ENST00000545621	EFCC1	Q9HA90	598 aa		18.94	■□□□□ 0.62
HMBS-222	ENST00000545621	TRIM17	Q9Y577	477 aa		18.94	■□□□□ 0.62
HMBS-222	ENST00000545621	NEDD4	P46934	1319 aa		18.94	■□□□□ 0.62
HMBS-222	ENST00000545621	MYPN	Q86TC9	1320 aa		18.94	■□□□□ 0.62
HMBS-222	ENST00000545621	PLXNA1	Q9UIW2	1896 aa		18.93	■□□□□ 0.62
HMBS-222	ENST00000545621	SPDYE16	A6NNV3	312 aa	Predicted RBP	18.93	■□□□□ 0.62
HMBS-222	ENST00000545621	RANBP6	O60518	1105 aa	Known RBP	18.93	■□□□□ 0.62
HMBS-222	ENST00000545621	KIF22	Q14807	665 aa		18.93	■□□□□ 0.62
HMBS-222	ENST00000545621	GMCL1P1	Q8NEA9	526 aa		18.93	■□□□□ 0.62
HMBS-222	ENST00000545621	TRIM47	Q96LD4	638 aa		18.93	■□□□□ 0.62
HMBS-222	ENST00000545621	TXNRD2	Q9NNW7	524 aa		18.93	■□□□□ 0.62
HMBS-222	ENST00000545621	RBPJL	Q9UBG7	517 aa		18.93	■□□□□ 0.62
HMBS-222	ENST00000545621	CLIP2	Q9UDT6	1046 aa		18.93	■□□□□ 0.62
HMBS-222	ENST00000545621	ZNF236	Q9UL36	1845 aa		18.93	■□□□□ 0.62
HMBS-222	ENST00000545621	KIAA0100	Q14667	2235 aa	Known RBP	18.92	■□□□□ 0.62
HMBS-222	ENST00000545621		F5H6K3	240 aa		18.92	■□□□□ 0.62
HMBS-222	ENST00000545621	PSMC4	P43686	418 aa		18.92	■□□□□ 0.62
HMBS-222	ENST00000545621	ATP2B2	Q01814	1243 aa		18.92	■□□□□ 0.62
HMBS-222	ENST00000545621	KLRC3	Q07444	240 aa		18.92	■□□□□ 0.62
HMBS-222	ENST00000545621	COG2	Q14746	738 aa		18.92	■□□□□ 0.62
HMBS-222	ENST00000545621	SPICE1	Q8N0Z3	855 aa		18.92	■□□□□ 0.62
HMBS-222	ENST00000545621	LSG1	Q9H089	658 aa	Known RBP	18.92	■□□□□ 0.62
HMBS-222	ENST00000545621		U3KPZ7	1027 aa	Predicted RBP	18.92	■□□□□ 0.62
HMBS-222	ENST00000545621	NMT2	O60551	498 aa		18.91	■□□□□ 0.62
HMBS-222	ENST00000545621	NDUFB10	O96000	172 aa		18.91	■□□□□ 0.62
HMBS-222	ENST00000545621	CYP21A2	P08686	494 aa		18.91	■□□□□ 0.62
HMBS-222	ENST00000545621	HOXC10	Q9NYD6	342 aa		18.91	■□□□□ 0.62
HMBS-222	ENST00000545621	ADAMTS5	Q9UNA0	930 aa		18.91	■□□□□ 0.62
HMBS-222	ENST00000545621	PTPN22	Q9Y2R2	807 aa		18.91	■□□□□ 0.62
HMBS-222	ENST00000545621	RABGAP1	Q9Y3P9	1069 aa		18.91	■□□□□ 0.62
HMBS-222	ENST00000545621	CDC45	O75419	566 aa		18.9	■□□□□ 0.62
HMBS-222	ENST00000545621	CNMD	O75829	334 aa		18.9	■□□□□ 0.62
HMBS-222	ENST00000545621	DSG3	P32926	999 aa		18.9	■□□□□ 0.62
HMBS-222	ENST00000545621	PRMT2	P55345	433 aa		18.9	■□□□□ 0.62
HMBS-222	ENST00000545621	FCGRT	P55899	365 aa		18.9	■□□□□ 0.62
HMBS-222	ENST00000545621	ERVK-9	P63128	1117 aa		18.9	■□□□□ 0.62
HMBS-222	ENST00000545621	ERVK-24	P63145	666 aa		18.9	■□□□□ 0.62
HMBS-222	ENST00000545621	RRP12	Q5JTH9	1297 aa	Known RBP	18.9	■□□□□ 0.62
HMBS-222	ENST00000545621	RCSD1	Q6JBY9	416 aa		18.9	■□□□□ 0.62
HMBS-222	ENST00000545621	ESR2	Q92731	530 aa		18.9	■□□□□ 0.62
HMBS-222	ENST00000545621	ABHD8	Q96I13	439 aa		18.9	■□□□□ 0.62
HMBS-222	ENST00000545621	TANGO6	Q9C0B7	1094 aa		18.9	■□□□□ 0.62
HMBS-222	ENST00000545621		Q3C1V9	767 aa		18.89	■□□□□ 0.61
HMBS-222	ENST00000545621	LRRC47	Q8N1G4	583 aa	Known RBP	18.89	■□□□□ 0.61
HMBS-222	ENST00000545621	GPRC5A	Q8NFJ5	357 aa		18.89	■□□□□ 0.61
HMBS-222	ENST00000545621	TTC14	Q96N46	770 aa		18.89	■□□□□ 0.61
HMBS-222	ENST00000545621	CNNM2	Q9H8M5	875 aa		18.89	■□□□□ 0.61
HMBS-222	ENST00000545621	TOMM22	Q9NS69	142 aa		18.89	■□□□□ 0.61
HMBS-222	ENST00000545621	SRRD	Q9UH36	339 aa		18.89	■□□□□ 0.61
HMBS-222	ENST00000545621	BRCA2	P51587	3418 aa		18.89	■□□□□ 0.61
HMBS-222	ENST00000545621		B4E1Z4	1266 aa		18.88	■□□□□ 0.61
HMBS-222	ENST00000545621	PEX10	O60683	326 aa		18.88	■□□□□ 0.61
HMBS-222	ENST00000545621	FLOT1	O75955	427 aa		18.88	■□□□□ 0.61

Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms