RNA–Protein interactions for RNA: ENST00000544455.5

BRCA2-206, Transcript of BRCA2, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA2, Length 10,984 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-206ENST00000544455 TEX11Q8IYF3 940 aa4.3□□□□□ -1.72
BRCA2-206ENST00000544455 CD209Q9NNX6 404 aa4.3□□□□□ -1.72
BRCA2-206ENST00000544455 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.3□□□□□ -1.72
BRCA2-206ENST00000544455 MAD2L2Q9UI95 211 aa4.3□□□□□ -1.72
BRCA2-206ENST00000544455 CNTNAP4Q9C0A0 1308 aa4.3□□□□□ -1.72
BRCA2-206ENST00000544455 CUTAO60888 179 aa4.3□□□□□ -1.72
BRCA2-206ENST00000544455 LETM2Q2VYF4 491 aa4.3□□□□□ -1.72
BRCA2-206ENST00000544455 GLIPR1L2Q4G1C9 344 aa4.3□□□□□ -1.72
BRCA2-206ENST00000544455 RILPL1Q5EBL4 403 aa4.3□□□□□ -1.72
BRCA2-206ENST00000544455 RRAGBQ5VZM2 374 aa4.3□□□□□ -1.72
BRCA2-206ENST00000544455 TMTC3Q6ZXV5 915 aa4.3□□□□□ -1.72
BRCA2-206ENST00000544455 RNF26Q9BY78 433 aaPredicted RBP4.3□□□□□ -1.72
BRCA2-206ENST00000544455 FOXP1Q9H334 677 aaPredicted RBP4.3□□□□□ -1.72
BRCA2-206ENST00000544455 SRPRBQ9Y5M8 271 aaKnown RBP4.3□□□□□ -1.72
BRCA2-206ENST00000544455 LRP5O75197 1615 aa4.3□□□□□ -1.72
BRCA2-206ENST00000544455 XBP1P17861 261 aa4.29□□□□□ -1.72
BRCA2-206ENST00000544455 ANKRD2Q9GZV1 360 aa4.29□□□□□ -1.72
BRCA2-206ENST00000544455 ARPP21Q9UBL0 812 aaPredicted RBP4.29□□□□□ -1.72
BRCA2-206ENST00000544455 NFE2L3Q9Y4A8 694 aa4.29□□□□□ -1.72
BRCA2-206ENST00000544455 RBM5P52756 815 aaKnown RBP eCLIP4.29□□□□□ -1.72
BRCA2-206ENST00000544455 JAKMIP3Q5VZ66 844 aa4.29□□□□□ -1.72
BRCA2-206ENST00000544455 KLHL34Q8N239 644 aa4.29□□□□□ -1.72
BRCA2-206ENST00000544455 HPS3Q969F9 1004 aa4.29□□□□□ -1.72
BRCA2-206ENST00000544455 PPP1R13BQ96KQ4 1090 aa4.29□□□□□ -1.72
BRCA2-206ENST00000544455 TMEM60Q9H2L4 133 aa4.29□□□□□ -1.72
BRCA2-206ENST00000544455 GGA1Q9UJY5 639 aa4.29□□□□□ -1.72
BRCA2-206ENST00000544455 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.29□□□□□ -1.72
BRCA2-206ENST00000544455 RTL9Q8NET4 1388 aa4.29□□□□□ -1.72
BRCA2-206ENST00000544455 CYTH3O43739 400 aa4.29□□□□□ -1.72
BRCA2-206ENST00000544455 PRKCSHP14314 528 aaPredicted RBP4.29□□□□□ -1.72
BRCA2-206ENST00000544455 CDK8P49336 464 aa4.29□□□□□ -1.72
BRCA2-206ENST00000544455 UBE2SQ16763 222 aa4.29□□□□□ -1.72
BRCA2-206ENST00000544455 COA7Q96BR5 231 aa4.29□□□□□ -1.72
BRCA2-206ENST00000544455 POLD4Q9HCU8 107 aa4.29□□□□□ -1.72
BRCA2-206ENST00000544455 DDX4Q9NQI0 724 aaKnown RBP4.29□□□□□ -1.72
BRCA2-206ENST00000544455 G3V3G9 751 aa4.29□□□□□ -1.72
BRCA2-206ENST00000544455 RASA1P20936 1047 aa4.29□□□□□ -1.72
BRCA2-206ENST00000544455 DCAF8Q5TAQ9 597 aa4.29□□□□□ -1.72
BRCA2-206ENST00000544455 RTFDC1Q9BY42 306 aaPredicted RBP4.29□□□□□ -1.72
BRCA2-206ENST00000544455 IRX2Q9BZI1 471 aaPredicted RBP4.29□□□□□ -1.72
BRCA2-206ENST00000544455 BRMS1Q9HCU9 246 aa4.29□□□□□ -1.72
BRCA2-206ENST00000544455 GPCPD1Q9NPB8 672 aa4.29□□□□□ -1.72
BRCA2-206ENST00000544455 ANAPC4Q9UJX5 808 aa4.29□□□□□ -1.72
BRCA2-206ENST00000544455 ZNF215Q9UL58 517 aaPredicted RBP4.29□□□□□ -1.72
BRCA2-206ENST00000544455 GDAQ9Y2T3 454 aa4.29□□□□□ -1.72
BRCA2-206ENST00000544455 TPM4P67936 248 aa4.29□□□□□ -1.72
BRCA2-206ENST00000544455 ZFPM1Q8IX07 1006 aa4.29□□□□□ -1.72
BRCA2-206ENST00000544455 PROM2Q8N271 834 aa4.29□□□□□ -1.72
BRCA2-206ENST00000544455 TMEM47Q9BQJ4 181 aa4.29□□□□□ -1.72
BRCA2-206ENST00000544455 STK36Q9NRP7 1315 aa4.29□□□□□ -1.72
BRCA2-206ENST00000544455 SOWAHDA6NJG2 315 aa4.29□□□□□ -1.72
BRCA2-206ENST00000544455 USP17L5A8MUK1 530 aa4.29□□□□□ -1.72
BRCA2-206ENST00000544455 ABL1P00519 1130 aa4.29□□□□□ -1.72
BRCA2-206ENST00000544455 TOP1P11387 765 aaKnown RBP4.29□□□□□ -1.72
BRCA2-206ENST00000544455 RBL2Q08999 1139 aa4.29□□□□□ -1.72
BRCA2-206ENST00000544455 PTPN14Q15678 1187 aa4.29□□□□□ -1.72
BRCA2-206ENST00000544455 SLC10A5Q5PT55 438 aa4.29□□□□□ -1.72
BRCA2-206ENST00000544455 TBC1D16Q8TBP0 767 aa4.29□□□□□ -1.72
BRCA2-206ENST00000544455 LRRC15Q8TF66 581 aa4.29□□□□□ -1.72
BRCA2-206ENST00000544455 ZNF622Q969S3 477 aaKnown RBP eCLIP4.29□□□□□ -1.72
BRCA2-206ENST00000544455 PCDHA6Q9UN73 950 aa4.29□□□□□ -1.72
BRCA2-206ENST00000544455 PCDHA8Q9Y5H6 950 aa4.29□□□□□ -1.72
BRCA2-206ENST00000544455 AHDC1Q5TGY3 1603 aaPredicted RBP4.29□□□□□ -1.72
BRCA2-206ENST00000544455 SMTNL1A8MU46 457 aa4.29□□□□□ -1.72
BRCA2-206ENST00000544455 TFRCP02786 760 aaKnown RBP4.29□□□□□ -1.72
BRCA2-206ENST00000544455 TPM3P06753 285 aa4.29□□□□□ -1.72
BRCA2-206ENST00000544455 KCTD1Q719H9 257 aa4.29□□□□□ -1.72
BRCA2-206ENST00000544455 ZFP91Q96JP5 570 aaPredicted RBP4.29□□□□□ -1.72
BRCA2-206ENST00000544455 SFPQP23246 707 aaKnown RBP eCLIP4.29□□□□□ -1.72
BRCA2-206ENST00000544455 SLC30A10Q6XR72 485 aa4.29□□□□□ -1.72
BRCA2-206ENST00000544455 KIAA0825Q8IV33 1275 aa4.29□□□□□ -1.72
BRCA2-206ENST00000544455 TNFRSF25Q93038 417 aa4.29□□□□□ -1.72
BRCA2-206ENST00000544455 CEP95Q96GE4 821 aa4.29□□□□□ -1.72
BRCA2-206ENST00000544455 EYA3Q99504 573 aa4.29□□□□□ -1.72
BRCA2-206ENST00000544455 XDHP47989 1333 aa4.29□□□□□ -1.72
BRCA2-206ENST00000544455 DYNC1I1O14576 645 aa4.29□□□□□ -1.72
BRCA2-206ENST00000544455 CCNT1O60563 726 aaKnown RBP4.29□□□□□ -1.72
BRCA2-206ENST00000544455 TTBK2Q6IQ55 1244 aa4.29□□□□□ -1.72
BRCA2-206ENST00000544455 BLIDQ8IZY5 108 aa4.29□□□□□ -1.72
BRCA2-206ENST00000544455 CCAR2Q8N163 923 aaKnown RBP4.29□□□□□ -1.72
BRCA2-206ENST00000544455 CCDC112Q8NEF3 446 aa4.29□□□□□ -1.72
BRCA2-206ENST00000544455 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.29□□□□□ -1.72
BRCA2-206ENST00000544455 SRCAPQ6ZRS2 3230 aa4.29□□□□□ -1.72
BRCA2-206ENST00000544455 LTBP4Q8N2S1 1624 aa4.29□□□□□ -1.72
BRCA2-206ENST00000544455 FLT1P17948 1338 aa4.28□□□□□ -1.72
BRCA2-206ENST00000544455 NOL10Q9BSC4 688 aaKnown RBP4.28□□□□□ -1.72
BRCA2-206ENST00000544455 TAB2Q9NYJ8 693 aa4.28□□□□□ -1.72
BRCA2-206ENST00000544455 TFR2Q9UP52 801 aa4.28□□□□□ -1.72
BRCA2-206ENST00000544455 CDC25BP30305 580 aa4.28□□□□□ -1.72
BRCA2-206ENST00000544455 ST5P78524 1137 aa4.28□□□□□ -1.72
BRCA2-206ENST00000544455 NCBP1Q09161 790 aaKnown RBP4.28□□□□□ -1.72
BRCA2-206ENST00000544455 RAD51AP2Q09MP3 1159 aa4.28□□□□□ -1.72
BRCA2-206ENST00000544455 DYMQ7RTS9 669 aa4.28□□□□□ -1.72
BRCA2-206ENST00000544455 ZSWIM4Q9H7M6 989 aa4.28□□□□□ -1.72
BRCA2-206ENST00000544455 ATP8A2Q9NTI2 1148 aa4.28□□□□□ -1.72
BRCA2-206ENST00000544455 DNAI1Q9UI46 699 aa4.28□□□□□ -1.72
BRCA2-206ENST00000544455 TXKP42681 527 aa4.28□□□□□ -1.72
BRCA2-206ENST00000544455 PMS1P54277 932 aaKnown RBP4.28□□□□□ -1.72
BRCA2-206ENST00000544455 DPP8Q6V1X1 898 aaPredicted RBP4.28□□□□□ -1.72
BRCA2-206ENST00000544455 FNBP4Q8N3X1 1017 aaPredicted RBP4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms