RNA–Protein interactions for RNA: ENST00000542029.1

VTN-203, Transcript of vitronectin, humanhuman

TSL 3

Gene VTN, Length 501 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-203ENST00000542029 PTPREP23469 700 aa13.66□□□□□ -0.22
VTN-203ENST00000542029 SLFNL1Q499Z3 407 aa13.66□□□□□ -0.22
VTN-203ENST00000542029 SBK1Q52WX2 424 aa13.66□□□□□ -0.22
VTN-203ENST00000542029 WDR78Q5VTH9 848 aa13.66□□□□□ -0.22
VTN-203ENST00000542029 MFSD14CQ5VZR4 134 aa13.66□□□□□ -0.22
VTN-203ENST00000542029 CTR9Q6PD62 1173 aa13.66□□□□□ -0.22
VTN-203ENST00000542029 POTEEQ6S8J3 1075 aa13.66□□□□□ -0.22
VTN-203ENST00000542029 SHCBP1Q8NEM2 672 aa13.66□□□□□ -0.22
VTN-203ENST00000542029 TANGO6Q9C0B7 1094 aa13.66□□□□□ -0.22
VTN-203ENST00000542029 NBPF3Q9H094 633 aa13.66□□□□□ -0.22
VTN-203ENST00000542029 ZNF287Q9HBT7 754 aa13.66□□□□□ -0.22
VTN-203ENST00000542029 OGDHLQ9ULD0 1010 aa13.66□□□□□ -0.22
VTN-203ENST00000542029 WDR46O15213 610 aaKnown RBP13.65□□□□□ -0.22
VTN-203ENST00000542029 EVX2Q03828 476 aa13.65□□□□□ -0.22
VTN-203ENST00000542029 PAWRQ96IZ0 340 aaKnown RBP13.65□□□□□ -0.22
VTN-203ENST00000542029 SLC5A4Q9NY91 659 aa13.65□□□□□ -0.22
VTN-203ENST00000542029 BTBD7Q9P203 1132 aa13.65□□□□□ -0.22
VTN-203ENST00000542029 COLQQ9Y215 455 aaPredicted RBP13.65□□□□□ -0.22
VTN-203ENST00000542029 MSCO60682 206 aa13.64□□□□□ -0.23
VTN-203ENST00000542029 FLOT1O75955 427 aa13.64□□□□□ -0.23
VTN-203ENST00000542029 DSG3P32926 999 aa13.64□□□□□ -0.23
VTN-203ENST00000542029 RRP1P56182 461 aaKnown RBP13.64□□□□□ -0.23
VTN-203ENST00000542029 CACNB2Q08289 660 aaPredicted RBP13.64□□□□□ -0.23
VTN-203ENST00000542029 TRIM32Q13049 653 aa13.64□□□□□ -0.23
VTN-203ENST00000542029 GRB14Q14449 540 aa13.64□□□□□ -0.23
VTN-203ENST00000542029 OSBP2Q969R2 916 aa13.64□□□□□ -0.23
VTN-203ENST00000542029 NACAP1Q9BZK3 213 aa13.64□□□□□ -0.23
VTN-203ENST00000542029 SPATC1LQ9H0A9 340 aa13.64□□□□□ -0.23
VTN-203ENST00000542029 MROH8Q9H579 483 aa13.64□□□□□ -0.23
VTN-203ENST00000542029 MKNK2Q9HBH9 465 aa13.64□□□□□ -0.23
VTN-203ENST00000542029 GOPCQ9HD26 462 aa13.64□□□□□ -0.23
VTN-203ENST00000542029 PCDHB15Q9Y5E8 787 aa13.64□□□□□ -0.23
VTN-203ENST00000542029 FOCADQ5VW36 1801 aa13.64□□□□□ -0.23
VTN-203ENST00000542029 CYP2D7A0A087X1C5 515 aa13.63□□□□□ -0.23
VTN-203ENST00000542029 GSG1L2A8MUP6 293 aa13.63□□□□□ -0.23
VTN-203ENST00000542029 GPAA1O43292 621 aa13.63□□□□□ -0.23
VTN-203ENST00000542029 CHGBP05060 677 aa13.63□□□□□ -0.23
VTN-203ENST00000542029 EEF2P13639 858 aaKnown RBP13.63□□□□□ -0.23
VTN-203ENST00000542029 ATP2B2Q01814 1243 aa13.63□□□□□ -0.23
VTN-203ENST00000542029 AAMPQ13685 434 aa13.63□□□□□ -0.23
VTN-203ENST00000542029 SIAH1Q8IUQ4 282 aa13.63□□□□□ -0.23
VTN-203ENST00000542029 ABRAQ8N0Z2 381 aa13.63□□□□□ -0.23
VTN-203ENST00000542029 MOV10L1Q9BXT6 1211 aaKnown RBP13.63□□□□□ -0.23
VTN-203ENST00000542029 CEP290O15078 2479 aa13.63□□□□□ -0.23
VTN-203ENST00000542029 SLC25A27O95847 323 aa13.62□□□□□ -0.23
VTN-203ENST00000542029 APPP05067 770 aa13.62□□□□□ -0.23
VTN-203ENST00000542029 ERCC3P19447 782 aa13.62□□□□□ -0.23
VTN-203ENST00000542029 COPB2P35606 906 aa13.62□□□□□ -0.23
VTN-203ENST00000542029 CCL14Q16627 93 aa13.62□□□□□ -0.23
VTN-203ENST00000542029 CHRDL2Q6WN34 429 aa13.62□□□□□ -0.23
VTN-203ENST00000542029 DPP9Q86TI2 863 aa13.62□□□□□ -0.23
VTN-203ENST00000542029 SPICE1Q8N0Z3 855 aa13.62□□□□□ -0.23
VTN-203ENST00000542029 C11orf49Q9H6J7 331 aa13.62□□□□□ -0.23
VTN-203ENST00000542029 ATAD5Q96QE3 1844 aa13.62□□□□□ -0.23
VTN-203ENST00000542029 MYO5AQ9Y4I1 1855 aaKnown RBP13.61□□□□□ -0.23
VTN-203ENST00000542029 MYH1P12882 1939 aa13.61□□□□□ -0.23
VTN-203ENST00000542029 A0A1W2PPC1 479 aa13.61□□□□□ -0.23
VTN-203ENST00000542029 MINDY4BA8MYZ0 360 aa13.61□□□□□ -0.23
VTN-203ENST00000542029 PATL2C9JE40 543 aaKnown RBP13.61□□□□□ -0.23
VTN-203ENST00000542029 SLC3A2P08195 630 aaKnown RBP13.61□□□□□ -0.23
VTN-203ENST00000542029 MX1P20591 662 aa13.61□□□□□ -0.23
VTN-203ENST00000542029 TDO2P48775 406 aa13.61□□□□□ -0.23
VTN-203ENST00000542029 TSHZ3Q63HK5 1081 aa13.61□□□□□ -0.23
VTN-203ENST00000542029 OLFML2BQ68BL8 750 aa13.61□□□□□ -0.23
VTN-203ENST00000542029 ZNF444Q8N0Y2 327 aaPredicted RBP13.61□□□□□ -0.23
VTN-203ENST00000542029 NYAP2Q9P242 653 aa13.61□□□□□ -0.23
VTN-203ENST00000542029 SYNPO2Q9UMS6 1093 aa13.61□□□□□ -0.23
VTN-203ENST00000542029 DOCK3Q8IZD9 2030 aa13.61□□□□□ -0.23
VTN-203ENST00000542029 ROBO3Q96MS0 1386 aa13.6□□□□□ -0.23
VTN-203ENST00000542029 MGAMO43451 1857 aa13.6□□□□□ -0.23
VTN-203ENST00000542029 RASA1P20936 1047 aa13.6□□□□□ -0.23
VTN-203ENST00000542029 ADORA2AP29274 412 aa13.6□□□□□ -0.23
VTN-203ENST00000542029 FXR1P51114 621 aaKnown RBP eCLIP13.6□□□□□ -0.23
VTN-203ENST00000542029 PLS1Q14651 629 aa13.6□□□□□ -0.23
VTN-203ENST00000542029 KIAA1755Q5JYT7 1200 aa13.6□□□□□ -0.23
VTN-203ENST00000542029 PPP4R3BQ5MIZ7 849 aa13.6□□□□□ -0.23
VTN-203ENST00000542029 NCAPG2Q86XI2 1143 aa13.6□□□□□ -0.23
VTN-203ENST00000542029 TICAM2Q86XR7 235 aa13.6□□□□□ -0.23
VTN-203ENST00000542029 CLEC10AQ8IUN9 316 aa13.6□□□□□ -0.23
VTN-203ENST00000542029 PI4K2BQ8TCG2 481 aa13.6□□□□□ -0.23
VTN-203ENST00000542029 DIS3LQ8TF46 1054 aaKnown RBP13.6□□□□□ -0.23
VTN-203ENST00000542029 ATG4CQ96DT6 458 aa13.6□□□□□ -0.23
VTN-203ENST00000542029 FSD1Q9BTV5 496 aa13.6□□□□□ -0.23
VTN-203ENST00000542029 ADAMTS5Q9UNA0 930 aa13.6□□□□□ -0.23
VTN-203ENST00000542029 CDK5RAP2Q96SN8 1893 aa13.59□□□□□ -0.23
VTN-203ENST00000542029 SMIM22K7EJ46 135 aa13.59□□□□□ -0.23
VTN-203ENST00000542029 FCER1AP12319 257 aa13.59□□□□□ -0.23
VTN-203ENST00000542029 CCND3P30281 292 aaPredicted RBP13.59□□□□□ -0.23
VTN-203ENST00000542029 MNX1P50219 401 aaPredicted RBP13.59□□□□□ -0.23
VTN-203ENST00000542029 PDE4BQ07343 736 aa13.59□□□□□ -0.23
VTN-203ENST00000542029 HDAC1Q13547 482 aaPredicted RBP13.59□□□□□ -0.23
VTN-203ENST00000542029 ZMYM1Q5SVZ6 1142 aa13.59□□□□□ -0.23
VTN-203ENST00000542029 LHX8Q68G74 356 aa13.59□□□□□ -0.23
VTN-203ENST00000542029 RIOX2Q8IUF8 465 aa13.59□□□□□ -0.23
VTN-203ENST00000542029 IFNL3Q8IZI9 196 aa13.59□□□□□ -0.23
VTN-203ENST00000542029 NPLOC4Q8TAT6 608 aa13.59□□□□□ -0.23
VTN-203ENST00000542029 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.59□□□□□ -0.23
VTN-203ENST00000542029 DDX20Q9UHI6 824 aaKnown RBP13.59□□□□□ -0.23
VTN-203ENST00000542029 PPP1R9AQ9ULJ8 1098 aa13.59□□□□□ -0.23
VTN-203ENST00000542029 DDX60LQ5H9U9 1706 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms