RNA–Protein interactions for RNA: ENST00000545425.2

FOXA1-202, Transcript of forkhead box A1, humanhuman

TSL 2

Gene FOXA1, Length 1,806 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-202ENST00000545425 CDK11BP21127 795 aaKnown RBP26.48■■□□□ 1.83
FOXA1-202ENST00000545425 PKN1Q16512 942 aa26.48■■□□□ 1.83
FOXA1-202ENST00000545425 SH3RF1Q7Z6J0 888 aa26.48■■□□□ 1.83
FOXA1-202ENST00000545425 FBXO33Q7Z6M2 555 aa26.48■■□□□ 1.83
FOXA1-202ENST00000545425 HOMER1Q86YM7 354 aa26.48■■□□□ 1.83
FOXA1-202ENST00000545425 DPF2Q92785 391 aa26.48■■□□□ 1.83
FOXA1-202ENST00000545425 LAMB1P07942 1786 aa26.48■■□□□ 1.83
FOXA1-202ENST00000545425 NR5A1Q13285 461 aa26.47■■□□□ 1.83
FOXA1-202ENST00000545425 SBK1Q52WX2 424 aa26.47■■□□□ 1.83
FOXA1-202ENST00000545425 TMTC3Q6ZXV5 915 aa26.47■■□□□ 1.83
FOXA1-202ENST00000545425 CSRNP2Q9H175 543 aa26.47■■□□□ 1.83
FOXA1-202ENST00000545425 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.47■■□□□ 1.83
FOXA1-202ENST00000545425 TM4SF1P30408 202 aa26.46■■□□□ 1.83
FOXA1-202ENST00000545425 TROAPQ12815 778 aa26.46■■□□□ 1.83
FOXA1-202ENST00000545425 SYT10Q6XYQ8 523 aa26.46■■□□□ 1.83
FOXA1-202ENST00000545425 NAA15Q9BXJ9 866 aaKnown RBP26.46■■□□□ 1.83
FOXA1-202ENST00000545425 CRNKL1Q9BZJ0 848 aaKnown RBP26.46■■□□□ 1.83
FOXA1-202ENST00000545425 ARPP21Q9UBL0 812 aaPredicted RBP26.46■■□□□ 1.83
FOXA1-202ENST00000545425 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP26.46■■□□□ 1.83
FOXA1-202ENST00000545425 GRIN3BO60391 1043 aa26.46■■□□□ 1.83
FOXA1-202ENST00000545425 PDE4BQ07343 736 aa26.46■■□□□ 1.83
FOXA1-202ENST00000545425 DMTNQ08495 405 aa26.46■■□□□ 1.83
FOXA1-202ENST00000545425 SEMA3FQ13275 785 aa26.46■■□□□ 1.83
FOXA1-202ENST00000545425 CCDC178Q5BJE1 867 aa26.46■■□□□ 1.83
FOXA1-202ENST00000545425 ADGRA1Q86SQ6 560 aa26.46■■□□□ 1.83
FOXA1-202ENST00000545425 CTCFLQ8NI51 663 aaPredicted RBP26.46■■□□□ 1.83
FOXA1-202ENST00000545425 SDR42E1Q8WUS8 393 aa26.46■■□□□ 1.83
FOXA1-202ENST00000545425 MINPP1Q9UNW1 487 aa26.46■■□□□ 1.83
FOXA1-202ENST00000545425 COL1A1P02452 1464 aaPredicted RBP26.46■■□□□ 1.83
FOXA1-202ENST00000545425 KIAA1551Q9HCM1 1747 aa26.45■■□□□ 1.83
FOXA1-202ENST00000545425 UBE2Q2LH0YL09 131 aa26.45■■□□□ 1.82
FOXA1-202ENST00000545425 TGFB2P61812 414 aa26.45■■□□□ 1.82
FOXA1-202ENST00000545425 FAM193AP78312 1265 aa26.45■■□□□ 1.82
FOXA1-202ENST00000545425 SPATA1Q5VX52 437 aa26.45■■□□□ 1.82
FOXA1-202ENST00000545425 BAG1Q99933 345 aaPredicted RBP26.45■■□□□ 1.82
FOXA1-202ENST00000545425 YY1P25490 414 aa26.44■■□□□ 1.82
FOXA1-202ENST00000545425 GABPB1Q06547 395 aaPredicted RBP26.44■■□□□ 1.82
FOXA1-202ENST00000545425 TNFRSF25Q93038 417 aa26.44■■□□□ 1.82
FOXA1-202ENST00000545425 DNAI1Q9UI46 699 aa26.44■■□□□ 1.82
FOXA1-202ENST00000545425 IQSEC3Q9UPP2 1182 aaPredicted RBP26.44■■□□□ 1.82
FOXA1-202ENST00000545425 A0A1B0GTH6 734 aa26.44■■□□□ 1.82
FOXA1-202ENST00000545425 GYG1P46976 350 aa26.44■■□□□ 1.82
FOXA1-202ENST00000545425 CBX1P83916 185 aa26.44■■□□□ 1.82
FOXA1-202ENST00000545425 TMEM139Q8IV31 216 aa26.44■■□□□ 1.82
FOXA1-202ENST00000545425 OXER1Q8TDS5 423 aa26.44■■□□□ 1.82
FOXA1-202ENST00000545425 FAM84BQ96KN1 310 aaPredicted RBP26.44■■□□□ 1.82
FOXA1-202ENST00000545425 PANX2Q96RD6 677 aa26.44■■□□□ 1.82
FOXA1-202ENST00000545425 CALML3P27482 149 aa26.43■■□□□ 1.82
FOXA1-202ENST00000545425 KIF5BP33176 963 aa26.43■■□□□ 1.82
FOXA1-202ENST00000545425 DDR1Q08345 913 aa26.43■■□□□ 1.82
FOXA1-202ENST00000545425 SPTY2D1Q68D10 685 aaPredicted RBP26.43■■□□□ 1.82
FOXA1-202ENST00000545425 CTR9Q6PD62 1173 aa26.43■■□□□ 1.82
FOXA1-202ENST00000545425 REXO1L1PQ8IX06 675 aa26.43■■□□□ 1.82
FOXA1-202ENST00000545425 INTS13Q9NVM9 706 aa26.43■■□□□ 1.82
FOXA1-202ENST00000545425 ATP2C1P98194 919 aaPredicted RBP26.42■■□□□ 1.82
FOXA1-202ENST00000545425 NR1I3Q14994 352 aa26.42■■□□□ 1.82
FOXA1-202ENST00000545425 ERFEQ4G0M1 354 aa26.42■■□□□ 1.82
FOXA1-202ENST00000545425 SH3GLB2Q9NR46 395 aa26.42■■□□□ 1.82
FOXA1-202ENST00000545425 C10orf71Q711Q0 1435 aa26.42■■□□□ 1.82
FOXA1-202ENST00000545425 POLRMTO00411 1230 aaKnown RBP26.42■■□□□ 1.82
FOXA1-202ENST00000545425 FOXN1O15353 648 aa26.42■■□□□ 1.82
FOXA1-202ENST00000545425 PRR29P0C7W0 189 aa26.42■■□□□ 1.82
FOXA1-202ENST00000545425 ZSCAN20P17040 1043 aaPredicted RBP26.42■■□□□ 1.82
FOXA1-202ENST00000545425 GTF2E1P29083 439 aaPredicted RBP26.42■■□□□ 1.82
FOXA1-202ENST00000545425 GRIN1Q05586 938 aa26.42■■□□□ 1.82
FOXA1-202ENST00000545425 NFIXQ14938 502 aa26.42■■□□□ 1.82
FOXA1-202ENST00000545425 TTC38Q5R3I4 469 aa26.42■■□□□ 1.82
FOXA1-202ENST00000545425 TRIM65Q6PJ69 517 aa26.42■■□□□ 1.82
FOXA1-202ENST00000545425 NSUN4Q96CB9 384 aaKnown RBP26.42■■□□□ 1.82
FOXA1-202ENST00000545425 CCDC51Q96ER9 411 aa26.42■■□□□ 1.82
FOXA1-202ENST00000545425 VPS54Q9P1Q0 977 aa26.42■■□□□ 1.82
FOXA1-202ENST00000545425 PPP2R2CQ9Y2T4 447 aa26.42■■□□□ 1.82
FOXA1-202ENST00000545425 CNTNAP5Q8WYK1 1306 aa26.41■■□□□ 1.82
FOXA1-202ENST00000545425 FMR1Q06787 632 aaKnown RBP eCLIP26.41■■□□□ 1.82
FOXA1-202ENST00000545425 FILIP1LQ4L180 1135 aa26.41■■□□□ 1.82
FOXA1-202ENST00000545425 ARL6IP4Q66PJ3 421 aaKnown RBP26.41■■□□□ 1.82
FOXA1-202ENST00000545425 V9GY48 417 aaPredicted RBP26.41■■□□□ 1.82
FOXA1-202ENST00000545425 MYH2Q9UKX2 1941 aa26.41■■□□□ 1.82
FOXA1-202ENST00000545425 MYH13Q9UKX3 1938 aa26.41■■□□□ 1.82
FOXA1-202ENST00000545425 SPECC1Q5M775 1068 aa26.4■■□□□ 1.82
FOXA1-202ENST00000545425 CREBRFQ8IUR6 639 aa26.4■■□□□ 1.82
FOXA1-202ENST00000545425 CCDC82Q8N4S0 544 aa26.4■■□□□ 1.82
FOXA1-202ENST00000545425 IQUBQ8NA54 791 aa26.4■■□□□ 1.82
FOXA1-202ENST00000545425 PAGE5Q96GU1 130 aa26.4■■□□□ 1.82
FOXA1-202ENST00000545425 ARGLU1Q9NWB6 273 aaPredicted RBP26.4■■□□□ 1.82
FOXA1-202ENST00000545425 TMEM232C9JQI7 657 aa26.39■■□□□ 1.82
FOXA1-202ENST00000545425 YBX3P16989 372 aaKnown RBP eCLIP26.39■■□□□ 1.82
FOXA1-202ENST00000545425 SPAG1Q07617 926 aa26.39■■□□□ 1.82
FOXA1-202ENST00000545425 TC2NQ8N9U0 490 aa26.39■■□□□ 1.82
FOXA1-202ENST00000545425 FAM53CQ9NYF3 392 aa26.39■■□□□ 1.82
FOXA1-202ENST00000545425 H2AFXP16104 143 aaPredicted RBP26.39■■□□□ 1.81
FOXA1-202ENST00000545425 DPYDQ12882 1025 aa26.39■■□□□ 1.81
FOXA1-202ENST00000545425 CUL4BQ13620 913 aa26.39■■□□□ 1.81
FOXA1-202ENST00000545425 KRT222Q8N1A0 295 aa26.39■■□□□ 1.81
FOXA1-202ENST00000545425 ANKS1AQ92625 1134 aa26.39■■□□□ 1.81
FOXA1-202ENST00000545425 RMND1Q9NWS8 449 aa26.39■■□□□ 1.81
FOXA1-202ENST00000545425 ITIH6Q6UXX5 1313 aa26.39■■□□□ 1.81
FOXA1-202ENST00000545425 SYNRGQ9UMZ2 1314 aa26.39■■□□□ 1.81
FOXA1-202ENST00000545425 CCDC88AQ3V6T2 1871 aa26.38■■□□□ 1.81
FOXA1-202ENST00000545425 EFCAB8A8MWE9 144 aa26.38■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms