RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 ERVK-24P63145 666 aa14.06□□□□□ -0.16
HDAC4-216ENST00000544989 EVX2Q03828 476 aa14.06□□□□□ -0.16
HDAC4-216ENST00000544989 PRKCZQ05513 592 aa14.06□□□□□ -0.16
HDAC4-216ENST00000544989 ALX1Q15699 326 aa14.06□□□□□ -0.16
HDAC4-216ENST00000544989 MB21D1Q8N884 522 aa14.06□□□□□ -0.16
HDAC4-216ENST00000544989 SOCS4Q8WXH5 440 aa14.06□□□□□ -0.16
HDAC4-216ENST00000544989 SEC62Q99442 399 aaKnown RBP14.06□□□□□ -0.16
HDAC4-216ENST00000544989 RPAP3Q9H6T3 665 aaPredicted RBP14.06□□□□□ -0.16
HDAC4-216ENST00000544989 VCPKMTQ9H867 229 aa14.06□□□□□ -0.16
HDAC4-216ENST00000544989 TRIOBPQ9H2D6 2365 aa14.06□□□□□ -0.16
HDAC4-216ENST00000544989 A0A1W2PRG0 241 aa14.05□□□□□ -0.16
HDAC4-216ENST00000544989 WDR46O15213 610 aaKnown RBP14.05□□□□□ -0.16
HDAC4-216ENST00000544989 RASA1P20936 1047 aa14.05□□□□□ -0.16
HDAC4-216ENST00000544989 FLT3LGP49771 235 aa14.05□□□□□ -0.16
HDAC4-216ENST00000544989 PPARAQ07869 468 aa14.05□□□□□ -0.16
HDAC4-216ENST00000544989 COG2Q14746 738 aa14.05□□□□□ -0.16
HDAC4-216ENST00000544989 TRMT44Q8IYL2 757 aaKnown RBP14.05□□□□□ -0.16
HDAC4-216ENST00000544989 NKX2-3Q8TAU0 364 aa14.05□□□□□ -0.16
HDAC4-216ENST00000544989 TANGO6Q9C0B7 1094 aa14.05□□□□□ -0.16
HDAC4-216ENST00000544989 CWC22Q9HCG8 908 aaKnown RBP14.05□□□□□ -0.16
HDAC4-216ENST00000544989 NYAP2Q9P242 653 aa14.05□□□□□ -0.16
HDAC4-216ENST00000544989 BIN2Q9UBW5 565 aaPredicted RBP14.05□□□□□ -0.16
HDAC4-216ENST00000544989 ZMYM6O95789 1325 aa14.05□□□□□ -0.16
HDAC4-216ENST00000544989 MGAMO43451 1857 aa14.04□□□□□ -0.16
HDAC4-216ENST00000544989 ADCY3O60266 1144 aa14.04□□□□□ -0.16
HDAC4-216ENST00000544989 EEF2P13639 858 aaKnown RBP14.04□□□□□ -0.16
HDAC4-216ENST00000544989 ATP2B2Q01814 1243 aa14.04□□□□□ -0.16
HDAC4-216ENST00000544989 PAGR1Q9BTK6 254 aa14.04□□□□□ -0.16
HDAC4-216ENST00000544989 DIAPH3Q9NSV4 1193 aa14.04□□□□□ -0.16
HDAC4-216ENST00000544989 RBPJLQ9UBG7 517 aa14.04□□□□□ -0.16
HDAC4-216ENST00000544989 ANAPC4Q9UJX5 808 aa14.04□□□□□ -0.16
HDAC4-216ENST00000544989 COL6A3P12111 3177 aa14.04□□□□□ -0.16
HDAC4-216ENST00000544989 SPDYE16A6NNV3 312 aaPredicted RBP14.03□□□□□ -0.16
HDAC4-216ENST00000544989 ECM2O94769 699 aaPredicted RBP14.03□□□□□ -0.16
HDAC4-216ENST00000544989 TSPY3P0CV98 308 aa14.03□□□□□ -0.16
HDAC4-216ENST00000544989 TSPY8P0CW00 308 aa14.03□□□□□ -0.16
HDAC4-216ENST00000544989 PCP11498 1178 aaKnown RBP14.03□□□□□ -0.16
HDAC4-216ENST00000544989 SDSP20132 328 aa14.03□□□□□ -0.16
HDAC4-216ENST00000544989 NT5C2P49902 561 aa14.03□□□□□ -0.16
HDAC4-216ENST00000544989 IRX6P78412 446 aaPredicted RBP14.03□□□□□ -0.16
HDAC4-216ENST00000544989 SIAH1Q8IUQ4 282 aa14.03□□□□□ -0.16
HDAC4-216ENST00000544989 SH3TC2Q8TF17 1288 aa14.03□□□□□ -0.16
HDAC4-216ENST00000544989 NUDT12Q9BQG2 462 aa14.03□□□□□ -0.16
HDAC4-216ENST00000544989 TXNRD2Q9NNW7 524 aa14.03□□□□□ -0.16
HDAC4-216ENST00000544989 GABRQQ9UN88 632 aa14.03□□□□□ -0.16
HDAC4-216ENST00000544989 CCDC171Q6TFL3 1326 aa14.03□□□□□ -0.16
HDAC4-216ENST00000544989 PLIN4Q96Q06 1357 aa14.03□□□□□ -0.16
HDAC4-216ENST00000544989 A0A0D9SFI3 127 aa14.02□□□□□ -0.17
HDAC4-216ENST00000544989 FLOT1O75955 427 aa14.02□□□□□ -0.17
HDAC4-216ENST00000544989 TTLL1O95922 423 aa14.02□□□□□ -0.17
HDAC4-216ENST00000544989 XRCC5P13010 732 aaKnown RBP14.02□□□□□ -0.17
HDAC4-216ENST00000544989 FXR1P51114 621 aaKnown RBP eCLIP14.02□□□□□ -0.17
HDAC4-216ENST00000544989 NMIQ13287 307 aaPredicted RBP14.02□□□□□ -0.17
HDAC4-216ENST00000544989 CCDC129Q6ZRS4 1044 aa14.02□□□□□ -0.17
HDAC4-216ENST00000544989 PLEKHH3Q7Z736 793 aa14.02□□□□□ -0.17
HDAC4-216ENST00000544989 NEDD1Q8NHV4 660 aa14.02□□□□□ -0.17
HDAC4-216ENST00000544989 FAM227BQ96M60 508 aa14.02□□□□□ -0.17
HDAC4-216ENST00000544989 IVNS1ABPQ9Y6Y0 642 aa14.02□□□□□ -0.17
HDAC4-216ENST00000544989 ZSWIM8A7E2V4 1837 aa14.01□□□□□ -0.17
HDAC4-216ENST00000544989 IGKV6D-41A0A0C4DH26 115 aa14.01□□□□□ -0.17
HDAC4-216ENST00000544989 SMIM22K7EJ46 135 aa14.01□□□□□ -0.17
HDAC4-216ENST00000544989 HMGCRP04035 888 aa14.01□□□□□ -0.17
HDAC4-216ENST00000544989 HSPD1P10809 573 aaKnown RBP14.01□□□□□ -0.17
HDAC4-216ENST00000544989 DSG3P32926 999 aa14.01□□□□□ -0.17
HDAC4-216ENST00000544989 GPR142Q7Z601 462 aa14.01□□□□□ -0.17
HDAC4-216ENST00000544989 SHCBP1Q8NEM2 672 aa14.01□□□□□ -0.17
HDAC4-216ENST00000544989 MKL1Q969V6 931 aa14.01□□□□□ -0.17
HDAC4-216ENST00000544989 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.01□□□□□ -0.17
HDAC4-216ENST00000544989 MTMR4Q9NYA4 1195 aa14.01□□□□□ -0.17
HDAC4-216ENST00000544989 GJD2Q9UKL4 321 aa14.01□□□□□ -0.17
HDAC4-216ENST00000544989 SLC15A5A6NIM6 579 aa14□□□□□ -0.17
HDAC4-216ENST00000544989 STRNO43815 780 aa14□□□□□ -0.17
HDAC4-216ENST00000544989 ORC4O43929 436 aa14□□□□□ -0.17
HDAC4-216ENST00000544989 PRDM1O75626 825 aa14□□□□□ -0.17
HDAC4-216ENST00000544989 CNMDO75829 334 aa14□□□□□ -0.17
HDAC4-216ENST00000544989 FGAP02671 866 aa14□□□□□ -0.17
HDAC4-216ENST00000544989 COPB2P35606 906 aa14□□□□□ -0.17
HDAC4-216ENST00000544989 RGS2P41220 211 aa14□□□□□ -0.17
HDAC4-216ENST00000544989 Q3C1V9 767 aa14□□□□□ -0.17
HDAC4-216ENST00000544989 TTC22Q5TAA0 569 aa14□□□□□ -0.17
HDAC4-216ENST00000544989 CLEC10AQ8IUN9 316 aa14□□□□□ -0.17
HDAC4-216ENST00000544989 SPICE1Q8N0Z3 855 aa14□□□□□ -0.17
HDAC4-216ENST00000544989 STK11IPQ8N1F8 1099 aa14□□□□□ -0.17
HDAC4-216ENST00000544989 RNF41Q9H4P4 317 aaPredicted RBP14□□□□□ -0.17
HDAC4-216ENST00000544989 CLIP2Q9UDT6 1046 aa14□□□□□ -0.17
HDAC4-216ENST00000544989 GREB1LQ9C091 1923 aaPredicted RBP14□□□□□ -0.17
HDAC4-216ENST00000544989 POTEFA5A3E0 1075 aa13.99□□□□□ -0.17
HDAC4-216ENST00000544989 TSPY2A6NKD2 308 aa13.99□□□□□ -0.17
HDAC4-216ENST00000544989 FOXP2O15409 715 aa13.99□□□□□ -0.17
HDAC4-216ENST00000544989 RAD21O60216 631 aa13.99□□□□□ -0.17
HDAC4-216ENST00000544989 SLC25A27O95847 323 aa13.99□□□□□ -0.17
HDAC4-216ENST00000544989 INHAP05111 366 aa13.99□□□□□ -0.17
HDAC4-216ENST00000544989 GJB1P08034 283 aa13.99□□□□□ -0.17
HDAC4-216ENST00000544989 FGRP09769 529 aa13.99□□□□□ -0.17
HDAC4-216ENST00000544989 CCL5P13501 91 aa13.99□□□□□ -0.17
HDAC4-216ENST00000544989 TFAP4Q01664 338 aa13.99□□□□□ -0.17
HDAC4-216ENST00000544989 VPS53Q5VIR6 699 aa13.99□□□□□ -0.17
HDAC4-216ENST00000544989 CWC27Q6UX04 472 aaKnown RBP13.99□□□□□ -0.17
HDAC4-216ENST00000544989 GMCL1P1Q8NEA9 526 aa13.99□□□□□ -0.17
HDAC4-216ENST00000544989 RUFY2Q8WXA3 655 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms