RNA–Protein interactions for RNA: ENST00000543233.2

CDH4-201, Transcript of cadherin 4, humanhuman

TSL 2 BASIC

Gene CDH4, Length 3,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-201ENST00000543233 PPFIA2O75334 1257 aa12.69□□□□□ -0.38
CDH4-201ENST00000543233 CSF1RP07333 972 aa12.69□□□□□ -0.38
CDH4-201ENST00000543233 VSNL1P62760 191 aa12.69□□□□□ -0.38
CDH4-201ENST00000543233 MAP3K9P80192 1104 aa12.69□□□□□ -0.38
CDH4-201ENST00000543233 DDB1Q16531 1140 aa12.69□□□□□ -0.38
CDH4-201ENST00000543233 CCDC40Q4G0X9 1142 aa12.69□□□□□ -0.38
CDH4-201ENST00000543233 SUSD4Q5VX71 490 aa12.69□□□□□ -0.38
CDH4-201ENST00000543233 MICU3Q86XE3 530 aa12.69□□□□□ -0.38
CDH4-201ENST00000543233 MYLK4Q86YV6 388 aaPredicted RBP12.69□□□□□ -0.38
CDH4-201ENST00000543233 ANAPC4Q9UJX5 808 aa12.69□□□□□ -0.38
CDH4-201ENST00000543233 XIRP1Q702N8 1843 aaKnown RBP12.69□□□□□ -0.38
CDH4-201ENST00000543233 LTBP4Q8N2S1 1624 aa12.69□□□□□ -0.38
CDH4-201ENST00000543233 JCADQ9P266 1359 aa12.69□□□□□ -0.38
CDH4-201ENST00000543233 B4E1Z4 1266 aa12.68□□□□□ -0.38
CDH4-201ENST00000543233 CDC25CP30307 473 aa12.68□□□□□ -0.38
CDH4-201ENST00000543233 CCDC96Q2M329 555 aa12.68□□□□□ -0.38
CDH4-201ENST00000543233 MIGA1Q8NAN2 632 aa12.68□□□□□ -0.38
CDH4-201ENST00000543233 SENP2Q9HC62 589 aa12.68□□□□□ -0.38
CDH4-201ENST00000543233 TPD52L2O43399 206 aaKnown RBP12.68□□□□□ -0.38
CDH4-201ENST00000543233 KCNQ2O43526 872 aa12.68□□□□□ -0.38
CDH4-201ENST00000543233 AKAP17AQ02040 695 aaKnown RBP12.68□□□□□ -0.38
CDH4-201ENST00000543233 LAMB3Q13751 1172 aa12.68□□□□□ -0.38
CDH4-201ENST00000543233 CCAR1Q8IX12 1150 aaKnown RBP12.68□□□□□ -0.38
CDH4-201ENST00000543233 AIDAQ96BJ3 306 aa12.68□□□□□ -0.38
CDH4-201ENST00000543233 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.68□□□□□ -0.38
CDH4-201ENST00000543233 TMX4Q9H1E5 349 aaPredicted RBP12.68□□□□□ -0.38
CDH4-201ENST00000543233 ANKZF1Q9H8Y5 726 aa12.68□□□□□ -0.38
CDH4-201ENST00000543233 POTEB2H3BUK9 544 aa12.68□□□□□ -0.38
CDH4-201ENST00000543233 PDE8BO95263 885 aa12.68□□□□□ -0.38
CDH4-201ENST00000543233 HSPA1LP34931 641 aa12.68□□□□□ -0.38
CDH4-201ENST00000543233 ADD1P35611 737 aaKnown RBP12.68□□□□□ -0.38
CDH4-201ENST00000543233 IRAK1P51617 712 aa12.68□□□□□ -0.38
CDH4-201ENST00000543233 MAGEB6Q8N7X4 407 aa12.68□□□□□ -0.38
CDH4-201ENST00000543233 TBC1D31Q96DN5 1066 aa12.68□□□□□ -0.38
CDH4-201ENST00000543233 ZKSCAN3Q9BRR0 538 aa12.68□□□□□ -0.38
CDH4-201ENST00000543233 NIP7Q9Y221 180 aaKnown RBP eCLIP12.68□□□□□ -0.38
CDH4-201ENST00000543233 GOLGA6CA6NDK9 693 aa12.67□□□□□ -0.38
CDH4-201ENST00000543233 PDE8AO60658 829 aa12.67□□□□□ -0.38
CDH4-201ENST00000543233 GOLGA6DP0CG33 693 aa12.67□□□□□ -0.38
CDH4-201ENST00000543233 MYBL1P10243 752 aa12.67□□□□□ -0.38
CDH4-201ENST00000543233 BCAMP50895 628 aa12.67□□□□□ -0.38
CDH4-201ENST00000543233 TRIM28Q13263 835 aaKnown RBP12.67□□□□□ -0.38
CDH4-201ENST00000543233 CAPRIN2Q6IMN6 1127 aaKnown RBP12.67□□□□□ -0.38
CDH4-201ENST00000543233 AMOTL1Q8IY63 956 aa12.67□□□□□ -0.38
CDH4-201ENST00000543233 PDILTQ8N807 584 aa12.67□□□□□ -0.38
CDH4-201ENST00000543233 PHKBQ93100 1093 aa12.67□□□□□ -0.38
CDH4-201ENST00000543233 CCDC114Q96M63 670 aa12.67□□□□□ -0.38
CDH4-201ENST00000543233 CAPS2Q9BXY5 557 aa12.67□□□□□ -0.38
CDH4-201ENST00000543233 ANO10Q9NW15 660 aa12.67□□□□□ -0.38
CDH4-201ENST00000543233 GOLGA6AQ9NYA3 693 aa12.67□□□□□ -0.38
CDH4-201ENST00000543233 ABCF2Q9UG63 623 aa12.67□□□□□ -0.38
CDH4-201ENST00000543233 PKD1L3Q7Z443 1732 aa12.67□□□□□ -0.38
CDH4-201ENST00000543233 UBE2Q2LH0YL09 131 aa12.67□□□□□ -0.38
CDH4-201ENST00000543233 FDPSP14324 419 aaKnown RBP12.67□□□□□ -0.38
CDH4-201ENST00000543233 CTDSPL2Q05D32 466 aa12.67□□□□□ -0.38
CDH4-201ENST00000543233 FAM182BQ5T319 152 aa12.67□□□□□ -0.38
CDH4-201ENST00000543233 DRAXINQ8NBI3 349 aaPredicted RBP12.67□□□□□ -0.38
CDH4-201ENST00000543233 ACRBPQ8NEB7 543 aa12.67□□□□□ -0.38
CDH4-201ENST00000543233 B4GALNT2Q8NHY0 566 aa12.67□□□□□ -0.38
CDH4-201ENST00000543233 NCOA7Q8NI08 942 aa12.67□□□□□ -0.38
CDH4-201ENST00000543233 C8orf76Q96K31 380 aa12.67□□□□□ -0.38
CDH4-201ENST00000543233 ALDH8A1Q9H2A2 487 aaPredicted RBP12.67□□□□□ -0.38
CDH4-201ENST00000543233 ARMT1Q9H993 441 aa12.67□□□□□ -0.38
CDH4-201ENST00000543233 LMCD1Q9NZU5 365 aa12.67□□□□□ -0.38
CDH4-201ENST00000543233 CFAP45Q9UL16 551 aa12.67□□□□□ -0.38
CDH4-201ENST00000543233 GLI3P10071 1580 aa12.67□□□□□ -0.38
CDH4-201ENST00000543233 GOLGB1Q14789 3259 aaKnown RBP12.67□□□□□ -0.38
CDH4-201ENST00000543233 PRKAB2O43741 272 aa12.66□□□□□ -0.38
CDH4-201ENST00000543233 ZNF202O95125 648 aa12.66□□□□□ -0.38
CDH4-201ENST00000543233 PYGBP11216 843 aa12.66□□□□□ -0.38
CDH4-201ENST00000543233 PRPHP41219 470 aa12.66□□□□□ -0.38
CDH4-201ENST00000543233 CRKLP46109 303 aaKnown RBP12.66□□□□□ -0.38
CDH4-201ENST00000543233 ANTXR2P58335 489 aa12.66□□□□□ -0.38
CDH4-201ENST00000543233 WLSQ5T9L3 541 aa12.66□□□□□ -0.38
CDH4-201ENST00000543233 TBC1D10CQ8IV04 446 aa12.66□□□□□ -0.38
CDH4-201ENST00000543233 DHX40Q8IX18 779 aaKnown RBP12.66□□□□□ -0.38
CDH4-201ENST00000543233 SMARCC2Q8TAQ2 1214 aa12.66□□□□□ -0.38
CDH4-201ENST00000543233 PPP2R2CQ9Y2T4 447 aa12.66□□□□□ -0.38
CDH4-201ENST00000543233 A0A1B0GVL5 298 aa12.66□□□□□ -0.38
CDH4-201ENST00000543233 VWA3AA6NCI4 1184 aa12.66□□□□□ -0.38
CDH4-201ENST00000543233 PDE6AP16499 860 aa12.66□□□□□ -0.38
CDH4-201ENST00000543233 SRGAP1Q7Z6B7 1085 aa12.66□□□□□ -0.38
CDH4-201ENST00000543233 FSIP1Q8NA03 581 aa12.66□□□□□ -0.38
CDH4-201ENST00000543233 TNS2Q63HR2 1409 aa12.66□□□□□ -0.38
CDH4-201ENST00000543233 MBD4O95243 580 aa12.66□□□□□ -0.38
CDH4-201ENST00000543233 ZFYP08048 801 aaPredicted RBP12.66□□□□□ -0.38
CDH4-201ENST00000543233 ARHGAP25P42331 645 aa12.66□□□□□ -0.38
CDH4-201ENST00000543233 CCDC73Q6ZRK6 1079 aa12.66□□□□□ -0.38
CDH4-201ENST00000543233 HNRNPLLQ8WVV9 542 aaKnown RBP12.66□□□□□ -0.38
CDH4-201ENST00000543233 ZCWPW1Q9H0M4 648 aa12.66□□□□□ -0.38
CDH4-201ENST00000543233 GOLPH3LQ9H4A5 285 aa12.66□□□□□ -0.38
CDH4-201ENST00000543233 PES1O00541 588 aaKnown RBP12.65□□□□□ -0.38
CDH4-201ENST00000543233 ZEB2O60315 1214 aa12.65□□□□□ -0.38
CDH4-201ENST00000543233 ATP2C2O75185 946 aa12.65□□□□□ -0.38
CDH4-201ENST00000543233 FNTAP49354 379 aa12.65□□□□□ -0.38
CDH4-201ENST00000543233 RASGRF1Q13972 1273 aa12.65□□□□□ -0.38
CDH4-201ENST00000543233 B4GALNT4Q76KP1 1039 aa12.65□□□□□ -0.38
CDH4-201ENST00000543233 CMTR1Q8N1G2 835 aaKnown RBP12.65□□□□□ -0.38
CDH4-201ENST00000543233 SLC40A1Q9NP59 571 aa12.65□□□□□ -0.38
CDH4-201ENST00000543233 CARMIL3Q8ND23 1372 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms