RNA–Protein interactions for RNA: ENST00000542661.1

DDX11-221, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-221ENST00000542661 ADGRA2Q96PE1 1338 aa16.77■□□□□ 0.28
DDX11-221ENST00000542661 VCAM1P19320 739 aa16.77■□□□□ 0.28
DDX11-221ENST00000542661 PTH1RQ03431 593 aa16.77■□□□□ 0.28
DDX11-221ENST00000542661 CLEC10AQ8IUN9 316 aa16.77■□□□□ 0.28
DDX11-221ENST00000542661 GTF3C2Q8WUA4 911 aaPredicted RBP16.77■□□□□ 0.28
DDX11-221ENST00000542661 ESR2Q92731 530 aa16.77■□□□□ 0.28
DDX11-221ENST00000542661 MAP4K1Q92918 833 aa16.77■□□□□ 0.28
DDX11-221ENST00000542661 MKL1Q969V6 931 aa16.77■□□□□ 0.28
DDX11-221ENST00000542661 CEP95Q96GE4 821 aa16.77■□□□□ 0.28
DDX11-221ENST00000542661 NBPF3Q9H094 633 aa16.77■□□□□ 0.28
DDX11-221ENST00000542661 VCPKMTQ9H867 229 aa16.77■□□□□ 0.28
DDX11-221ENST00000542661 INCENPQ9NQS7 918 aa16.77■□□□□ 0.28
DDX11-221ENST00000542661 CLIP2Q9UDT6 1046 aa16.77■□□□□ 0.28
DDX11-221ENST00000542661 KIF22Q14807 665 aa16.76■□□□□ 0.27
DDX11-221ENST00000542661 RRP12Q5JTH9 1297 aaKnown RBP16.76■□□□□ 0.27
DDX11-221ENST00000542661 TBC1D10CQ8IV04 446 aa16.76■□□□□ 0.27
DDX11-221ENST00000542661 CNNM2Q9H8M5 875 aa16.76■□□□□ 0.27
DDX11-221ENST00000542661 CPA4Q9UI42 421 aa16.76■□□□□ 0.27
DDX11-221ENST00000542661 WDR46O15213 610 aaKnown RBP16.75■□□□□ 0.27
DDX11-221ENST00000542661 BCRP11274 1271 aa16.75■□□□□ 0.27
DDX11-221ENST00000542661 CATSPERGQ6ZRH7 1159 aa16.75■□□□□ 0.27
DDX11-221ENST00000542661 CTU1Q7Z7A3 348 aaKnown RBP16.75■□□□□ 0.27
DDX11-221ENST00000542661 KRT23Q9C075 422 aa16.75■□□□□ 0.27
DDX11-221ENST00000542661 RPAP3Q9H6T3 665 aaPredicted RBP16.75■□□□□ 0.27
DDX11-221ENST00000542661 TCP11L1Q9NUJ3 509 aa16.75■□□□□ 0.27
DDX11-221ENST00000542661 TACC3Q9Y6A5 838 aa16.75■□□□□ 0.27
DDX11-221ENST00000542661 HERVK_113P62684 666 aa16.74■□□□□ 0.27
DDX11-221ENST00000542661 PKN2Q16513 984 aaKnown RBP16.74■□□□□ 0.27
DDX11-221ENST00000542661 CCDC178Q5BJE1 867 aa16.74■□□□□ 0.27
DDX11-221ENST00000542661 P2RX7Q99572 595 aaKnown RBP16.74■□□□□ 0.27
DDX11-221ENST00000542661 TANGO6Q9C0B7 1094 aa16.74■□□□□ 0.27
DDX11-221ENST00000542661 LSG1Q9H089 658 aaKnown RBP16.74■□□□□ 0.27
DDX11-221ENST00000542661 ANO2Q9NQ90 1003 aa16.74■□□□□ 0.27
DDX11-221ENST00000542661 HOXC10Q9NYD6 342 aa16.74■□□□□ 0.27
DDX11-221ENST00000542661 STX8Q9UNK0 236 aa16.74■□□□□ 0.27
DDX11-221ENST00000542661 MYH4Q9Y623 1939 aa16.74■□□□□ 0.27
DDX11-221ENST00000542661 GNRH1P01148 92 aa16.73■□□□□ 0.27
DDX11-221ENST00000542661 LACTBP83111 547 aaPredicted RBP16.73■□□□□ 0.27
DDX11-221ENST00000542661 TRDNQ13061 729 aa16.73■□□□□ 0.27
DDX11-221ENST00000542661 COG2Q14746 738 aa16.73■□□□□ 0.27
DDX11-221ENST00000542661 FAM110CQ1W6H9 321 aa16.73■□□□□ 0.27
DDX11-221ENST00000542661 IQCA1Q86XH1 822 aa16.73■□□□□ 0.27
DDX11-221ENST00000542661 SPICE1Q8N0Z3 855 aa16.73■□□□□ 0.27
DDX11-221ENST00000542661 GMCL1P1Q8NEA9 526 aa16.73■□□□□ 0.27
DDX11-221ENST00000542661 CD99L2Q8TCZ2 262 aa16.73■□□□□ 0.27
DDX11-221ENST00000542661 TTC14Q96N46 770 aa16.73■□□□□ 0.27
DDX11-221ENST00000542661 IL17RBQ9NRM6 502 aa16.73■□□□□ 0.27
DDX11-221ENST00000542661 RBM8AQ9Y5S9 174 aaKnown RBP16.73■□□□□ 0.27
DDX11-221ENST00000542661 NEDD4P46934 1319 aa16.72■□□□□ 0.27
DDX11-221ENST00000542661 F5H6K3 240 aa16.72■□□□□ 0.27
DDX11-221ENST00000542661 RAD21O60216 631 aa16.72■□□□□ 0.27
DDX11-221ENST00000542661 CYP21A2P08686 494 aa16.72■□□□□ 0.27
DDX11-221ENST00000542661 NOVP48745 357 aa16.72■□□□□ 0.27
DDX11-221ENST00000542661 KLRC3Q07444 240 aa16.72■□□□□ 0.27
DDX11-221ENST00000542661 KIAA1755Q5JYT7 1200 aa16.72■□□□□ 0.27
DDX11-221ENST00000542661 LBX2Q6XYB7 198 aa16.72■□□□□ 0.27
DDX11-221ENST00000542661 ANKRD13CQ8N6S4 541 aa16.72■□□□□ 0.27
DDX11-221ENST00000542661 EFCC1Q9HA90 598 aa16.72■□□□□ 0.27
DDX11-221ENST00000542661 MYPNQ86TC9 1320 aa16.71■□□□□ 0.27
DDX11-221ENST00000542661 NMT2O60551 498 aa16.71■□□□□ 0.27
DDX11-221ENST00000542661 KDM4AO75164 1064 aa16.71■□□□□ 0.27
DDX11-221ENST00000542661 NDUFB10O96000 172 aa16.71■□□□□ 0.27
DDX11-221ENST00000542661 TOP1P11387 765 aaKnown RBP16.71■□□□□ 0.27
DDX11-221ENST00000542661 GPRC5AQ8NFJ5 357 aa16.71■□□□□ 0.27
DDX11-221ENST00000542661 MORF4L1Q9UBU8 362 aa16.71■□□□□ 0.27
DDX11-221ENST00000542661 RABGAP1Q9Y3P9 1069 aa16.71■□□□□ 0.27
DDX11-221ENST00000542661 B4E1Z4 1266 aa16.7■□□□□ 0.26
DDX11-221ENST00000542661 FLOT1O75955 427 aa16.7■□□□□ 0.26
DDX11-221ENST00000542661 FCGRTP55899 365 aa16.7■□□□□ 0.26
DDX11-221ENST00000542661 RNF20Q5VTR2 975 aa16.7■□□□□ 0.26
DDX11-221ENST00000542661 LRRC47Q8N1G4 583 aaKnown RBP16.7■□□□□ 0.26
DDX11-221ENST00000542661 MB21D1Q8N884 522 aa16.7■□□□□ 0.26
DDX11-221ENST00000542661 TRIM17Q9Y577 477 aa16.7■□□□□ 0.26
DDX11-221ENST00000542661 REC8O95072 547 aa16.69■□□□□ 0.26
DDX11-221ENST00000542661 FMNL1O95466 1100 aaPredicted RBP16.69■□□□□ 0.26
DDX11-221ENST00000542661 HOXD10P28358 340 aa16.69■□□□□ 0.26
DDX11-221ENST00000542661 PSMC4P43686 418 aa16.69■□□□□ 0.26
DDX11-221ENST00000542661 FAM83BQ5T0W9 1011 aa16.69■□□□□ 0.26
DDX11-221ENST00000542661 SLFN13Q68D06 897 aa16.69■□□□□ 0.26
DDX11-221ENST00000542661 OTOP1Q7RTM1 612 aa16.69■□□□□ 0.26
DDX11-221ENST00000542661 RALYLQ86SE5 291 aaKnown RBP16.69■□□□□ 0.26
DDX11-221ENST00000542661 DGKHQ86XP1 1220 aa16.69■□□□□ 0.26
DDX11-221ENST00000542661 NCOA7Q8NI08 942 aa16.69■□□□□ 0.26
DDX11-221ENST00000542661 GMCL1Q96IK5 515 aa16.69■□□□□ 0.26
DDX11-221ENST00000542661 UBAC1Q9BSL1 405 aa16.69■□□□□ 0.26
DDX11-221ENST00000542661 ZSWIM5Q9P217 1185 aa16.69■□□□□ 0.26
DDX11-221ENST00000542661 RBPJLQ9UBG7 517 aa16.69■□□□□ 0.26
DDX11-221ENST00000542661 SPDYE16A6NNV3 312 aaPredicted RBP16.68■□□□□ 0.26
DDX11-221ENST00000542661 E7EWF7 191 aa16.68■□□□□ 0.26
DDX11-221ENST00000542661 DSG3P32926 999 aa16.68■□□□□ 0.26
DDX11-221ENST00000542661 PRMT2P55345 433 aa16.68■□□□□ 0.26
DDX11-221ENST00000542661 ERVK-9P63128 1117 aa16.68■□□□□ 0.26
DDX11-221ENST00000542661 ERVK-24P63145 666 aa16.68■□□□□ 0.26
DDX11-221ENST00000542661 CCNA1P78396 465 aa16.68■□□□□ 0.26
DDX11-221ENST00000542661 NECTIN1Q15223 517 aa16.68■□□□□ 0.26
DDX11-221ENST00000542661 TRIM47Q96LD4 638 aa16.68■□□□□ 0.26
DDX11-221ENST00000542661 ZSCAN10Q96SZ4 725 aaPredicted RBP16.68■□□□□ 0.26
DDX11-221ENST00000542661 TMEM47Q9BQJ4 181 aa16.68■□□□□ 0.26
DDX11-221ENST00000542661 PAGR1Q9BTK6 254 aa16.68■□□□□ 0.26
DDX11-221ENST00000542661 FEM1BQ9UK73 627 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms