RNA–Protein interactions for RNA: ENST00000544750.1

USP28-212, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 542 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-212ENST00000544750 STRNO43815 780 aa15.66■□□□□ 0.1
USP28-212ENST00000544750 COBLO75128 1261 aa15.66■□□□□ 0.1
USP28-212ENST00000544750 ADORA2AP29274 412 aa15.66■□□□□ 0.1
USP28-212ENST00000544750 PLCD1P51178 756 aa15.66■□□□□ 0.1
USP28-212ENST00000544750 GABPAQ06546 454 aa15.66■□□□□ 0.1
USP28-212ENST00000544750 SH3RF1Q7Z6J0 888 aa15.66■□□□□ 0.1
USP28-212ENST00000544750 BADQ92934 168 aa15.66■□□□□ 0.1
USP28-212ENST00000544750 TRIM43Q96BQ3 446 aaPredicted RBP15.66■□□□□ 0.1
USP28-212ENST00000544750 TLR7Q9NYK1 1049 aaKnown RBP15.66■□□□□ 0.1
USP28-212ENST00000544750 A0A1W2PRG0 241 aa15.65■□□□□ 0.1
USP28-212ENST00000544750 USP5P45974 858 aa15.65■□□□□ 0.1
USP28-212ENST00000544750 ATP8B2P98198 1209 aa15.65■□□□□ 0.1
USP28-212ENST00000544750 TRIM60Q495X7 471 aa15.65■□□□□ 0.1
USP28-212ENST00000544750 ANO1Q5XXA6 986 aa15.65■□□□□ 0.1
USP28-212ENST00000544750 DPP9Q86TI2 863 aa15.65■□□□□ 0.1
USP28-212ENST00000544750 TTC6Q86TZ1 520 aa15.65■□□□□ 0.1
USP28-212ENST00000544750 MAGEB6Q8N7X4 407 aa15.65■□□□□ 0.1
USP28-212ENST00000544750 SHCBP1Q8NEM2 672 aa15.65■□□□□ 0.1
USP28-212ENST00000544750 MYLIPQ8WY64 445 aa15.65■□□□□ 0.1
USP28-212ENST00000544750 SPATC1LQ9H0A9 340 aa15.65■□□□□ 0.1
USP28-212ENST00000544750 CABP5Q9NP86 173 aa15.65■□□□□ 0.1
USP28-212ENST00000544750 NOP58Q9Y2X3 529 aaKnown RBP15.65■□□□□ 0.1
USP28-212ENST00000544750 MYO9BQ13459 2157 aa15.65■□□□□ 0.1
USP28-212ENST00000544750 KBTBD13C9JR72 458 aa15.64■□□□□ 0.09
USP28-212ENST00000544750 IPO8O15397 1037 aaKnown RBP15.64■□□□□ 0.09
USP28-212ENST00000544750 IDH1O75874 414 aaKnown RBP15.64■□□□□ 0.09
USP28-212ENST00000544750 ERCC3P19447 782 aa15.64■□□□□ 0.09
USP28-212ENST00000544750 ITGB8P26012 769 aa15.64■□□□□ 0.09
USP28-212ENST00000544750 COG2Q14746 738 aa15.64■□□□□ 0.09
USP28-212ENST00000544750 SEPT2Q15019 361 aa15.64■□□□□ 0.09
USP28-212ENST00000544750 LRRC41Q15345 812 aa15.64■□□□□ 0.09
USP28-212ENST00000544750 EAF2Q96CJ1 260 aaPredicted RBP15.64■□□□□ 0.09
USP28-212ENST00000544750 RIOK1Q9BRS2 568 aaKnown RBP15.64■□□□□ 0.09
USP28-212ENST00000544750 ANTXR1Q9H6X2 564 aa15.64■□□□□ 0.09
USP28-212ENST00000544750 BAZ2AQ9UIF9 1905 aaKnown RBP15.64■□□□□ 0.09
USP28-212ENST00000544750 SURF6O75683 361 aaKnown RBP15.63■□□□□ 0.09
USP28-212ENST00000544750 ADCYAP1R1P41586 468 aa15.63■□□□□ 0.09
USP28-212ENST00000544750 EVX2Q03828 476 aa15.63■□□□□ 0.09
USP28-212ENST00000544750 KIAA1755Q5JYT7 1200 aa15.63■□□□□ 0.09
USP28-212ENST00000544750 TMED8Q6PL24 325 aaPredicted RBP15.63■□□□□ 0.09
USP28-212ENST00000544750 CLUAP1Q96AJ1 413 aa15.63■□□□□ 0.09
USP28-212ENST00000544750 CCDC8Q9H0W5 538 aaPredicted RBP15.63■□□□□ 0.09
USP28-212ENST00000544750 PRDM6Q9NQX0 595 aa15.63■□□□□ 0.09
USP28-212ENST00000544750 PRDM5Q9NQX1 630 aaPredicted RBP15.63■□□□□ 0.09
USP28-212ENST00000544750 HOXC10Q9NYD6 342 aa15.63■□□□□ 0.09
USP28-212ENST00000544750 TMEM265A0A087WTH1 108 aa15.62■□□□□ 0.09
USP28-212ENST00000544750 BCAR3O75815 825 aa15.62■□□□□ 0.09
USP28-212ENST00000544750 FAM47AQ5JRC9 791 aa15.62■□□□□ 0.09
USP28-212ENST00000544750 PRAMEF19Q5SWL8 479 aa15.62■□□□□ 0.09
USP28-212ENST00000544750 ABRAQ8N0Z2 381 aa15.62■□□□□ 0.09
USP28-212ENST00000544750 TMEM57Q8N5G2 664 aa15.62■□□□□ 0.09
USP28-212ENST00000544750 MAML3Q96JK9 1138 aa15.62■□□□□ 0.09
USP28-212ENST00000544750 DSG3P32926 999 aa15.61■□□□□ 0.09
USP28-212ENST00000544750 EPHB4P54760 987 aa15.61■□□□□ 0.09
USP28-212ENST00000544750 TLE2Q04725 743 aa15.61■□□□□ 0.09
USP28-212ENST00000544750 OS9Q13438 667 aaPredicted RBP15.61■□□□□ 0.09
USP28-212ENST00000544750 MB21D1Q8N884 522 aa15.61■□□□□ 0.09
USP28-212ENST00000544750 FERMT2Q96AC1 680 aa15.61■□□□□ 0.09
USP28-212ENST00000544750 MROH8Q9H579 483 aa15.61■□□□□ 0.09
USP28-212ENST00000544750 PHF24Q9UPV7 400 aa15.61■□□□□ 0.09
USP28-212ENST00000544750 MAP3K12Q12852 859 aa15.6■□□□□ 0.09
USP28-212ENST00000544750 SIAH1Q8IUQ4 282 aa15.6■□□□□ 0.09
USP28-212ENST00000544750 FRAT1Q92837 279 aaPredicted RBP15.6■□□□□ 0.09
USP28-212ENST00000544750 NRBP1Q9UHY1 535 aa15.6■□□□□ 0.09
USP28-212ENST00000544750 ROBO3Q96MS0 1386 aa15.6■□□□□ 0.09
USP28-212ENST00000544750 MCM3APO60318 1980 aa15.59■□□□□ 0.09
USP28-212ENST00000544750 KIAA0355O15063 1070 aa15.59■□□□□ 0.09
USP28-212ENST00000544750 FOSL2P15408 326 aa15.59■□□□□ 0.09
USP28-212ENST00000544750 ATG4CQ96DT6 458 aa15.59■□□□□ 0.09
USP28-212ENST00000544750 TANGO6Q9C0B7 1094 aa15.59■□□□□ 0.09
USP28-212ENST00000544750 SLC5A4Q9NY91 659 aa15.59■□□□□ 0.09
USP28-212ENST00000544750 TACC3Q9Y6A5 838 aa15.59■□□□□ 0.09
USP28-212ENST00000544750 MYH7P12883 1935 aa15.58■□□□□ 0.09
USP28-212ENST00000544750 POLR3DP05423 398 aaPredicted RBP15.58■□□□□ 0.08
USP28-212ENST00000544750 CLTBP09497 229 aa15.58■□□□□ 0.08
USP28-212ENST00000544750 C1orf115Q9H7X2 142 aa15.58■□□□□ 0.08
USP28-212ENST00000544750 ADAMTS5Q9UNA0 930 aa15.58■□□□□ 0.08
USP28-212ENST00000544750 NCOR1O75376 2440 aa15.58■□□□□ 0.08
USP28-212ENST00000544750 GREB1LQ9C091 1923 aaPredicted RBP15.58■□□□□ 0.08
USP28-212ENST00000544750 GBF1Q92538 1859 aa15.57■□□□□ 0.08
USP28-212ENST00000544750 TMEM132BQ14DG7 1078 aa15.57■□□□□ 0.08
USP28-212ENST00000544750 TMEM179Q6ZVK1 233 aa15.57■□□□□ 0.08
USP28-212ENST00000544750 NCAPG2Q86XI2 1143 aa15.57■□□□□ 0.08
USP28-212ENST00000544750 USP38Q8NB14 1042 aa15.57■□□□□ 0.08
USP28-212ENST00000544750 SLC44A5Q8NCS7 719 aa15.57■□□□□ 0.08
USP28-212ENST00000544750 SYMPKQ92797 1274 aaKnown RBP15.57■□□□□ 0.08
USP28-212ENST00000544750 RNPC3Q96LT9 517 aaKnown RBP15.57■□□□□ 0.08
USP28-212ENST00000544750 DCP1AQ9NPI6 582 aaPredicted RBP15.57■□□□□ 0.08
USP28-212ENST00000544750 XPNPEP3Q9NQH7 507 aa15.57■□□□□ 0.08
USP28-212ENST00000544750 TMX2Q9Y320 296 aa15.57■□□□□ 0.08
USP28-212ENST00000544750 CHD9Q3L8U1 2897 aa15.56■□□□□ 0.08
USP28-212ENST00000544750 MAGEB6P1A0A0J9YX57 407 aa15.56■□□□□ 0.08
USP28-212ENST00000544750 A0A1W2PQ45 241 aaPredicted RBP15.56■□□□□ 0.08
USP28-212ENST00000544750 A0A1W2PQY0 241 aa15.56■□□□□ 0.08
USP28-212ENST00000544750 MPHOSPH10O00566 681 aaKnown RBP15.56■□□□□ 0.08
USP28-212ENST00000544750 ADAMTS4O75173 837 aa15.56■□□□□ 0.08
USP28-212ENST00000544750 FLOT1O75955 427 aa15.56■□□□□ 0.08
USP28-212ENST00000544750 MYCNP04198 464 aaPredicted RBP15.56■□□□□ 0.08
USP28-212ENST00000544750 ZNF865P0CJ78 1059 aaPredicted RBP15.56■□□□□ 0.08
USP28-212ENST00000544750 FCER1AP12319 257 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms