RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 SNX21Q969T3 373 aa16.87■□□□□ 0.29
HMGA2-210ENST00000541363 YARSP54577 528 aaKnown RBP16.87■□□□□ 0.29
HMGA2-210ENST00000541363 DHX32Q7L7V1 743 aaKnown RBP16.87■□□□□ 0.29
HMGA2-210ENST00000541363 KIFC3Q9BVG8 833 aa16.87■□□□□ 0.29
HMGA2-210ENST00000541363 GTPBP10A4D1E9 387 aaKnown RBP16.87■□□□□ 0.29
HMGA2-210ENST00000541363 MAFGO15525 162 aa16.87■□□□□ 0.29
HMGA2-210ENST00000541363 DAAM1Q9Y4D1 1078 aa16.87■□□□□ 0.29
HMGA2-210ENST00000541363 EXOC3O60645 756 aa16.86■□□□□ 0.29
HMGA2-210ENST00000541363 SCYL2Q6P3W7 929 aa16.86■□□□□ 0.29
HMGA2-210ENST00000541363 RNF217Q8TC41 542 aa16.86■□□□□ 0.29
HMGA2-210ENST00000541363 EYA3Q99504 573 aa16.86■□□□□ 0.29
HMGA2-210ENST00000541363 IFIH1Q9BYX4 1025 aaKnown RBP16.86■□□□□ 0.29
HMGA2-210ENST00000541363 PPP1R12AO14974 1030 aaPredicted RBP16.86■□□□□ 0.29
HMGA2-210ENST00000541363 TNNI1P19237 187 aa16.86■□□□□ 0.29
HMGA2-210ENST00000541363 FBXO41Q8TF61 875 aa16.86■□□□□ 0.29
HMGA2-210ENST00000541363 FANCCQ00597 558 aa16.86■□□□□ 0.29
HMGA2-210ENST00000541363 CREB3L3Q68CJ9 461 aa16.86■□□□□ 0.29
HMGA2-210ENST00000541363 FRMD3A2A2Y4 597 aa16.86■□□□□ 0.29
HMGA2-210ENST00000541363 TRIM42Q8IWZ5 723 aa16.86■□□□□ 0.29
HMGA2-210ENST00000541363 CAPS2Q9BXY5 557 aa16.86■□□□□ 0.29
HMGA2-210ENST00000541363 MAPK8IP1Q9UQF2 711 aa16.86■□□□□ 0.29
HMGA2-210ENST00000541363 POLR2BP30876 1174 aaKnown RBP16.86■□□□□ 0.29
HMGA2-210ENST00000541363 SNX1Q13596 522 aa16.86■□□□□ 0.29
HMGA2-210ENST00000541363 MIGA1Q8NAN2 632 aa16.86■□□□□ 0.29
HMGA2-210ENST00000541363 ANKRD2Q9GZV1 360 aa16.86■□□□□ 0.29
HMGA2-210ENST00000541363 IFNB1P01574 187 aa16.86■□□□□ 0.29
HMGA2-210ENST00000541363 GRM8O00222 908 aa16.86■□□□□ 0.29
HMGA2-210ENST00000541363 KRIT1O00522 736 aa16.86■□□□□ 0.29
HMGA2-210ENST00000541363 SRGAP2BP0DMP2 458 aa16.86■□□□□ 0.29
HMGA2-210ENST00000541363 SMC5Q8IY18 1101 aa16.86■□□□□ 0.29
HMGA2-210ENST00000541363 TRIM55Q9BYV6 548 aa16.86■□□□□ 0.29
HMGA2-210ENST00000541363 MIS12Q9H081 205 aa16.86■□□□□ 0.29
HMGA2-210ENST00000541363 DEXIO95424 95 aa16.85■□□□□ 0.29
HMGA2-210ENST00000541363 TTC6Q86TZ1 520 aa16.85■□□□□ 0.29
HMGA2-210ENST00000541363 SMYD2Q9NRG4 433 aa16.85■□□□□ 0.29
HMGA2-210ENST00000541363 AK2P54819 239 aa16.85■□□□□ 0.29
HMGA2-210ENST00000541363 RNASELQ05823 741 aaKnown RBP16.85■□□□□ 0.29
HMGA2-210ENST00000541363 DDX39AO00148 427 aaKnown RBP16.85■□□□□ 0.29
HMGA2-210ENST00000541363 SUN1O94901 812 aa16.85■□□□□ 0.29
HMGA2-210ENST00000541363 RTEL1Q9NZ71 1219 aa16.85■□□□□ 0.29
HMGA2-210ENST00000541363 HEXIM1O94992 359 aaKnown RBP16.85■□□□□ 0.29
HMGA2-210ENST00000541363 KRT10P13645 584 aa16.85■□□□□ 0.29
HMGA2-210ENST00000541363 TBCCQ15814 346 aa16.85■□□□□ 0.29
HMGA2-210ENST00000541363 CALCRLQ16602 461 aa16.85■□□□□ 0.29
HMGA2-210ENST00000541363 BBOF1Q8ND07 529 aa16.85■□□□□ 0.29
HMGA2-210ENST00000541363 FBXL13Q8NEE6 735 aa16.85■□□□□ 0.29
HMGA2-210ENST00000541363 ATP6V1E2Q96A05 226 aa16.85■□□□□ 0.29
HMGA2-210ENST00000541363 ST7Q9NRC1 585 aa16.85■□□□□ 0.29
HMGA2-210ENST00000541363 KCNH3Q9ULD8 1083 aa16.85■□□□□ 0.29
HMGA2-210ENST00000541363 GNL1P36915 607 aaPredicted RBP16.85■□□□□ 0.29
HMGA2-210ENST00000541363 TTC1Q99614 292 aa16.85■□□□□ 0.29
HMGA2-210ENST00000541363 HELLSQ9NRZ9 838 aa16.85■□□□□ 0.29
HMGA2-210ENST00000541363 SCOCQ9UIL1 159 aa16.85■□□□□ 0.29
HMGA2-210ENST00000541363 VGLL3A8MV65 326 aa16.85■□□□□ 0.29
HMGA2-210ENST00000541363 EFCAB14O75071 495 aa16.85■□□□□ 0.29
HMGA2-210ENST00000541363 RXRAP19793 462 aa16.85■□□□□ 0.29
HMGA2-210ENST00000541363 OTUD6AQ7L8S5 288 aa16.85■□□□□ 0.29
HMGA2-210ENST00000541363 CENPKQ9BS16 269 aa16.85■□□□□ 0.29
HMGA2-210ENST00000541363 TXLNGQ9NUQ3 528 aa16.85■□□□□ 0.29
HMGA2-210ENST00000541363 ZRANB2O95218 330 aaKnown RBP eCLIP16.84■□□□□ 0.29
HMGA2-210ENST00000541363 RUNDC3BQ96NL0 473 aa16.84■□□□□ 0.29
HMGA2-210ENST00000541363 SAR1BQ9Y6B6 198 aa16.84■□□□□ 0.29
HMGA2-210ENST00000541363 TTC41PQ6P2S7 1318 aa16.84■□□□□ 0.29
HMGA2-210ENST00000541363 MLKLQ8NB16 471 aa16.84■□□□□ 0.29
HMGA2-210ENST00000541363 ZC3H15Q8WU90 426 aaKnown RBP16.84■□□□□ 0.29
HMGA2-210ENST00000541363 TRIM15Q9C019 465 aa16.84■□□□□ 0.29
HMGA2-210ENST00000541363 AFAP1Q8N556 730 aa16.84■□□□□ 0.29
HMGA2-210ENST00000541363 NELFBQ8WX92 580 aa16.84■□□□□ 0.29
HMGA2-210ENST00000541363 ATF2P15336 505 aa16.84■□□□□ 0.29
HMGA2-210ENST00000541363 ATF7P17544 494 aaPredicted RBP16.84■□□□□ 0.29
HMGA2-210ENST00000541363 KCNA4P22459 653 aa16.84■□□□□ 0.29
HMGA2-210ENST00000541363 PDE1AP54750 535 aa16.84■□□□□ 0.29
HMGA2-210ENST00000541363 FBXW4P57775 412 aa16.84■□□□□ 0.29
HMGA2-210ENST00000541363 RCN2Q14257 317 aa16.84■□□□□ 0.29
HMGA2-210ENST00000541363 BRD3Q15059 726 aa16.84■□□□□ 0.29
HMGA2-210ENST00000541363 LONRF3Q496Y0 759 aa16.84■□□□□ 0.29
HMGA2-210ENST00000541363 EHBP1L1Q8N3D4 1523 aa16.84■□□□□ 0.29
HMGA2-210ENST00000541363 TYW5A2RUC4 315 aaKnown RBP16.84■□□□□ 0.29
HMGA2-210ENST00000541363 FLOT2Q14254 428 aa16.84■□□□□ 0.29
HMGA2-210ENST00000541363 CCDC84Q86UT8 332 aaPredicted RBP16.84■□□□□ 0.29
HMGA2-210ENST00000541363 TRPA1O75762 1119 aa16.84■□□□□ 0.29
HMGA2-210ENST00000541363 TYW1BQ6NUM6 668 aa16.84■□□□□ 0.29
HMGA2-210ENST00000541363 TRIM58Q8NG06 486 aa16.84■□□□□ 0.29
HMGA2-210ENST00000541363 MED4Q9NPJ6 270 aa16.84■□□□□ 0.29
HMGA2-210ENST00000541363 TBC1D7Q9P0N9 293 aa16.84■□□□□ 0.29
HMGA2-210ENST00000541363 NIP7Q9Y221 180 aaKnown RBP eCLIP16.84■□□□□ 0.29
HMGA2-210ENST00000541363 SLC12A1Q13621 1099 aa16.83■□□□□ 0.29
HMGA2-210ENST00000541363 PIK3AP1Q6ZUJ8 805 aa16.83■□□□□ 0.29
HMGA2-210ENST00000541363 NME8Q8N427 588 aa16.83■□□□□ 0.29
HMGA2-210ENST00000541363 PIP4K2CQ8TBX8 421 aa16.83■□□□□ 0.29
HMGA2-210ENST00000541363 PARP3Q9Y6F1 533 aa16.83■□□□□ 0.29
HMGA2-210ENST00000541363 XPAP23025 273 aaPredicted RBP16.83■□□□□ 0.29
HMGA2-210ENST00000541363 IL9RQ01113 521 aa16.83■□□□□ 0.29
HMGA2-210ENST00000541363 ARHGAP44Q17R89 818 aa16.83■□□□□ 0.29
HMGA2-210ENST00000541363 TPCN1Q9ULQ1 816 aa16.83■□□□□ 0.29
HMGA2-210ENST00000541363 TXKP42681 527 aa16.83■□□□□ 0.29
HMGA2-210ENST00000541363 KRT80Q6KB66 452 aa16.83■□□□□ 0.29
HMGA2-210ENST00000541363 SAP30BPQ9UHR5 308 aaKnown RBP16.83■□□□□ 0.29
HMGA2-210ENST00000541363 INHBAP08476 426 aa16.83■□□□□ 0.28
HMGA2-210ENST00000541363 FANCD2Q9BXW9 1451 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms