RNA–Protein interactions for RNA: ENST00000544588.1

CIT-214, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-214ENST00000544588 SALL3Q9BXA9 1300 aa15.7■□□□□ 0.1
CIT-214ENST00000544588 FLOT1O75955 427 aa15.7■□□□□ 0.1
CIT-214ENST00000544588 GJB1P08034 283 aa15.7■□□□□ 0.1
CIT-214ENST00000544588 SLC3A2P08195 630 aaKnown RBP15.7■□□□□ 0.1
CIT-214ENST00000544588 PLS1Q14651 629 aa15.7■□□□□ 0.1
CIT-214ENST00000544588 KIAA1755Q5JYT7 1200 aa15.7■□□□□ 0.1
CIT-214ENST00000544588 GPR142Q7Z601 462 aa15.7■□□□□ 0.1
CIT-214ENST00000544588 SMC5Q8IY18 1101 aa15.7■□□□□ 0.1
CIT-214ENST00000544588 SOCS4Q8WXH5 440 aa15.7■□□□□ 0.1
CIT-214ENST00000544588 LPAR1Q92633 364 aa15.7■□□□□ 0.1
CIT-214ENST00000544588 VCPKMTQ9H867 229 aa15.7■□□□□ 0.1
CIT-214ENST00000544588 MYO5AQ9Y4I1 1855 aaKnown RBP15.69■□□□□ 0.1
CIT-214ENST00000544588 SPDYE16A6NNV3 312 aaPredicted RBP15.69■□□□□ 0.1
CIT-214ENST00000544588 CNMDO75829 334 aa15.69■□□□□ 0.1
CIT-214ENST00000544588 TFRCP02786 760 aaKnown RBP15.69■□□□□ 0.1
CIT-214ENST00000544588 RASA1P20936 1047 aa15.69■□□□□ 0.1
CIT-214ENST00000544588 POTEEQ6S8J3 1075 aa15.69■□□□□ 0.1
CIT-214ENST00000544588 U2AF1L4Q8WU68 220 aaKnown RBP15.69■□□□□ 0.1
CIT-214ENST00000544588 DEFB118Q96PH6 123 aa15.69■□□□□ 0.1
CIT-214ENST00000544588 GOPCQ9HD26 462 aa15.69■□□□□ 0.1
CIT-214ENST00000544588 BTBD7Q9P203 1132 aa15.69■□□□□ 0.1
CIT-214ENST00000544588 IVNS1ABPQ9Y6Y0 642 aa15.69■□□□□ 0.1
CIT-214ENST00000544588 PDE4DIPQ5VU43 2346 aa15.69■□□□□ 0.1
CIT-214ENST00000544588 LAMB1P07942 1786 aa15.69■□□□□ 0.1
CIT-214ENST00000544588 HMGCRP04035 888 aa15.68■□□□□ 0.1
CIT-214ENST00000544588 RGS2P41220 211 aa15.68■□□□□ 0.1
CIT-214ENST00000544588 GJA8P48165 433 aa15.68■□□□□ 0.1
CIT-214ENST00000544588 PDE4BQ07343 736 aa15.68■□□□□ 0.1
CIT-214ENST00000544588 PPARAQ07869 468 aa15.68■□□□□ 0.1
CIT-214ENST00000544588 CLIP2Q9UDT6 1046 aa15.68■□□□□ 0.1
CIT-214ENST00000544588 SIPA1L1O43166 1804 aa15.67■□□□□ 0.1
CIT-214ENST00000544588 WDR46O15213 610 aaKnown RBP15.67■□□□□ 0.1
CIT-214ENST00000544588 TSPY3P0CV98 308 aa15.67■□□□□ 0.1
CIT-214ENST00000544588 TSPY8P0CW00 308 aa15.67■□□□□ 0.1
CIT-214ENST00000544588 DSG3P32926 999 aa15.67■□□□□ 0.1
CIT-214ENST00000544588 NUCB1Q02818 461 aa15.67■□□□□ 0.1
CIT-214ENST00000544588 TRIM32Q13049 653 aa15.67■□□□□ 0.1
CIT-214ENST00000544588 PRPF38BQ5VTL8 546 aaKnown RBP15.67■□□□□ 0.1
CIT-214ENST00000544588 LBX2Q6XYB7 198 aa15.67■□□□□ 0.1
CIT-214ENST00000544588 ATG4CQ96DT6 458 aa15.67■□□□□ 0.1
CIT-214ENST00000544588 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.67■□□□□ 0.1
CIT-214ENST00000544588 HMX1Q9NP08 348 aaPredicted RBP15.67■□□□□ 0.1
CIT-214ENST00000544588 HELLSQ9NRZ9 838 aa15.67■□□□□ 0.1
CIT-214ENST00000544588 SGPL1O95470 568 aa15.66■□□□□ 0.1
CIT-214ENST00000544588 ZKSCAN1P17029 563 aaPredicted RBP15.66■□□□□ 0.1
CIT-214ENST00000544588 MCMDC2Q4G0Z9 681 aa15.66■□□□□ 0.1
CIT-214ENST00000544588 FAM47AQ5JRC9 791 aa15.66■□□□□ 0.1
CIT-214ENST00000544588 FAM83BQ5T0W9 1011 aa15.66■□□□□ 0.1
CIT-214ENST00000544588 NCAPG2Q86XI2 1143 aa15.66■□□□□ 0.1
CIT-214ENST00000544588 TRIB2Q92519 343 aa15.66■□□□□ 0.1
CIT-214ENST00000544588 DPF3Q92784 378 aa15.66■□□□□ 0.1
CIT-214ENST00000544588 SHISA4Q96DD7 197 aa15.66■□□□□ 0.1
CIT-214ENST00000544588 FAM227BQ96M60 508 aa15.66■□□□□ 0.1
CIT-214ENST00000544588 SPATC1LQ9H0A9 340 aa15.66■□□□□ 0.1
CIT-214ENST00000544588 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.66■□□□□ 0.1
CIT-214ENST00000544588 ISY1Q9ULR0 285 aaKnown RBP15.66■□□□□ 0.1
CIT-214ENST00000544588 HTTP42858 3142 aa15.65■□□□□ 0.1
CIT-214ENST00000544588 XRCC5P13010 732 aaKnown RBP15.65■□□□□ 0.1
CIT-214ENST00000544588 PTPREP23469 700 aa15.65■□□□□ 0.1
CIT-214ENST00000544588 TFAP4Q01664 338 aa15.65■□□□□ 0.1
CIT-214ENST00000544588 CTDSPL2Q05D32 466 aa15.65■□□□□ 0.1
CIT-214ENST00000544588 MAP2K5Q13163 448 aa15.65■□□□□ 0.1
CIT-214ENST00000544588 MORN1Q5T089 497 aa15.65■□□□□ 0.1
CIT-214ENST00000544588 VPS53Q5VIR6 699 aa15.65■□□□□ 0.1
CIT-214ENST00000544588 PLEKHM2Q8IWE5 1019 aa15.65■□□□□ 0.1
CIT-214ENST00000544588 TRMT44Q8IYL2 757 aaKnown RBP15.65■□□□□ 0.1
CIT-214ENST00000544588 MB21D1Q8N884 522 aa15.65■□□□□ 0.1
CIT-214ENST00000544588 NUP88Q99567 741 aaPredicted RBP15.65■□□□□ 0.1
CIT-214ENST00000544588 MOV10L1Q9BXT6 1211 aaKnown RBP15.65■□□□□ 0.1
CIT-214ENST00000544588 TOMM22Q9NS69 142 aa15.65■□□□□ 0.1
CIT-214ENST00000544588 FBXO28Q9NVF7 368 aa15.65■□□□□ 0.1
CIT-214ENST00000544588 NYAP2Q9P242 653 aa15.65■□□□□ 0.1
CIT-214ENST00000544588 CTDP1Q9Y5B0 961 aaPredicted RBP15.65■□□□□ 0.1
CIT-214ENST00000544588 RPTORQ8N122 1335 aa15.65■□□□□ 0.1
CIT-214ENST00000544588 ZSWIM8A7E2V4 1837 aa15.64■□□□□ 0.09
CIT-214ENST00000544588 A0A0D9SFI3 127 aa15.64■□□□□ 0.09
CIT-214ENST00000544588 SLC15A5A6NIM6 579 aa15.64■□□□□ 0.09
CIT-214ENST00000544588 F5H6K3 240 aa15.64■□□□□ 0.09
CIT-214ENST00000544588 FARP2O94887 1054 aaPredicted RBP15.64■□□□□ 0.09
CIT-214ENST00000544588 PRKAR2AP13861 404 aaKnown RBP15.64■□□□□ 0.09
CIT-214ENST00000544588 ERCC3P19447 782 aa15.64■□□□□ 0.09
CIT-214ENST00000544588 SLC4A3P48751 1232 aa15.64■□□□□ 0.09
CIT-214ENST00000544588 KLRC3Q07444 240 aa15.64■□□□□ 0.09
CIT-214ENST00000544588 NMIQ13287 307 aaPredicted RBP15.64■□□□□ 0.09
CIT-214ENST00000544588 CCL14Q16627 93 aa15.64■□□□□ 0.09
CIT-214ENST00000544588 DPP9Q86TI2 863 aa15.64■□□□□ 0.09
CIT-214ENST00000544588 CHMP4CQ96CF2 233 aa15.64■□□□□ 0.09
CIT-214ENST00000544588 CEP95Q96GE4 821 aa15.64■□□□□ 0.09
CIT-214ENST00000544588 APBA2Q99767 749 aa15.64■□□□□ 0.09
CIT-214ENST00000544588 INCENPQ9NQS7 918 aa15.64■□□□□ 0.09
CIT-214ENST00000544588 KIAA0100Q14667 2235 aaKnown RBP15.64■□□□□ 0.09
CIT-214ENST00000544588 PHIPQ8WWQ0 1821 aa15.64■□□□□ 0.09
CIT-214ENST00000544588 MYH1P12882 1939 aa15.63■□□□□ 0.09
CIT-214ENST00000544588 TSPY2A6NKD2 308 aa15.63■□□□□ 0.09
CIT-214ENST00000544588 TTLL1O95922 423 aa15.63■□□□□ 0.09
CIT-214ENST00000544588 SDSP20132 328 aa15.63■□□□□ 0.09
CIT-214ENST00000544588 MFSD14CQ5VZR4 134 aa15.63■□□□□ 0.09
CIT-214ENST00000544588 LRRC47Q8N1G4 583 aaKnown RBP15.63■□□□□ 0.09
CIT-214ENST00000544588 USP6NLQ92738 828 aa15.63■□□□□ 0.09
CIT-214ENST00000544588 MTMR4Q9NYA4 1195 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms