RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 DHX40Q8IX18 779 aaKnown RBP19.56■□□□□ 0.72
PTPRO-209ENST00000543886 TTF2Q9UNY4 1162 aaKnown RBP19.56■□□□□ 0.72
PTPRO-209ENST00000543886 SRPRBQ9Y5M8 271 aaKnown RBP19.56■□□□□ 0.72
PTPRO-209ENST00000543886 DPCR1Q3MIW9 517 aa19.56■□□□□ 0.72
PTPRO-209ENST00000543886 DRC7Q8IY82 874 aa19.56■□□□□ 0.72
PTPRO-209ENST00000543886 CERS5Q8N5B7 392 aa19.56■□□□□ 0.72
PTPRO-209ENST00000543886 CNNM3Q8NE01 707 aa19.56■□□□□ 0.72
PTPRO-209ENST00000543886 TMEM47Q9BQJ4 181 aa19.56■□□□□ 0.72
PTPRO-209ENST00000543886 HOOK1Q9UJC3 728 aaKnown RBP19.56■□□□□ 0.72
PTPRO-209ENST00000543886 BIN1O00499 593 aa19.55■□□□□ 0.72
PTPRO-209ENST00000543886 CALML3P27482 149 aa19.55■□□□□ 0.72
PTPRO-209ENST00000543886 EARS2Q5JPH6 523 aaKnown RBP19.55■□□□□ 0.72
PTPRO-209ENST00000543886 SPECC1Q5M775 1068 aa19.55■□□□□ 0.72
PTPRO-209ENST00000543886 SARM1Q6SZW1 724 aa19.55■□□□□ 0.72
PTPRO-209ENST00000543886 KRBA2Q6ZNG9 492 aa19.55■□□□□ 0.72
PTPRO-209ENST00000543886 AOPEPQ8N6M6 819 aa19.55■□□□□ 0.72
PTPRO-209ENST00000543886 NEDD1Q8NHV4 660 aa19.55■□□□□ 0.72
PTPRO-209ENST00000543886 TNFRSF25Q93038 417 aa19.55■□□□□ 0.72
PTPRO-209ENST00000543886 ZNF830Q96NB3 372 aaPredicted RBP19.55■□□□□ 0.72
PTPRO-209ENST00000543886 MAD2L2Q9UI95 211 aa19.55■□□□□ 0.72
PTPRO-209ENST00000543886 MORC2Q9Y6X9 1032 aaPredicted RBP19.55■□□□□ 0.72
PTPRO-209ENST00000543886 H0YIN7 160 aa19.55■□□□□ 0.72
PTPRO-209ENST00000543886 PICALMQ13492 652 aa19.55■□□□□ 0.72
PTPRO-209ENST00000543886 NPY5RQ15761 445 aa19.55■□□□□ 0.72
PTPRO-209ENST00000543886 STAG2Q8N3U4 1231 aa19.55■□□□□ 0.72
PTPRO-209ENST00000543886 BPIFA3Q9BQP9 254 aa19.55■□□□□ 0.72
PTPRO-209ENST00000543886 TTC12Q9H892 705 aaPredicted RBP19.55■□□□□ 0.72
PTPRO-209ENST00000543886 MTMR7Q9Y216 660 aa19.55■□□□□ 0.72
PTPRO-209ENST00000543886 GRIN1Q05586 938 aa19.54■□□□□ 0.72
PTPRO-209ENST00000543886 LONRF3Q496Y0 759 aa19.54■□□□□ 0.72
PTPRO-209ENST00000543886 STYK1Q6J9G0 422 aa19.54■□□□□ 0.72
PTPRO-209ENST00000543886 LZTS2Q9BRK4 669 aa19.54■□□□□ 0.72
PTPRO-209ENST00000543886 SH3GLB2Q9NR46 395 aa19.54■□□□□ 0.72
PTPRO-209ENST00000543886 TTC38Q5R3I4 469 aa19.53■□□□□ 0.72
PTPRO-209ENST00000543886 MXD3Q9BW11 206 aa19.53■□□□□ 0.72
PTPRO-209ENST00000543886 TUBE1Q9UJT0 475 aa19.53■□□□□ 0.72
PTPRO-209ENST00000543886 PNOCQ13519 176 aa19.53■□□□□ 0.72
PTPRO-209ENST00000543886 BAZ2BQ9UIF8 2168 aaKnown RBP19.52■□□□□ 0.72
PTPRO-209ENST00000543886 CDC25BP30305 580 aa19.52■□□□□ 0.72
PTPRO-209ENST00000543886 SCNN1DP51172 638 aa19.52■□□□□ 0.72
PTPRO-209ENST00000543886 GLIPR1L2Q4G1C9 344 aa19.52■□□□□ 0.72
PTPRO-209ENST00000543886 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.52■□□□□ 0.72
PTPRO-209ENST00000543886 ELOA2Q8IYF1 753 aaPredicted RBP19.52■□□□□ 0.72
PTPRO-209ENST00000543886 TEKT1Q969V4 418 aa19.52■□□□□ 0.72
PTPRO-209ENST00000543886 FERMT2Q96AC1 680 aa19.52■□□□□ 0.72
PTPRO-209ENST00000543886 CSRNP2Q9H175 543 aa19.52■□□□□ 0.72
PTPRO-209ENST00000543886 USP40Q9NVE5 1235 aa19.52■□□□□ 0.72
PTPRO-209ENST00000543886 PALM3A6NDB9 673 aaPredicted RBP19.52■□□□□ 0.71
PTPRO-209ENST00000543886 TOP1P11387 765 aaKnown RBP19.52■□□□□ 0.71
PTPRO-209ENST00000543886 TRAPPC10P48553 1259 aa19.52■□□□□ 0.71
PTPRO-209ENST00000543886 TPM4P67936 248 aa19.52■□□□□ 0.71
PTPRO-209ENST00000543886 PIK3AP1Q6ZUJ8 805 aa19.52■□□□□ 0.71
PTPRO-209ENST00000543886 METTL16Q86W50 562 aaKnown RBP19.52■□□□□ 0.71
PTPRO-209ENST00000543886 GPKOWQ92917 476 aaPredicted RBP eCLIP19.52■□□□□ 0.71
PTPRO-209ENST00000543886 POLR2DO15514 142 aaKnown RBP19.51■□□□□ 0.71
PTPRO-209ENST00000543886 PARP1P09874 1014 aaKnown RBP19.51■□□□□ 0.71
PTPRO-209ENST00000543886 VEGFAP15692 232 aaPredicted RBP19.51■□□□□ 0.71
PTPRO-209ENST00000543886 ZNF174Q15697 407 aa19.51■□□□□ 0.71
PTPRO-209ENST00000543886 HHIPL2Q6UWX4 724 aa19.51■□□□□ 0.71
PTPRO-209ENST00000543886 PODNQ7Z5L7 613 aa19.51■□□□□ 0.71
PTPRO-209ENST00000543886 CCDC148Q8NFR7 591 aa19.51■□□□□ 0.71
PTPRO-209ENST00000543886 CEP95Q96GE4 821 aa19.51■□□□□ 0.71
PTPRO-209ENST00000543886 DBNDD1Q9H9R9 158 aa19.51■□□□□ 0.71
PTPRO-209ENST00000543886 CLIP2Q9UDT6 1046 aa19.51■□□□□ 0.71
PTPRO-209ENST00000543886 RRP9O43818 475 aaKnown RBP19.5■□□□□ 0.71
PTPRO-209ENST00000543886 OFD1O75665 1012 aa19.5■□□□□ 0.71
PTPRO-209ENST00000543886 NOM1Q5C9Z4 860 aaKnown RBP19.5■□□□□ 0.71
PTPRO-209ENST00000543886 BLIDQ8IZY5 108 aa19.5■□□□□ 0.71
PTPRO-209ENST00000543886 PCDHA4Q9UN74 947 aa19.5■□□□□ 0.71
PTPRO-209ENST00000543886 ADAMTSL1Q8N6G6 1762 aa19.5■□□□□ 0.71
PTPRO-209ENST00000543886 MYH8P13535 1937 aa19.5■□□□□ 0.71
PTPRO-209ENST00000543886 PLIN4Q96Q06 1357 aa19.5■□□□□ 0.71
PTPRO-209ENST00000543886 KLRF2D3W0D1 207 aa19.5■□□□□ 0.71
PTPRO-209ENST00000543886 HEATR3Q7Z4Q2 680 aa19.5■□□□□ 0.71
PTPRO-209ENST00000543886 MRFAP1L1Q96HT8 127 aa19.5■□□□□ 0.71
PTPRO-209ENST00000543886 SMTNL1A8MU46 457 aa19.49■□□□□ 0.71
PTPRO-209ENST00000543886 GOLGA8HP0CJ92 632 aa19.49■□□□□ 0.71
PTPRO-209ENST00000543886 PTGS1P23219 599 aa19.49■□□□□ 0.71
PTPRO-209ENST00000543886 SLC15A2Q16348 729 aa19.49■□□□□ 0.71
PTPRO-209ENST00000543886 ISM2Q6H9L7 571 aa19.49■□□□□ 0.71
PTPRO-209ENST00000543886 KANK3Q6NY19 840 aa19.49■□□□□ 0.71
PTPRO-209ENST00000543886 SPZ1Q9BXG8 430 aa19.49■□□□□ 0.71
PTPRO-209ENST00000543886 DDX4Q9NQI0 724 aaKnown RBP19.49■□□□□ 0.71
PTPRO-209ENST00000543886 STK32BQ9NY57 414 aa19.49■□□□□ 0.71
PTPRO-209ENST00000543886 WNT7AO00755 349 aa19.48■□□□□ 0.71
PTPRO-209ENST00000543886 CYTH3O43739 400 aa19.48■□□□□ 0.71
PTPRO-209ENST00000543886 TPM2P07951 284 aa19.48■□□□□ 0.71
PTPRO-209ENST00000543886 POSTNQ15063 836 aa19.48■□□□□ 0.71
PTPRO-209ENST00000543886 WWC2Q6AWC2 1192 aa19.48■□□□□ 0.71
PTPRO-209ENST00000543886 GALNT17Q6IS24 598 aa19.48■□□□□ 0.71
PTPRO-209ENST00000543886 CDC42EP5Q6NZY7 148 aa19.48■□□□□ 0.71
PTPRO-209ENST00000543886 CNKSR1Q969H4 720 aa19.48■□□□□ 0.71
PTPRO-209ENST00000543886 CCDC34Q96HJ3 373 aa19.48■□□□□ 0.71
PTPRO-209ENST00000543886 SERTAD1Q9UHV2 236 aa19.48■□□□□ 0.71
PTPRO-209ENST00000543886 SLX4Q8IY92 1834 aa19.48■□□□□ 0.71
PTPRO-209ENST00000543886 ATP2C1P98194 919 aaPredicted RBP19.48■□□□□ 0.71
PTPRO-209ENST00000543886 GABPAQ06546 454 aa19.48■□□□□ 0.71
PTPRO-209ENST00000543886 CCDC186Q7Z3E2 898 aa19.48■□□□□ 0.71
PTPRO-209ENST00000543886 PDILTQ8N807 584 aa19.48■□□□□ 0.71
PTPRO-209ENST00000543886 KCNF1Q9H3M0 494 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms