RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 ADCY3O60266 1144 aa27.71■■■□□ 2.03
CHFR-222ENST00000544093 EEF2P13639 858 aaKnown RBP27.71■■■□□ 2.03
CHFR-222ENST00000544093 COG2Q14746 738 aa27.71■■■□□ 2.03
CHFR-222ENST00000544093 SOCS4Q8WXH5 440 aa27.71■■■□□ 2.03
CHFR-222ENST00000544093 RILPL2Q969X0 211 aa27.71■■■□□ 2.03
CHFR-222ENST00000544093 PAGR1Q9BTK6 254 aa27.71■■■□□ 2.03
CHFR-222ENST00000544093 TANGO6Q9C0B7 1094 aa27.71■■■□□ 2.03
CHFR-222ENST00000544093 GOPCQ9HD26 462 aa27.71■■■□□ 2.03
CHFR-222ENST00000544093 BIN2Q9UBW5 565 aaPredicted RBP27.71■■■□□ 2.03
CHFR-222ENST00000544093 TNRC18O15417 2968 aaPredicted RBP27.7■■■□□ 2.03
CHFR-222ENST00000544093 WDR46O15213 610 aaKnown RBP27.7■■■□□ 2.02
CHFR-222ENST00000544093 POTEFA5A3E0 1075 aa27.69■■■□□ 2.02
CHFR-222ENST00000544093 MFAP1P55081 439 aaKnown RBP27.69■■■□□ 2.02
CHFR-222ENST00000544093 ATP2B2Q01814 1243 aa27.69■■■□□ 2.02
CHFR-222ENST00000544093 PPARAQ07869 468 aa27.69■■■□□ 2.02
CHFR-222ENST00000544093 CLEC10AQ8IUN9 316 aa27.69■■■□□ 2.02
CHFR-222ENST00000544093 SPDYE16A6NNV3 312 aaPredicted RBP27.68■■■□□ 2.02
CHFR-222ENST00000544093 HIP1O00291 1037 aa27.68■■■□□ 2.02
CHFR-222ENST00000544093 IRX6P78412 446 aaPredicted RBP27.68■■■□□ 2.02
CHFR-222ENST00000544093 CCDC129Q6ZRS4 1044 aa27.68■■■□□ 2.02
CHFR-222ENST00000544093 MB21D1Q8N884 522 aa27.68■■■□□ 2.02
CHFR-222ENST00000544093 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.68■■■□□ 2.02
CHFR-222ENST00000544093 NYAP2Q9P242 653 aa27.68■■■□□ 2.02
CHFR-222ENST00000544093 SYNPO2Q9UMS6 1093 aa27.68■■■□□ 2.02
CHFR-222ENST00000544093 BRCA2P51587 3418 aa27.68■■■□□ 2.02
CHFR-222ENST00000544093 ALX1Q15699 326 aa27.67■■■□□ 2.02
CHFR-222ENST00000544093 STK11IPQ8N1F8 1099 aa27.67■■■□□ 2.02
CHFR-222ENST00000544093 NKX2-3Q8TAU0 364 aa27.67■■■□□ 2.02
CHFR-222ENST00000544093 FAM227BQ96M60 508 aa27.67■■■□□ 2.02
CHFR-222ENST00000544093 NUDT12Q9BQG2 462 aa27.67■■■□□ 2.02
CHFR-222ENST00000544093 CWC22Q9HCG8 908 aaKnown RBP27.67■■■□□ 2.02
CHFR-222ENST00000544093 GJD2Q9UKL4 321 aa27.67■■■□□ 2.02
CHFR-222ENST00000544093 PLIN4Q96Q06 1357 aa27.66■■■□□ 2.02
CHFR-222ENST00000544093 A0A0D9SFI3 127 aa27.66■■■□□ 2.02
CHFR-222ENST00000544093 Q3C1V9 767 aa27.66■■■□□ 2.02
CHFR-222ENST00000544093 PPP4R3BQ5MIZ7 849 aa27.66■■■□□ 2.02
CHFR-222ENST00000544093 SPICE1Q8N0Z3 855 aa27.66■■■□□ 2.02
CHFR-222ENST00000544093 ZMYM6O95789 1325 aa27.66■■■□□ 2.02
CHFR-222ENST00000544093 FLOT1O75955 427 aa27.65■■■□□ 2.02
CHFR-222ENST00000544093 XRCC5P13010 732 aaKnown RBP27.65■■■□□ 2.02
CHFR-222ENST00000544093 CAPN2P17655 700 aa27.65■■■□□ 2.02
CHFR-222ENST00000544093 SDSP20132 328 aa27.65■■■□□ 2.02
CHFR-222ENST00000544093 NMIQ13287 307 aaPredicted RBP27.65■■■□□ 2.02
CHFR-222ENST00000544093 POTEEQ6S8J3 1075 aa27.65■■■□□ 2.02
CHFR-222ENST00000544093 TRMT44Q8IYL2 757 aaKnown RBP27.65■■■□□ 2.02
CHFR-222ENST00000544093 ANAPC4Q9UJX5 808 aa27.65■■■□□ 2.02
CHFR-222ENST00000544093 PDE4DIPQ5VU43 2346 aa27.65■■■□□ 2.02
CHFR-222ENST00000544093 RLFQ13129 1914 aa27.65■■■□□ 2.02
CHFR-222ENST00000544093 A0A0G2JMZ2 1700 aa27.64■■■□□ 2.02
CHFR-222ENST00000544093 FOXP2O15409 715 aa27.64■■■□□ 2.02
CHFR-222ENST00000544093 PRDM1O75626 825 aa27.64■■■□□ 2.02
CHFR-222ENST00000544093 CNMDO75829 334 aa27.64■■■□□ 2.02
CHFR-222ENST00000544093 MYCP01106 439 aaPredicted RBP27.64■■■□□ 2.02
CHFR-222ENST00000544093 TSPY3P0CV98 308 aa27.64■■■□□ 2.02
CHFR-222ENST00000544093 TSPY8P0CW00 308 aa27.64■■■□□ 2.02
CHFR-222ENST00000544093 KIAA1755Q5JYT7 1200 aa27.64■■■□□ 2.02
CHFR-222ENST00000544093 GPR142Q7Z601 462 aa27.64■■■□□ 2.02
CHFR-222ENST00000544093 PLEKHH3Q7Z736 793 aa27.64■■■□□ 2.02
CHFR-222ENST00000544093 NEDD1Q8NHV4 660 aa27.64■■■□□ 2.02
CHFR-222ENST00000544093 PORCNQ9H237 461 aa27.64■■■□□ 2.02
CHFR-222ENST00000544093 MYH4Q9Y623 1939 aa27.64■■■□□ 2.02
CHFR-222ENST00000544093 PLXNB2O15031 1838 aa27.64■■■□□ 2.01
CHFR-222ENST00000544093 PARP14Q460N5 1801 aa27.64■■■□□ 2.01
CHFR-222ENST00000544093 CCDC171Q6TFL3 1326 aa27.64■■■□□ 2.01
CHFR-222ENST00000544093 IGKV6D-41A0A0C4DH26 115 aa27.63■■■□□ 2.01
CHFR-222ENST00000544093 HMGCRP04035 888 aa27.63■■■□□ 2.01
CHFR-222ENST00000544093 INHAP05111 366 aa27.63■■■□□ 2.01
CHFR-222ENST00000544093 CCL5P13501 91 aa27.63■■■□□ 2.01
CHFR-222ENST00000544093 ELNP15502 786 aa27.63■■■□□ 2.01
CHFR-222ENST00000544093 EN2P19622 333 aaPredicted RBP27.63■■■□□ 2.01
CHFR-222ENST00000544093 DSG3P32926 999 aa27.63■■■□□ 2.01
CHFR-222ENST00000544093 MTFR1Q15390 333 aa27.63■■■□□ 2.01
CHFR-222ENST00000544093 RNF208Q9H0X6 261 aa27.63■■■□□ 2.01
CHFR-222ENST00000544093 DIAPH3Q9NSV4 1193 aa27.63■■■□□ 2.01
CHFR-222ENST00000544093 PEX10O60683 326 aa27.62■■■□□ 2.01
CHFR-222ENST00000544093 TTLL1O95922 423 aa27.62■■■□□ 2.01
CHFR-222ENST00000544093 GJB1P08034 283 aa27.62■■■□□ 2.01
CHFR-222ENST00000544093 VPS53Q5VIR6 699 aa27.62■■■□□ 2.01
CHFR-222ENST00000544093 MKL1Q969V6 931 aa27.62■■■□□ 2.01
CHFR-222ENST00000544093 MTMR4Q9NYA4 1195 aa27.62■■■□□ 2.01
CHFR-222ENST00000544093 BTBD7Q9P203 1132 aa27.62■■■□□ 2.01
CHFR-222ENST00000544093 IVNS1ABPQ9Y6Y0 642 aa27.62■■■□□ 2.01
CHFR-222ENST00000544093 HSPD1P10809 573 aaKnown RBP27.61■■■□□ 2.01
CHFR-222ENST00000544093 RGS2P41220 211 aa27.61■■■□□ 2.01
CHFR-222ENST00000544093 CEP95Q96GE4 821 aa27.61■■■□□ 2.01
CHFR-222ENST00000544093 RAD21O60216 631 aa27.6■■■□□ 2.01
CHFR-222ENST00000544093 FGAP02671 866 aa27.6■■■□□ 2.01
CHFR-222ENST00000544093 TFAP4Q01664 338 aa27.6■■■□□ 2.01
CHFR-222ENST00000544093 MORN1Q5T089 497 aa27.6■■■□□ 2.01
CHFR-222ENST00000544093 SHCBP1Q8NEM2 672 aa27.6■■■□□ 2.01
CHFR-222ENST00000544093 SPATC1LQ9H0A9 340 aa27.6■■■□□ 2.01
CHFR-222ENST00000544093 CLIP2Q9UDT6 1046 aa27.6■■■□□ 2.01
CHFR-222ENST00000544093 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.6■■■□□ 2.01
CHFR-222ENST00000544093 F5H6K3 240 aa27.59■■■□□ 2.01
CHFR-222ENST00000544093 GJA8P48165 433 aa27.59■■■□□ 2.01
CHFR-222ENST00000544093 KLRC3Q07444 240 aa27.59■■■□□ 2.01
CHFR-222ENST00000544093 WDR78Q5VTH9 848 aa27.59■■■□□ 2.01
CHFR-222ENST00000544093 ZNF589Q86UQ0 364 aaPredicted RBP27.59■■■□□ 2.01
CHFR-222ENST00000544093 USP6NLQ92738 828 aa27.59■■■□□ 2.01
CHFR-222ENST00000544093 SLC15A5A6NIM6 579 aa27.58■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms