RNA–Protein interactions for RNA: ENST00000542714.5

CHFR-221, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 542 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-221ENST00000542714 STAG2Q8N3U4 1231 aa15.43■□□□□ 0.06
CHFR-221ENST00000542714 CTCFLQ8NI51 663 aaPredicted RBP15.43■□□□□ 0.06
CHFR-221ENST00000542714 DEFB129Q9H1M3 183 aa15.43■□□□□ 0.06
CHFR-221ENST00000542714 NYAP2Q9P242 653 aa15.43■□□□□ 0.06
CHFR-221ENST00000542714 CLIP2Q9UDT6 1046 aa15.43■□□□□ 0.06
CHFR-221ENST00000542714 KIF3AQ9Y496 699 aa15.43■□□□□ 0.06
CHFR-221ENST00000542714 PALM3A6NDB9 673 aaPredicted RBP15.42■□□□□ 0.06
CHFR-221ENST00000542714 PHF20L1A8MW92 1017 aa15.42■□□□□ 0.06
CHFR-221ENST00000542714 SNHG28P0DPA3 235 aa15.42■□□□□ 0.06
CHFR-221ENST00000542714 EEF2P13639 858 aaKnown RBP15.42■□□□□ 0.06
CHFR-221ENST00000542714 PDIA4P13667 645 aaKnown RBP15.42■□□□□ 0.06
CHFR-221ENST00000542714 RESTQ13127 1097 aa15.42■□□□□ 0.06
CHFR-221ENST00000542714 NBPF12Q5TAG4 269 aaPredicted RBP15.42■□□□□ 0.06
CHFR-221ENST00000542714 OTUD7BQ6GQQ9 843 aa15.42■□□□□ 0.06
CHFR-221ENST00000542714 CCDC82Q8N4S0 544 aa15.42■□□□□ 0.06
CHFR-221ENST00000542714 ALG1Q9BT22 464 aa15.42■□□□□ 0.06
CHFR-221ENST00000542714 RNF26Q9BY78 433 aaPredicted RBP15.42■□□□□ 0.06
CHFR-221ENST00000542714 KANSL2Q9H9L4 492 aa15.42■□□□□ 0.06
CHFR-221ENST00000542714 GJB4Q9NTQ9 266 aa15.42■□□□□ 0.06
CHFR-221ENST00000542714 ZBTB21Q9ULJ3 1066 aa15.42■□□□□ 0.06
CHFR-221ENST00000542714 MTMR7Q9Y216 660 aa15.42■□□□□ 0.06
CHFR-221ENST00000542714 PITPNM2Q9BZ72 1349 aa15.42■□□□□ 0.06
CHFR-221ENST00000542714 PHIPQ8WWQ0 1821 aa15.41■□□□□ 0.06
CHFR-221ENST00000542714 GLTPD2A6NH11 291 aa15.41■□□□□ 0.06
CHFR-221ENST00000542714 USP17L5A8MUK1 530 aa15.41■□□□□ 0.06
CHFR-221ENST00000542714 PRPF3O43395 683 aaKnown RBP15.41■□□□□ 0.06
CHFR-221ENST00000542714 PDHBP11177 359 aa15.41■□□□□ 0.06
CHFR-221ENST00000542714 KIF5BP33176 963 aa15.41■□□□□ 0.06
CHFR-221ENST00000542714 MCM4P33991 863 aa15.41■□□□□ 0.06
CHFR-221ENST00000542714 GUCY1B3Q02153 619 aa15.41■□□□□ 0.06
CHFR-221ENST00000542714 ICA1Q05084 483 aa15.41■□□□□ 0.06
CHFR-221ENST00000542714 PKN1Q16512 942 aa15.41■□□□□ 0.06
CHFR-221ENST00000542714 PPP4R3BQ5MIZ7 849 aa15.41■□□□□ 0.06
CHFR-221ENST00000542714 DPY19L2Q6NUT2 758 aa15.41■□□□□ 0.06
CHFR-221ENST00000542714 MKL1Q969V6 931 aa15.41■□□□□ 0.06
CHFR-221ENST00000542714 SHISA4Q96DD7 197 aa15.41■□□□□ 0.06
CHFR-221ENST00000542714 C8orf76Q96K31 380 aa15.41■□□□□ 0.06
CHFR-221ENST00000542714 OTOFQ9HC10 1997 aa15.41■□□□□ 0.06
CHFR-221ENST00000542714 H3BQV1 296 aa15.4■□□□□ 0.06
CHFR-221ENST00000542714 DEXIO95424 95 aa15.4■□□□□ 0.06
CHFR-221ENST00000542714 GOLGA8HP0CJ92 632 aa15.4■□□□□ 0.06
CHFR-221ENST00000542714 CAP2P40123 477 aa15.4■□□□□ 0.06
CHFR-221ENST00000542714 IFFO2Q5TF58 517 aa15.4■□□□□ 0.06
CHFR-221ENST00000542714 USP17L2Q6R6M4 530 aa15.4■□□□□ 0.06
CHFR-221ENST00000542714 FERMT3Q86UX7 667 aa15.4■□□□□ 0.06
CHFR-221ENST00000542714 TRIM22Q8IYM9 498 aa15.4■□□□□ 0.06
CHFR-221ENST00000542714 RGS22Q8NE09 1264 aa15.4■□□□□ 0.06
CHFR-221ENST00000542714 FBXO18Q8NFZ0 1043 aa15.4■□□□□ 0.06
CHFR-221ENST00000542714 GBP4Q96PP9 640 aa15.4■□□□□ 0.06
CHFR-221ENST00000542714 CABP5Q9NP86 173 aa15.4■□□□□ 0.06
CHFR-221ENST00000542714 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.4■□□□□ 0.06
CHFR-221ENST00000542714 PPP2R3BQ9Y5P8 575 aa15.4■□□□□ 0.06
CHFR-221ENST00000542714 hCG_1642624A0A1W2PR95 340 aa15.39■□□□□ 0.05
CHFR-221ENST00000542714 POTECB2RU33 542 aa15.39■□□□□ 0.05
CHFR-221ENST00000542714 PARP1P09874 1014 aaKnown RBP15.39■□□□□ 0.05
CHFR-221ENST00000542714 GNAQP50148 359 aa15.39■□□□□ 0.05
CHFR-221ENST00000542714 ATP2B2Q01814 1243 aa15.39■□□□□ 0.05
CHFR-221ENST00000542714 PRAMEF18Q5VWM3 479 aa15.39■□□□□ 0.05
CHFR-221ENST00000542714 V9GY48 417 aaPredicted RBP15.39■□□□□ 0.05
CHFR-221ENST00000542714 A0A1W2PRG0 241 aa15.38■□□□□ 0.05
CHFR-221ENST00000542714 CYTH3O43739 400 aa15.38■□□□□ 0.05
CHFR-221ENST00000542714 EPHX2P34913 555 aa15.38■□□□□ 0.05
CHFR-221ENST00000542714 ZNF543Q08ER8 600 aa15.38■□□□□ 0.05
CHFR-221ENST00000542714 KRT40Q6A162 431 aa15.38■□□□□ 0.05
CHFR-221ENST00000542714 USP50Q70EL3 339 aaPredicted RBP15.38■□□□□ 0.05
CHFR-221ENST00000542714 CPVLQ9H3G5 476 aa15.38■□□□□ 0.05
CHFR-221ENST00000542714 FRMPD2Q68DX3 1309 aaPredicted RBP15.38■□□□□ 0.05
CHFR-221ENST00000542714 KIF28PB7ZC32 967 aa15.37■□□□□ 0.05
CHFR-221ENST00000542714 KLRF2D3W0D1 207 aa15.37■□□□□ 0.05
CHFR-221ENST00000542714 VEGFAP15692 232 aaPredicted RBP15.37■□□□□ 0.05
CHFR-221ENST00000542714 FOXD4L6Q3SYB3 417 aaPredicted RBP15.37■□□□□ 0.05
CHFR-221ENST00000542714 ASPRV1Q53RT3 343 aa15.37■□□□□ 0.05
CHFR-221ENST00000542714 FAM173BQ6P4H8 233 aa15.37■□□□□ 0.05
CHFR-221ENST00000542714 DLK2Q6UY11 383 aa15.37■□□□□ 0.05
CHFR-221ENST00000542714 FOXD4L3Q6VB84 417 aaPredicted RBP15.37■□□□□ 0.05
CHFR-221ENST00000542714 ACER1Q8TDN7 264 aa15.37■□□□□ 0.05
CHFR-221ENST00000542714 WASF1Q92558 559 aa15.37■□□□□ 0.05
CHFR-221ENST00000542714 LZTS2Q9BRK4 669 aa15.37■□□□□ 0.05
CHFR-221ENST00000542714 SPZ1Q9BXG8 430 aa15.37■□□□□ 0.05
CHFR-221ENST00000542714 ZNF112Q9UJU3 913 aa15.37■□□□□ 0.05
CHFR-221ENST00000542714 ADM5C9JUS6 153 aa15.36■□□□□ 0.05
CHFR-221ENST00000542714 SMARCA1P28370 1054 aa15.36■□□□□ 0.05
CHFR-221ENST00000542714 INPP5BP32019 993 aa15.36■□□□□ 0.05
CHFR-221ENST00000542714 ECE1P42892 770 aa15.36■□□□□ 0.05
CHFR-221ENST00000542714 NBR1Q14596 966 aa15.36■□□□□ 0.05
CHFR-221ENST00000542714 PFKFB3Q16875 520 aaPredicted RBP15.36■□□□□ 0.05
CHFR-221ENST00000542714 KIAA1755Q5JYT7 1200 aa15.36■□□□□ 0.05
CHFR-221ENST00000542714 DCAF15Q66K64 600 aa15.36■□□□□ 0.05
CHFR-221ENST00000542714 SLFN13Q68D06 897 aa15.36■□□□□ 0.05
CHFR-221ENST00000542714 MCTP1Q6DN14 999 aa15.36■□□□□ 0.05
CHFR-221ENST00000542714 CCDC84Q86UT8 332 aaPredicted RBP15.36■□□□□ 0.05
CHFR-221ENST00000542714 GMCL1P1Q8NEA9 526 aa15.36■□□□□ 0.05
CHFR-221ENST00000542714 DCAF4Q8WV16 495 aa15.36■□□□□ 0.05
CHFR-221ENST00000542714 ZNF341Q9BYN7 854 aa15.36■□□□□ 0.05
CHFR-221ENST00000542714 TAF1DQ9H5J8 278 aaPredicted RBP15.36■□□□□ 0.05
CHFR-221ENST00000542714 GPCPD1Q9NPB8 672 aa15.36■□□□□ 0.05
CHFR-221ENST00000542714 SYNPO2Q9UMS6 1093 aa15.36■□□□□ 0.05
CHFR-221ENST00000542714 FZD1Q9UP38 647 aa15.36■□□□□ 0.05
CHFR-221ENST00000542714 CTNND1O60716 968 aaKnown RBP15.35■□□□□ 0.05
CHFR-221ENST00000542714 NDUFB10O96000 172 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms