RNA–Protein interactions for RNA: ENST00000543794.5

LPCAT3-211, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 2

Gene LPCAT3, Length 1,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-211ENST00000543794 ERC1Q8IUD2 1116 aa24.22■■□□□ 1.47
LPCAT3-211ENST00000543794 SHCBP1Q8NEM2 672 aa24.22■■□□□ 1.47
LPCAT3-211ENST00000543794 EVX2Q03828 476 aa24.21■■□□□ 1.47
LPCAT3-211ENST00000543794 TTF1Q15361 905 aaPredicted RBP24.21■■□□□ 1.47
LPCAT3-211ENST00000543794 GJC2Q5T442 439 aaPredicted RBP24.21■■□□□ 1.47
LPCAT3-211ENST00000543794 CRNKL1Q9BZJ0 848 aaKnown RBP24.21■■□□□ 1.47
LPCAT3-211ENST00000543794 MCM9Q9NXL9 1143 aa24.21■■□□□ 1.47
LPCAT3-211ENST00000543794 MPHOSPH10O00566 681 aaKnown RBP24.2■■□□□ 1.46
LPCAT3-211ENST00000543794 SEPT4O43236 478 aa24.2■■□□□ 1.46
LPCAT3-211ENST00000543794 COBLO75128 1261 aa24.2■■□□□ 1.46
LPCAT3-211ENST00000543794 ERCC3P19447 782 aa24.2■■□□□ 1.46
LPCAT3-211ENST00000543794 SLC9C2Q5TAH2 1124 aa24.2■■□□□ 1.46
LPCAT3-211ENST00000543794 SLC39A5Q6ZMH5 540 aa24.2■■□□□ 1.46
LPCAT3-211ENST00000543794 EXOC6BQ9Y2D4 811 aa24.2■■□□□ 1.46
LPCAT3-211ENST00000543794 PDE6AP16499 860 aa24.19■■□□□ 1.46
LPCAT3-211ENST00000543794 KIAA1755Q5JYT7 1200 aa24.19■■□□□ 1.46
LPCAT3-211ENST00000543794 MB21D1Q8N884 522 aa24.19■■□□□ 1.46
LPCAT3-211ENST00000543794 TANGO6Q9C0B7 1094 aa24.19■■□□□ 1.46
LPCAT3-211ENST00000543794 ATP11BQ9Y2G3 1177 aa24.19■■□□□ 1.46
LPCAT3-211ENST00000543794 DSG3P32926 999 aa24.18■■□□□ 1.46
LPCAT3-211ENST00000543794 TMEM179Q6ZVK1 233 aa24.18■■□□□ 1.46
LPCAT3-211ENST00000543794 ABRAQ8N0Z2 381 aa24.18■■□□□ 1.46
LPCAT3-211ENST00000543794 COL25A1Q9BXS0 654 aaPredicted RBP24.18■■□□□ 1.46
LPCAT3-211ENST00000543794 MROH8Q9H579 483 aa24.18■■□□□ 1.46
LPCAT3-211ENST00000543794 DCP1AQ9NPI6 582 aaPredicted RBP24.18■■□□□ 1.46
LPCAT3-211ENST00000543794 SLC5A4Q9NY91 659 aa24.18■■□□□ 1.46
LPCAT3-211ENST00000543794 FRMPD3Q5JV73 1810 aa24.17■■□□□ 1.46
LPCAT3-211ENST00000543794 KBTBD13C9JR72 458 aa24.17■■□□□ 1.46
LPCAT3-211ENST00000543794 SNX17Q15036 470 aa24.17■■□□□ 1.46
LPCAT3-211ENST00000543794 ANO1Q5XXA6 986 aa24.17■■□□□ 1.46
LPCAT3-211ENST00000543794 SIAH1Q8IUQ4 282 aa24.17■■□□□ 1.46
LPCAT3-211ENST00000543794 PHF6Q8IWS0 365 aaKnown RBP eCLIP24.17■■□□□ 1.46
LPCAT3-211ENST00000543794 FAM161BQ96MY7 647 aa24.17■■□□□ 1.46
LPCAT3-211ENST00000543794 ZNF532Q9HCE3 1301 aa24.16■■□□□ 1.46
LPCAT3-211ENST00000543794 TCRBV5S4A2TA0A5A2 114 aa24.16■■□□□ 1.46
LPCAT3-211ENST00000543794 SHHQ15465 462 aa24.16■■□□□ 1.46
LPCAT3-211ENST00000543794 HSP90AB4PQ58FF6 505 aa24.16■■□□□ 1.46
LPCAT3-211ENST00000543794 PRAMEF19Q5SWL8 479 aa24.16■■□□□ 1.46
LPCAT3-211ENST00000543794 ZNF697Q5TEC3 545 aa24.16■■□□□ 1.46
LPCAT3-211ENST00000543794 RHPN1Q8TCX5 695 aa24.16■■□□□ 1.46
LPCAT3-211ENST00000543794 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.16■■□□□ 1.46
LPCAT3-211ENST00000543794 SDR42E1Q8WUS8 393 aa24.16■■□□□ 1.46
LPCAT3-211ENST00000543794 IL1RAPL2Q9NP60 686 aa24.16■■□□□ 1.46
LPCAT3-211ENST00000543794 SWAP70Q9UH65 585 aa24.16■■□□□ 1.46
LPCAT3-211ENST00000543794 C1orf53Q5VUE5 145 aa24.15■■□□□ 1.46
LPCAT3-211ENST00000543794 SLC44A5Q8NCS7 719 aa24.15■■□□□ 1.46
LPCAT3-211ENST00000543794 TMX2Q9Y320 296 aa24.15■■□□□ 1.46
LPCAT3-211ENST00000543794 FLOT1O75955 427 aa24.14■■□□□ 1.45
LPCAT3-211ENST00000543794 CYP2D6P10635 497 aa24.14■■□□□ 1.45
LPCAT3-211ENST00000543794 PLS1Q14651 629 aa24.14■■□□□ 1.45
LPCAT3-211ENST00000543794 TRIM60Q495X7 471 aa24.14■■□□□ 1.45
LPCAT3-211ENST00000543794 NCAPG2Q86XI2 1143 aa24.14■■□□□ 1.45
LPCAT3-211ENST00000543794 LCORLQ8N3X6 602 aa24.14■■□□□ 1.45
LPCAT3-211ENST00000543794 ATG4CQ96DT6 458 aa24.14■■□□□ 1.45
LPCAT3-211ENST00000543794 MAML3Q96JK9 1138 aa24.14■■□□□ 1.45
LPCAT3-211ENST00000543794 ADCYAP1R1P41586 468 aa24.13■■□□□ 1.45
LPCAT3-211ENST00000543794 LRRC41Q15345 812 aa24.13■■□□□ 1.45
LPCAT3-211ENST00000543794 C9orf50Q5SZB4 431 aa24.13■■□□□ 1.45
LPCAT3-211ENST00000543794 BADQ92934 168 aa24.13■■□□□ 1.45
LPCAT3-211ENST00000543794 DYNLL2Q96FJ2 89 aa24.13■■□□□ 1.45
LPCAT3-211ENST00000543794 VCPKMTQ9H867 229 aa24.13■■□□□ 1.45
LPCAT3-211ENST00000543794 ARHGEF10LQ9HCE6 1279 aa24.13■■□□□ 1.45
LPCAT3-211ENST00000543794 PRDM5Q9NQX1 630 aaPredicted RBP24.13■■□□□ 1.45
LPCAT3-211ENST00000543794 VCANP13611 3396 aa24.12■■□□□ 1.45
LPCAT3-211ENST00000543794 ZNF236Q9UL36 1845 aa24.12■■□□□ 1.45
LPCAT3-211ENST00000543794 GOLIM4O00461 696 aa24.12■■□□□ 1.45
LPCAT3-211ENST00000543794 MYCNP04198 464 aaPredicted RBP24.12■■□□□ 1.45
LPCAT3-211ENST00000543794 FCER1AP12319 257 aa24.12■■□□□ 1.45
LPCAT3-211ENST00000543794 SPICE1Q8N0Z3 855 aa24.12■■□□□ 1.45
LPCAT3-211ENST00000543794 CLASRPQ8N2M8 674 aaKnown RBP24.12■■□□□ 1.45
LPCAT3-211ENST00000543794 SEMA6BQ9H3T3 888 aa24.12■■□□□ 1.45
LPCAT3-211ENST00000543794 SH2D4AQ9H788 454 aa24.12■■□□□ 1.45
LPCAT3-211ENST00000543794 PDLIM7Q9NR12 457 aa24.12■■□□□ 1.45
LPCAT3-211ENST00000543794 SLC25A27O95847 323 aa24.11■■□□□ 1.45
LPCAT3-211ENST00000543794 AKR1B1P15121 316 aa24.11■■□□□ 1.45
LPCAT3-211ENST00000543794 ICA1Q05084 483 aa24.11■■□□□ 1.45
LPCAT3-211ENST00000543794 SH3RF1Q7Z6J0 888 aa24.11■■□□□ 1.45
LPCAT3-211ENST00000543794 CLEC10AQ8IUN9 316 aa24.11■■□□□ 1.45
LPCAT3-211ENST00000543794 FERMT2Q96AC1 680 aa24.11■■□□□ 1.45
LPCAT3-211ENST00000543794 CCDC17Q96LX7 622 aa24.11■■□□□ 1.45
LPCAT3-211ENST00000543794 DNAJC2Q99543 621 aaKnown RBP24.11■■□□□ 1.45
LPCAT3-211ENST00000543794 CDX2Q99626 313 aaPredicted RBP24.11■■□□□ 1.45
LPCAT3-211ENST00000543794 ARMT1Q9H993 441 aa24.11■■□□□ 1.45
LPCAT3-211ENST00000543794 ATP8A2Q9NTI2 1148 aa24.11■■□□□ 1.45
LPCAT3-211ENST00000543794 NRBP1Q9UHY1 535 aa24.11■■□□□ 1.45
LPCAT3-211ENST00000543794 ADAMTS5Q9UNA0 930 aa24.11■■□□□ 1.45
LPCAT3-211ENST00000543794 RLFQ13129 1914 aa24.11■■□□□ 1.45
LPCAT3-211ENST00000543794 EYSQ5T1H1 3165 aa24.1■■□□□ 1.45
LPCAT3-211ENST00000543794 TRIM43BA6NCK2 446 aa24.1■■□□□ 1.45
LPCAT3-211ENST00000543794 WDR46O15213 610 aaKnown RBP24.1■■□□□ 1.45
LPCAT3-211ENST00000543794 TMEM132BQ14DG7 1078 aa24.1■■□□□ 1.45
LPCAT3-211ENST00000543794 FAM47AQ5JRC9 791 aa24.1■■□□□ 1.45
LPCAT3-211ENST00000543794 TRIM43Q96BQ3 446 aaPredicted RBP24.1■■□□□ 1.45
LPCAT3-211ENST00000543794 KIF1BPQ96EK5 621 aa24.1■■□□□ 1.45
LPCAT3-211ENST00000543794 PRKAB2O43741 272 aa24.09■■□□□ 1.45
LPCAT3-211ENST00000543794 SMAD3P84022 425 aaKnown RBP24.09■■□□□ 1.45
LPCAT3-211ENST00000543794 PHF24Q9UPV7 400 aa24.09■■□□□ 1.45
LPCAT3-211ENST00000543794 IFIT2P09913 472 aaKnown RBP24.08■■□□□ 1.45
LPCAT3-211ENST00000543794 CDK8P49336 464 aa24.08■■□□□ 1.45
LPCAT3-211ENST00000543794 TLE2Q04725 743 aa24.08■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms