RNA–Protein interactions for RNA: ENST00000544551.5

RDX-218, Transcript of radixin, humanhuman

TSL 2 BASIC

Gene RDX, Length 4,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-218ENST00000544551 GOLGA1Q92805 767 aa16.77■□□□□ 0.27
RDX-218ENST00000544551 RBM28Q9NW13 759 aaKnown RBP16.77■□□□□ 0.27
RDX-218ENST00000544551 FRMPD2Q68DX3 1309 aaPredicted RBP16.77■□□□□ 0.27
RDX-218ENST00000544551 CTAGE15A4D2H0 777 aa16.77■□□□□ 0.27
RDX-218ENST00000544551 CTAGE8P0CG41 777 aa16.77■□□□□ 0.27
RDX-218ENST00000544551 TCERG1LQ5VWI1 586 aa16.77■□□□□ 0.27
RDX-218ENST00000544551 RBM43Q6ZSC3 357 aaKnown RBP16.77■□□□□ 0.27
RDX-218ENST00000544551 CTAGE6Q86UF2 777 aa16.77■□□□□ 0.27
RDX-218ENST00000544551 CTAGE4Q8IX94 777 aa16.77■□□□□ 0.27
RDX-218ENST00000544551 LRRN4CLQ8ND94 238 aa16.77■□□□□ 0.27
RDX-218ENST00000544551 RUFY1Q96T51 708 aa16.77■□□□□ 0.27
RDX-218ENST00000544551 MINPP1Q9UNW1 487 aa16.77■□□□□ 0.27
RDX-218ENST00000544551 LDHCP07864 332 aa16.76■□□□□ 0.27
RDX-218ENST00000544551 TECP42680 631 aa16.76■□□□□ 0.27
RDX-218ENST00000544551 BMP2KQ9NSY1 1161 aaPredicted RBP16.76■□□□□ 0.27
RDX-218ENST00000544551 EVX2Q03828 476 aa16.76■□□□□ 0.27
RDX-218ENST00000544551 WDR24Q96S15 920 aa16.76■□□□□ 0.27
RDX-218ENST00000544551 CPDO75976 1380 aa16.76■□□□□ 0.27
RDX-218ENST00000544551 CHMP4BP1P59074 171 aa16.76■□□□□ 0.27
RDX-218ENST00000544551 ADGRA1Q86SQ6 560 aa16.76■□□□□ 0.27
RDX-218ENST00000544551 NBPF11Q86T75 865 aa16.76■□□□□ 0.27
RDX-218ENST00000544551 ANKRD13CQ8N6S4 541 aa16.76■□□□□ 0.27
RDX-218ENST00000544551 ZNF622Q969S3 477 aaKnown RBP eCLIP16.76■□□□□ 0.272e-7■■□□□ 13
RDX-218ENST00000544551 PAGE5Q96GU1 130 aa16.76■□□□□ 0.27
RDX-218ENST00000544551 SRPRBQ9Y5M8 271 aaKnown RBP16.76■□□□□ 0.27
RDX-218ENST00000544551 ERVV-1B6SEH8 477 aa16.75■□□□□ 0.27
RDX-218ENST00000544551 PLCD1P51178 756 aa16.75■□□□□ 0.27
RDX-218ENST00000544551 CCDC40Q4G0X9 1142 aa16.75■□□□□ 0.27
RDX-218ENST00000544551 BLIDQ8IZY5 108 aa16.75■□□□□ 0.27
RDX-218ENST00000544551 TIGD1Q96MW7 591 aa16.75■□□□□ 0.27
RDX-218ENST00000544551 RNF26Q9BY78 433 aaPredicted RBP16.75■□□□□ 0.27
RDX-218ENST00000544551 AGXT2Q9BYV1 514 aa16.75■□□□□ 0.27
RDX-218ENST00000544551 ZNF287Q9HBT7 754 aa16.75■□□□□ 0.27
RDX-218ENST00000544551 TRIM49BA6NDI0 452 aa16.75■□□□□ 0.27
RDX-218ENST00000544551 CLCN6P51797 869 aa16.75■□□□□ 0.27
RDX-218ENST00000544551 MRPS25P82663 173 aaKnown RBP16.75■□□□□ 0.27
RDX-218ENST00000544551 ITPK1Q13572 414 aa16.75■□□□□ 0.27
RDX-218ENST00000544551 CUL4BQ13620 913 aa16.75■□□□□ 0.27
RDX-218ENST00000544551 PTPROQ16827 1216 aa16.75■□□□□ 0.27
RDX-218ENST00000544551 TAF3Q5VWG9 929 aa16.75■□□□□ 0.27
RDX-218ENST00000544551 USP17L2Q6R6M4 530 aa16.75■□□□□ 0.27
RDX-218ENST00000544551 FAM207AQ9NSI2 230 aaPredicted RBP16.75■□□□□ 0.27
RDX-218ENST00000544551 SEPT11Q9NVA2 429 aaKnown RBP16.75■□□□□ 0.27
RDX-218ENST00000544551 PSDA5PKW4 1024 aaPredicted RBP16.75■□□□□ 0.27
RDX-218ENST00000544551 ZMYND10O75800 440 aa16.75■□□□□ 0.27
RDX-218ENST00000544551 SPATA1Q5VX52 437 aa16.75■□□□□ 0.27
RDX-218ENST00000544551 NBPF3Q9H094 633 aa16.75■□□□□ 0.27
RDX-218ENST00000544551 RMND1Q9NWS8 449 aa16.75■□□□□ 0.27
RDX-218ENST00000544551 VPS18Q9P253 973 aa16.75■□□□□ 0.27
RDX-218ENST00000544551 SLIT1O75093 1534 aa16.75■□□□□ 0.27
RDX-218ENST00000544551 ZNF76P36508 570 aa16.74■□□□□ 0.27
RDX-218ENST00000544551 DNAJC21Q5F1R6 531 aaKnown RBP16.74■□□□□ 0.27
RDX-218ENST00000544551 CNGA4Q8IV77 575 aa16.74■□□□□ 0.27
RDX-218ENST00000544551 LRRC47Q8N1G4 583 aaKnown RBP16.74■□□□□ 0.27
RDX-218ENST00000544551 CNBD1Q8NA66 436 aa16.74■□□□□ 0.27
RDX-218ENST00000544551 OSBPL5Q9H0X9 879 aaPredicted RBP16.74■□□□□ 0.27
RDX-218ENST00000544551 KLRF2D3W0D1 207 aa16.74■□□□□ 0.27
RDX-218ENST00000544551 SLFN14P0C7P3 912 aa16.74■□□□□ 0.27
RDX-218ENST00000544551 TCP10Q12799 353 aa16.74■□□□□ 0.27
RDX-218ENST00000544551 MORC3Q14149 939 aa16.74■□□□□ 0.27
RDX-218ENST00000544551 SGMS1Q86VZ5 419 aa16.74■□□□□ 0.27
RDX-218ENST00000544551 RFX7Q2KHR2 1363 aa16.74■□□□□ 0.27
RDX-218ENST00000544551 FOXP2O15409 715 aa16.74■□□□□ 0.27
RDX-218ENST00000544551 TOB1P50616 345 aaPredicted RBP16.74■□□□□ 0.27
RDX-218ENST00000544551 LEKR1Q6ZMV7 388 aa16.74■□□□□ 0.27
RDX-218ENST00000544551 STAG1Q8WVM7 1258 aa16.74■□□□□ 0.27
RDX-218ENST00000544551 FERMT2Q96AC1 680 aa16.74■□□□□ 0.27
RDX-218ENST00000544551 FAM84BQ96KN1 310 aaPredicted RBP16.74■□□□□ 0.27
RDX-218ENST00000544551 LMTK3Q96Q04 1460 aa16.74■□□□□ 0.27
RDX-218ENST00000544551 KCNJ18B7U540 433 aa16.73■□□□□ 0.27
RDX-218ENST00000544551 KCNJ12Q14500 433 aa16.73■□□□□ 0.27
RDX-218ENST00000544551 STAG2Q8N3U4 1231 aa16.73■□□□□ 0.27
RDX-218ENST00000544551 AKAP12Q02952 1782 aa16.73■□□□□ 0.27
RDX-218ENST00000544551 ZNF804BA4D1E1 1349 aa16.73■□□□□ 0.27
RDX-218ENST00000544551 SPAG1Q07617 926 aa16.73■□□□□ 0.27
RDX-218ENST00000544551 UBE4AQ14139 1066 aa16.73■□□□□ 0.27
RDX-218ENST00000544551 PTPAQ15257 358 aa16.73■□□□□ 0.27
RDX-218ENST00000544551 TBC1D9BQ66K14 1250 aa16.73■□□□□ 0.27
RDX-218ENST00000544551 CCDC42Q96M95 316 aa16.73■□□□□ 0.27
RDX-218ENST00000544551 CRACR2AQ9BSW2 395 aa16.73■□□□□ 0.27
RDX-218ENST00000544551 SLC39A2Q9NP94 309 aa16.73■□□□□ 0.27
RDX-218ENST00000544551 UBAP1LF5GYI3 381 aa16.73■□□□□ 0.27
RDX-218ENST00000544551 PARP1P09874 1014 aaKnown RBP16.73■□□□□ 0.27
RDX-218ENST00000544551 NEK11Q8NG66 645 aa16.73■□□□□ 0.27
RDX-218ENST00000544551 NOC4LQ9BVI4 516 aaKnown RBP16.73■□□□□ 0.27
RDX-218ENST00000544551 GTPBP4Q9BZE4 634 aaKnown RBP16.73■□□□□ 0.27
RDX-218ENST00000544551 FBXO2Q9UK22 296 aaPredicted RBP16.73■□□□□ 0.27
RDX-218ENST00000544551 SMCO2A6NFE2 343 aa16.72■□□□□ 0.27
RDX-218ENST00000544551 TMEM266Q2M3C6 531 aa16.72■□□□□ 0.27
RDX-218ENST00000544551 EARS2Q5JPH6 523 aaKnown RBP16.72■□□□□ 0.27
RDX-218ENST00000544551 SLC35F6Q8N357 371 aa16.72■□□□□ 0.27
RDX-218ENST00000544551 EIF3JO75822 258 aaKnown RBP16.72■□□□□ 0.27
RDX-218ENST00000544551 SCNN1DP51172 638 aa16.72■□□□□ 0.27
RDX-218ENST00000544551 TRAPPC3LQ5T215 181 aa16.72■□□□□ 0.27
RDX-218ENST00000544551 C3orf67Q6ZVT6 689 aa16.72■□□□□ 0.27
RDX-218ENST00000544551 RRP36Q96EU6 259 aaKnown RBP16.72■□□□□ 0.27
RDX-218ENST00000544551 ACBD3Q9H3P7 528 aa16.72■□□□□ 0.27
RDX-218ENST00000544551 C6orf50Q9HD87 102 aa16.72■□□□□ 0.27
RDX-218ENST00000544551 FAM217BQ9NTX9 383 aaPredicted RBP16.72■□□□□ 0.27
RDX-218ENST00000544551 CDHR2Q9BYE9 1310 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms