RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 RAPGEF3O95398 923 aa5.22□□□□□ -1.57
SFSWAP-211ENST00000542813 GSTP1P09211 210 aaKnown RBP5.22□□□□□ -1.57
SFSWAP-211ENST00000542813 ESRRAP11474 423 aaPredicted RBP5.22□□□□□ -1.57
SFSWAP-211ENST00000542813 NME1P15531 152 aaKnown RBP5.22□□□□□ -1.57
SFSWAP-211ENST00000542813 GLB1P16278 677 aa5.22□□□□□ -1.57
SFSWAP-211ENST00000542813 SSTR4P31391 388 aa5.22□□□□□ -1.57
SFSWAP-211ENST00000542813 L1CAMP32004 1257 aa5.22□□□□□ -1.57
SFSWAP-211ENST00000542813 AP3B2Q13367 1082 aa5.22□□□□□ -1.57
SFSWAP-211ENST00000542813 PPP2R5AQ15172 486 aa5.22□□□□□ -1.57
SFSWAP-211ENST00000542813 FNDC3BQ53EP0 1204 aaKnown RBP5.22□□□□□ -1.57
SFSWAP-211ENST00000542813 AKAP4Q5JQC9 854 aa5.22□□□□□ -1.57
SFSWAP-211ENST00000542813 INTS3Q68E01 1043 aaKnown RBP5.22□□□□□ -1.57
SFSWAP-211ENST00000542813 KIAA1211LQ6NV74 962 aa5.22□□□□□ -1.57
SFSWAP-211ENST00000542813 NLRC3Q7RTR2 1065 aa5.22□□□□□ -1.57
SFSWAP-211ENST00000542813 AGGF1Q8N302 714 aaeCLIP5.22□□□□□ -1.57
SFSWAP-211ENST00000542813 AFAP1L2Q8N4X5 818 aa5.22□□□□□ -1.57
SFSWAP-211ENST00000542813 ATL2Q8NHH9 583 aa5.22□□□□□ -1.57
SFSWAP-211ENST00000542813 ATG4CQ96DT6 458 aa5.22□□□□□ -1.57
SFSWAP-211ENST00000542813 ACSBG1Q96GR2 724 aa5.22□□□□□ -1.57
SFSWAP-211ENST00000542813 RUSC1Q9BVN2 902 aa5.22□□□□□ -1.57
SFSWAP-211ENST00000542813 REV1Q9UBZ9 1251 aa5.22□□□□□ -1.57
SFSWAP-211ENST00000542813 PCDHA4Q9UN74 947 aa5.22□□□□□ -1.57
SFSWAP-211ENST00000542813 CORINQ9Y5Q5 1042 aa5.22□□□□□ -1.57
SFSWAP-211ENST00000542813 WASHC2CQ9Y4E1 1318 aa5.22□□□□□ -1.57
SFSWAP-211ENST00000542813 COL17A1Q9UMD9 1497 aaPredicted RBP5.21□□□□□ -1.58
SFSWAP-211ENST00000542813 FAM86C2PA6NEL3 165 aa5.21□□□□□ -1.58
SFSWAP-211ENST00000542813 FAM177BA6PVY3 158 aa5.21□□□□□ -1.58
SFSWAP-211ENST00000542813 GFRA2O00451 464 aa5.21□□□□□ -1.58
SFSWAP-211ENST00000542813 TNFRSF10CO14798 259 aa5.21□□□□□ -1.58
SFSWAP-211ENST00000542813 IGLV1-40P01703 118 aa5.21□□□□□ -1.58
SFSWAP-211ENST00000542813 PLCG1P19174 1290 aa5.21□□□□□ -1.58
SFSWAP-211ENST00000542813 GNALP38405 381 aa5.21□□□□□ -1.58
SFSWAP-211ENST00000542813 GUCY2FP51841 1108 aa5.21□□□□□ -1.58
SFSWAP-211ENST00000542813 SLC7A5Q01650 507 aa5.21□□□□□ -1.58
SFSWAP-211ENST00000542813 BIRC2Q13490 618 aa5.21□□□□□ -1.58
SFSWAP-211ENST00000542813 IKBKEQ14164 716 aa5.21□□□□□ -1.58
SFSWAP-211ENST00000542813 FOXB2Q5VYV0 432 aa5.21□□□□□ -1.58
SFSWAP-211ENST00000542813 KLHL6Q8WZ60 621 aa5.21□□□□□ -1.58
SFSWAP-211ENST00000542813 KISS1RQ969F8 398 aaPredicted RBP5.21□□□□□ -1.58
SFSWAP-211ENST00000542813 EXOC2Q96KP1 924 aa5.21□□□□□ -1.58
SFSWAP-211ENST00000542813 IPO9Q96P70 1041 aaKnown RBP5.21□□□□□ -1.58
SFSWAP-211ENST00000542813 RPS6KC1Q96S38 1066 aa5.21□□□□□ -1.58
SFSWAP-211ENST00000542813 SLC9A7Q96T83 725 aa5.21□□□□□ -1.58
SFSWAP-211ENST00000542813 CDC6Q99741 560 aa5.21□□□□□ -1.58
SFSWAP-211ENST00000542813 DHRS4Q9BTZ2 278 aa5.21□□□□□ -1.58
SFSWAP-211ENST00000542813 TARS2Q9BW92 718 aaKnown RBP5.21□□□□□ -1.58
SFSWAP-211ENST00000542813 CEP41Q9BYV8 373 aa5.21□□□□□ -1.58
SFSWAP-211ENST00000542813 ADAM19Q9H013 955 aa5.21□□□□□ -1.58
SFSWAP-211ENST00000542813 CACNA2D2Q9NY47 1150 aa5.21□□□□□ -1.58
SFSWAP-211ENST00000542813 MRPS23Q9Y3D9 190 aaKnown RBP5.21□□□□□ -1.58
SFSWAP-211ENST00000542813 SNCAIPQ9Y6H5 919 aa5.21□□□□□ -1.58
SFSWAP-211ENST00000542813 MYO15BQ96JP2 1530 aa5.21□□□□□ -1.58
SFSWAP-211ENST00000542813 SLC22A31A6NKX4 558 aa5.2□□□□□ -1.58
SFSWAP-211ENST00000542813 LINC01387J3KSC0 135 aa5.2□□□□□ -1.58
SFSWAP-211ENST00000542813 DHX15O43143 795 aaKnown RBP5.2□□□□□ -1.58
SFSWAP-211ENST00000542813 RASGRP1O95267 797 aa5.2□□□□□ -1.58
SFSWAP-211ENST00000542813 CPEP16870 476 aa5.2□□□□□ -1.58
SFSWAP-211ENST00000542813 UVSSAQ2YD98 709 aa5.2□□□□□ -1.58
SFSWAP-211ENST00000542813 GNPTABQ3T906 1256 aa5.2□□□□□ -1.58
SFSWAP-211ENST00000542813 CDCP2Q5VXM1 449 aa5.2□□□□□ -1.58
SFSWAP-211ENST00000542813 GALNT11Q8NCW6 608 aa5.2□□□□□ -1.58
SFSWAP-211ENST00000542813 RIN3Q8TB24 985 aa5.2□□□□□ -1.58
SFSWAP-211ENST00000542813 GPBAR1Q8TDU6 330 aa5.2□□□□□ -1.58
SFSWAP-211ENST00000542813 PLPPR2Q96GM1 343 aa5.2□□□□□ -1.58
SFSWAP-211ENST00000542813 CLUHP3Q96NS8 147 aa5.2□□□□□ -1.58
SFSWAP-211ENST00000542813 UBL7Q96S82 380 aaPredicted RBP5.2□□□□□ -1.58
SFSWAP-211ENST00000542813 ZC3H12CQ9C0D7 883 aaKnown RBP5.2□□□□□ -1.58
SFSWAP-211ENST00000542813 LACRTQ9GZZ8 138 aa5.2□□□□□ -1.58
SFSWAP-211ENST00000542813 CNNM2Q9H8M5 875 aa5.2□□□□□ -1.58
SFSWAP-211ENST00000542813 STOML1Q9UBI4 398 aa5.2□□□□□ -1.58
SFSWAP-211ENST00000542813 DNAJC25-GNG10A0A024R161 153 aa5.19□□□□□ -1.58
SFSWAP-211ENST00000542813 TRBV23-1A0A0A0MS06 115 aa5.19□□□□□ -1.58
SFSWAP-211ENST00000542813 TRAV20A0A0B4J274 112 aa5.19□□□□□ -1.58
SFSWAP-211ENST00000542813 A0A1W2PQU0 124 aa5.19□□□□□ -1.58
SFSWAP-211ENST00000542813 KIAA1324LA8MWY0 1029 aaPredicted RBP5.19□□□□□ -1.58
SFSWAP-211ENST00000542813 PAX4O43316 350 aa5.19□□□□□ -1.58
SFSWAP-211ENST00000542813 PLIN1O60240 522 aa5.19□□□□□ -1.58
SFSWAP-211ENST00000542813 DNAJA2O60884 412 aa5.19□□□□□ -1.58
SFSWAP-211ENST00000542813 COBLO75128 1261 aa5.19□□□□□ -1.58
SFSWAP-211ENST00000542813 CAND2O75155 1236 aa5.19□□□□□ -1.58
SFSWAP-211ENST00000542813 KATNA1O75449 491 aa5.19□□□□□ -1.58
SFSWAP-211ENST00000542813 CD68P34810 354 aaPredicted RBP5.19□□□□□ -1.58
SFSWAP-211ENST00000542813 CCNFP41002 786 aa5.19□□□□□ -1.58
SFSWAP-211ENST00000542813 CABP4P57796 275 aa5.19□□□□□ -1.58
SFSWAP-211ENST00000542813 PDE4BQ07343 736 aa5.19□□□□□ -1.58
SFSWAP-211ENST00000542813 MCL1Q07820 350 aa5.19□□□□□ -1.58
SFSWAP-211ENST00000542813 INPP5AQ14642 412 aa5.19□□□□□ -1.58
SFSWAP-211ENST00000542813 SV2CQ496J9 727 aa5.19□□□□□ -1.58
SFSWAP-211ENST00000542813 MAP9Q49MG5 647 aa5.19□□□□□ -1.58
SFSWAP-211ENST00000542813 FAM209AQ5JX71 171 aa5.19□□□□□ -1.58
SFSWAP-211ENST00000542813 CNNM4Q6P4Q7 775 aa5.19□□□□□ -1.58
SFSWAP-211ENST00000542813 LRFN4Q6PJG9 635 aa5.19□□□□□ -1.58
SFSWAP-211ENST00000542813 HDXQ7Z353 690 aa5.19□□□□□ -1.58
SFSWAP-211ENST00000542813 LRRTM3Q86VH5 581 aa5.19□□□□□ -1.58
SFSWAP-211ENST00000542813 MRPL4Q9BYD3 311 aaKnown RBP5.19□□□□□ -1.58
SFSWAP-211ENST00000542813 ASPSCR1Q9BZE9 553 aa5.19□□□□□ -1.58
SFSWAP-211ENST00000542813 ARHGEF4Q9NR80 690 aa5.19□□□□□ -1.58
SFSWAP-211ENST00000542813 SH2B1Q9NRF2 756 aaPredicted RBP5.19□□□□□ -1.58
SFSWAP-211ENST00000542813 INTS7Q9NVH2 962 aaKnown RBP5.19□□□□□ -1.58
SFSWAP-211ENST00000542813 KLHL3Q9UH77 587 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms