RNA–Protein interactions for RNA: ENST00000542340.1

CACNA2D4-215, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 3

Gene CACNA2D4, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-215ENST00000542340 NEDD1Q8NHV4 660 aa23.86■■□□□ 1.41
CACNA2D4-215ENST00000542340 ARMC5Q96C12 935 aa23.86■■□□□ 1.41
CACNA2D4-215ENST00000542340 TXNRD2Q9NNW7 524 aa23.86■■□□□ 1.41
CACNA2D4-215ENST00000542340 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.86■■□□□ 1.41
CACNA2D4-215ENST00000542340 MYPNQ86TC9 1320 aa23.85■■□□□ 1.41
CACNA2D4-215ENST00000542340 GREB1LQ9C091 1923 aaPredicted RBP23.85■■□□□ 1.41
CACNA2D4-215ENST00000542340 TNPO2O14787 897 aaKnown RBP23.85■■□□□ 1.41
CACNA2D4-215ENST00000542340 TSPY3P0CV98 308 aa23.85■■□□□ 1.41
CACNA2D4-215ENST00000542340 TSPY8P0CW00 308 aa23.85■■□□□ 1.41
CACNA2D4-215ENST00000542340 COG2Q14746 738 aa23.85■■□□□ 1.41
CACNA2D4-215ENST00000542340 POTEEQ6S8J3 1075 aa23.85■■□□□ 1.41
CACNA2D4-215ENST00000542340 GOPCQ9HD26 462 aa23.85■■□□□ 1.41
CACNA2D4-215ENST00000542340 RABGAP1Q9Y3P9 1069 aa23.85■■□□□ 1.41
CACNA2D4-215ENST00000542340 PLIN4Q96Q06 1357 aa23.84■■□□□ 1.41
CACNA2D4-215ENST00000542340 WDR46O15213 610 aaKnown RBP23.84■■□□□ 1.41
CACNA2D4-215ENST00000542340 FGRP09769 529 aa23.84■■□□□ 1.41
CACNA2D4-215ENST00000542340 TFAP4Q01664 338 aa23.84■■□□□ 1.41
CACNA2D4-215ENST00000542340 SLC9C1Q4G0N8 1177 aa23.84■■□□□ 1.41
CACNA2D4-215ENST00000542340 NBPF11Q86T75 865 aa23.84■■□□□ 1.41
CACNA2D4-215ENST00000542340 SPICE1Q8N0Z3 855 aa23.84■■□□□ 1.41
CACNA2D4-215ENST00000542340 COA7Q96BR5 231 aa23.84■■□□□ 1.41
CACNA2D4-215ENST00000542340 TANGO6Q9C0B7 1094 aa23.84■■□□□ 1.41
CACNA2D4-215ENST00000542340 MTMR4Q9NYA4 1195 aa23.84■■□□□ 1.41
CACNA2D4-215ENST00000542340 HOXC10Q9NYD6 342 aa23.84■■□□□ 1.41
CACNA2D4-215ENST00000542340 SPDYE16A6NNV3 312 aaPredicted RBP23.83■■□□□ 1.41
CACNA2D4-215ENST00000542340 ORC4O43929 436 aa23.83■■□□□ 1.41
CACNA2D4-215ENST00000542340 ERVK-9P63128 1117 aa23.83■■□□□ 1.41
CACNA2D4-215ENST00000542340 ERVK-24P63145 666 aa23.83■■□□□ 1.41
CACNA2D4-215ENST00000542340 PRKCZQ05513 592 aa23.83■■□□□ 1.41
CACNA2D4-215ENST00000542340 FAM47AQ5JRC9 791 aa23.83■■□□□ 1.41
CACNA2D4-215ENST00000542340 RAET1EQ8TD07 263 aa23.83■■□□□ 1.41
CACNA2D4-215ENST00000542340 MKL1Q969V6 931 aa23.83■■□□□ 1.41
CACNA2D4-215ENST00000542340 CEP95Q96GE4 821 aa23.83■■□□□ 1.41
CACNA2D4-215ENST00000542340 CLIP2Q9UDT6 1046 aa23.83■■□□□ 1.41
CACNA2D4-215ENST00000542340 SYNPO2Q9UMS6 1093 aa23.83■■□□□ 1.41
CACNA2D4-215ENST00000542340 MGAMO43451 1857 aa23.82■■□□□ 1.4
CACNA2D4-215ENST00000542340 Q3C1V9 767 aa23.82■■□□□ 1.4
CACNA2D4-215ENST00000542340 PAGR1Q9BTK6 254 aa23.82■■□□□ 1.4
CACNA2D4-215ENST00000542340 DSCC1Q9BVC3 393 aa23.82■■□□□ 1.4
CACNA2D4-215ENST00000542340 INCENPQ9NQS7 918 aa23.82■■□□□ 1.4
CACNA2D4-215ENST00000542340 GABRQQ9UN88 632 aa23.82■■□□□ 1.4
CACNA2D4-215ENST00000542340 TACC3Q9Y6A5 838 aa23.82■■□□□ 1.4
CACNA2D4-215ENST00000542340 PEX10O60683 326 aa23.81■■□□□ 1.4
CACNA2D4-215ENST00000542340 TTLL1O95922 423 aa23.81■■□□□ 1.4
CACNA2D4-215ENST00000542340 NEFLP07196 543 aa23.81■■□□□ 1.4
CACNA2D4-215ENST00000542340 RAD50Q92878 1312 aa23.81■■□□□ 1.4
CACNA2D4-215ENST00000542340 TSPY2A6NKD2 308 aa23.8■■□□□ 1.4
CACNA2D4-215ENST00000542340 F5H6K3 240 aa23.8■■□□□ 1.4
CACNA2D4-215ENST00000542340 CNMDO75829 334 aa23.8■■□□□ 1.4
CACNA2D4-215ENST00000542340 PCP11498 1178 aaKnown RBP23.8■■□□□ 1.4
CACNA2D4-215ENST00000542340 CHMLP26374 656 aa23.8■■□□□ 1.4
CACNA2D4-215ENST00000542340 MAPK4P31152 587 aa23.8■■□□□ 1.4
CACNA2D4-215ENST00000542340 FLT3LGP49771 235 aa23.8■■□□□ 1.4
CACNA2D4-215ENST00000542340 RGS19P49795 217 aa23.8■■□□□ 1.4
CACNA2D4-215ENST00000542340 KLRC3Q07444 240 aa23.8■■□□□ 1.4
CACNA2D4-215ENST00000542340 IRF5Q13568 498 aa23.8■■□□□ 1.4
CACNA2D4-215ENST00000542340 PPP4R3BQ5MIZ7 849 aa23.8■■□□□ 1.4
CACNA2D4-215ENST00000542340 RUFY2Q8WXA3 655 aa23.8■■□□□ 1.4
CACNA2D4-215ENST00000542340 ZNF333Q96JL9 665 aa23.8■■□□□ 1.4
CACNA2D4-215ENST00000542340 CCDC136Q96JN2 1154 aa23.8■■□□□ 1.4
CACNA2D4-215ENST00000542340 RANBP6O60518 1105 aaKnown RBP23.79■■□□□ 1.4
CACNA2D4-215ENST00000542340 FLOT1O75955 427 aa23.79■■□□□ 1.4
CACNA2D4-215ENST00000542340 GRK4P32298 578 aa23.79■■□□□ 1.4
CACNA2D4-215ENST00000542340 DSG3P32926 999 aa23.79■■□□□ 1.4
CACNA2D4-215ENST00000542340 SOX10P56693 466 aa23.79■■□□□ 1.4
CACNA2D4-215ENST00000542340 HAND2P61296 217 aa23.79■■□□□ 1.4
CACNA2D4-215ENST00000542340 CCNA1P78396 465 aa23.79■■□□□ 1.4
CACNA2D4-215ENST00000542340 BTBD7Q9P203 1132 aa23.79■■□□□ 1.4
CACNA2D4-215ENST00000542340 ZNF213O14771 459 aa23.78■■□□□ 1.4
CACNA2D4-215ENST00000542340 RAD21O60216 631 aa23.78■■□□□ 1.4
CACNA2D4-215ENST00000542340 AKNAD1Q5T1N1 836 aa23.78■■□□□ 1.4
CACNA2D4-215ENST00000542340 CCAR1Q8IX12 1150 aaKnown RBP23.78■■□□□ 1.4
CACNA2D4-215ENST00000542340 MB21D1Q8N884 522 aa23.78■■□□□ 1.4
CACNA2D4-215ENST00000542340 SH3TC2Q8TF17 1288 aa23.78■■□□□ 1.4
CACNA2D4-215ENST00000542340 IL25Q9H293 177 aa23.78■■□□□ 1.4
CACNA2D4-215ENST00000542340 CTNNA3Q9UI47 895 aa23.78■■□□□ 1.4
CACNA2D4-215ENST00000542340 NDUFB10O96000 172 aa23.77■■□□□ 1.4
CACNA2D4-215ENST00000542340 MFSD6Q6ZSS7 791 aa23.77■■□□□ 1.4
CACNA2D4-215ENST00000542340 SLAIN1Q8ND83 568 aa23.77■■□□□ 1.4
CACNA2D4-215ENST00000542340 GMCL1P1Q8NEA9 526 aa23.77■■□□□ 1.4
CACNA2D4-215ENST00000542340 PXYLP1Q8TE99 480 aa23.77■■□□□ 1.4
CACNA2D4-215ENST00000542340 STAG1Q8WVM7 1258 aa23.77■■□□□ 1.4
CACNA2D4-215ENST00000542340 NBPF3Q9H094 633 aa23.77■■□□□ 1.4
CACNA2D4-215ENST00000542340 PORCNQ9H237 461 aa23.77■■□□□ 1.4
CACNA2D4-215ENST00000542340 RNF41Q9H4P4 317 aaPredicted RBP23.77■■□□□ 1.4
CACNA2D4-215ENST00000542340 IL17RBQ9NRM6 502 aa23.77■■□□□ 1.4
CACNA2D4-215ENST00000542340 TOMM22Q9NS69 142 aa23.77■■□□□ 1.4
CACNA2D4-215ENST00000542340 GJD2Q9UKL4 321 aa23.77■■□□□ 1.4
CACNA2D4-215ENST00000542340 CENPBP07199 599 aaPredicted RBP23.76■■□□□ 1.39
CACNA2D4-215ENST00000542340 FAM83BQ5T0W9 1011 aa23.76■■□□□ 1.39
CACNA2D4-215ENST00000542340 ADAMTS5Q9UNA0 930 aa23.76■■□□□ 1.39
CACNA2D4-215ENST00000542340 RLFQ13129 1914 aa23.75■■□□□ 1.39
CACNA2D4-215ENST00000542340 ADCY3O60266 1144 aa23.75■■□□□ 1.39
CACNA2D4-215ENST00000542340 NOVP48745 357 aa23.75■■□□□ 1.39
CACNA2D4-215ENST00000542340 NT5C2P49902 561 aa23.75■■□□□ 1.39
CACNA2D4-215ENST00000542340 RRP12Q5JTH9 1297 aaKnown RBP23.75■■□□□ 1.39
CACNA2D4-215ENST00000542340 GPR142Q7Z601 462 aa23.75■■□□□ 1.39
CACNA2D4-215ENST00000542340 TBC1D10CQ8IV04 446 aa23.75■■□□□ 1.39
CACNA2D4-215ENST00000542340 ATG4CQ96DT6 458 aa23.75■■□□□ 1.39
CACNA2D4-215ENST00000542340 STX8Q9UNK0 236 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms