RNA–Protein interactions for RNA: ENST00000541272.1

UBC-209, Transcript of ubiquitin C, humanhuman

TSL 5

Gene UBC, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-209ENST00000541272 ADGRA1Q86SQ6 560 aa14.3□□□□□ -0.12
UBC-209ENST00000541272 MOV10L1Q9BXT6 1211 aaKnown RBP14.3□□□□□ -0.12
UBC-209ENST00000541272 RPAP3Q9H6T3 665 aaPredicted RBP14.3□□□□□ -0.12
UBC-209ENST00000541272 SH2D4AQ9H788 454 aa14.3□□□□□ -0.12
UBC-209ENST00000541272 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.3□□□□□ -0.12
UBC-209ENST00000541272 CLTBP09497 229 aa14.29□□□□□ -0.12
UBC-209ENST00000541272 CYP7A1P22680 504 aa14.29□□□□□ -0.12
UBC-209ENST00000541272 GABPAQ06546 454 aa14.29□□□□□ -0.12
UBC-209ENST00000541272 MAP3K12Q12852 859 aa14.29□□□□□ -0.12
UBC-209ENST00000541272 POLA2Q14181 598 aa14.29□□□□□ -0.12
UBC-209ENST00000541272 TRIM60Q495X7 471 aa14.29□□□□□ -0.12
UBC-209ENST00000541272 AKNAD1Q5T1N1 836 aa14.29□□□□□ -0.12
UBC-209ENST00000541272 SSH3Q8TE77 659 aa14.29□□□□□ -0.12
UBC-209ENST00000541272 MYLIPQ8WY64 445 aa14.29□□□□□ -0.12
UBC-209ENST00000541272 NOP58Q9Y2X3 529 aaKnown RBP14.29□□□□□ -0.12
UBC-209ENST00000541272 TRIM43BA6NCK2 446 aa14.28□□□□□ -0.12
UBC-209ENST00000541272 RARBP10826 455 aa14.28□□□□□ -0.12
UBC-209ENST00000541272 FCER1AP12319 257 aa14.28□□□□□ -0.12
UBC-209ENST00000541272 ERCC3P19447 782 aa14.28□□□□□ -0.12
UBC-209ENST00000541272 MROH7Q68CQ1 1323 aa14.28□□□□□ -0.12
UBC-209ENST00000541272 NUP133Q8WUM0 1156 aa14.28□□□□□ -0.12
UBC-209ENST00000541272 TRIM43Q96BQ3 446 aaPredicted RBP14.28□□□□□ -0.12
UBC-209ENST00000541272 MAML3Q96JK9 1138 aa14.28□□□□□ -0.12
UBC-209ENST00000541272 RNPC3Q96LT9 517 aaKnown RBP14.28□□□□□ -0.12
UBC-209ENST00000541272 PRDM5Q9NQX1 630 aaPredicted RBP14.28□□□□□ -0.12
UBC-209ENST00000541272 SWAP70Q9UH65 585 aa14.28□□□□□ -0.12
UBC-209ENST00000541272 ADAMTS5Q9UNA0 930 aa14.28□□□□□ -0.12
UBC-209ENST00000541272 ARIH1Q9Y4X5 557 aaPredicted RBP14.28□□□□□ -0.12
UBC-209ENST00000541272 PNMA6EA0A0J9YXQ4 647 aa14.27□□□□□ -0.13
UBC-209ENST00000541272 MOXD2PA6NHM9 499 aa14.27□□□□□ -0.13
UBC-209ENST00000541272 RAG1P15918 1043 aa14.27□□□□□ -0.13
UBC-209ENST00000541272 DSG3P32926 999 aa14.27□□□□□ -0.13
UBC-209ENST00000541272 SHMT1P34896 483 aa14.27□□□□□ -0.13
UBC-209ENST00000541272 ADCYAP1R1P41586 468 aa14.27□□□□□ -0.13
UBC-209ENST00000541272 ZAP70P43403 619 aa14.27□□□□□ -0.13
UBC-209ENST00000541272 TLE2Q04725 743 aa14.27□□□□□ -0.13
UBC-209ENST00000541272 FPGSQ05932 587 aa14.27□□□□□ -0.13
UBC-209ENST00000541272 TTF1Q15361 905 aaPredicted RBP14.27□□□□□ -0.13
UBC-209ENST00000541272 TMEM179Q6ZVK1 233 aa14.27□□□□□ -0.13
UBC-209ENST00000541272 DBNDD2Q9BQY9 259 aa14.27□□□□□ -0.13
UBC-209ENST00000541272 SAP30BPQ9UHR5 308 aaKnown RBP14.27□□□□□ -0.13
UBC-209ENST00000541272 A0A0G2JMZ2 1700 aa14.27□□□□□ -0.13
UBC-209ENST00000541272 COBLO75128 1261 aa14.26□□□□□ -0.13
UBC-209ENST00000541272 GUCY1A2P33402 732 aa14.26□□□□□ -0.13
UBC-209ENST00000541272 ATP8B2P98198 1209 aa14.26□□□□□ -0.13
UBC-209ENST00000541272 SHROOM1Q2M3G4 852 aaPredicted RBP14.26□□□□□ -0.13
UBC-209ENST00000541272 ACER1Q8TDN7 264 aa14.26□□□□□ -0.13
UBC-209ENST00000541272 CCDC17Q96LX7 622 aa14.26□□□□□ -0.13
UBC-209ENST00000541272 SEZ6LQ9BYH1 1024 aa14.26□□□□□ -0.13
UBC-209ENST00000541272 XPNPEP3Q9NQH7 507 aa14.26□□□□□ -0.13
UBC-209ENST00000541272 TMX2Q9Y320 296 aa14.26□□□□□ -0.13
UBC-209ENST00000541272 PRUNE2Q8WUY3 3088 aa14.26□□□□□ -0.13
UBC-209ENST00000541272 MYH1P12882 1939 aa14.25□□□□□ -0.13
UBC-209ENST00000541272 ELP1O95163 1332 aa14.25□□□□□ -0.13
UBC-209ENST00000541272 DCDC2CA8MYV0 355 aa14.25□□□□□ -0.13
UBC-209ENST00000541272 WDR46O15213 610 aaKnown RBP14.25□□□□□ -0.13
UBC-209ENST00000541272 AKR1A1P14550 325 aa14.25□□□□□ -0.13
UBC-209ENST00000541272 DNAJB2P25686 324 aa14.25□□□□□ -0.13
UBC-209ENST00000541272 ZYXQ15942 572 aaKnown RBP14.25□□□□□ -0.13
UBC-209ENST00000541272 RIOK1Q9BRS2 568 aaKnown RBP14.25□□□□□ -0.13
UBC-209ENST00000541272 TINF2Q9BSI4 451 aa14.25□□□□□ -0.13
UBC-209ENST00000541272 ZNF576Q9H609 170 aa14.25□□□□□ -0.13
UBC-209ENST00000541272 ARHGEF10LQ9HCE6 1279 aa14.25□□□□□ -0.13
UBC-209ENST00000541272 PIH1D3Q9NQM4 214 aaKnown RBP14.25□□□□□ -0.13
UBC-209ENST00000541272 SNRKQ9NRH2 765 aa14.25□□□□□ -0.13
UBC-209ENST00000541272 NDUFB9Q9Y6M9 179 aa14.25□□□□□ -0.13
UBC-209ENST00000541272 IDH1O75874 414 aaKnown RBP14.24□□□□□ -0.13
UBC-209ENST00000541272 TIMP1P01033 207 aa14.24□□□□□ -0.13
UBC-209ENST00000541272 POLR3DP05423 398 aaPredicted RBP14.24□□□□□ -0.13
UBC-209ENST00000541272 PLCD1P51178 756 aa14.24□□□□□ -0.13
UBC-209ENST00000541272 DYNLL1P63167 89 aaKnown RBP14.24□□□□□ -0.13
UBC-209ENST00000541272 PPIGQ13427 754 aaKnown RBP eCLIP14.24□□□□□ -0.13
UBC-209ENST00000541272 SH3RF1Q7Z6J0 888 aa14.24□□□□□ -0.13
UBC-209ENST00000541272 RIOX2Q8IUF8 465 aa14.24□□□□□ -0.13
UBC-209ENST00000541272 CDCA7LQ96GN5 454 aa14.24□□□□□ -0.13
UBC-209ENST00000541272 CRNKL1Q9BZJ0 848 aaKnown RBP14.24□□□□□ -0.13
UBC-209ENST00000541272 TANGO6Q9C0B7 1094 aa14.24□□□□□ -0.13
UBC-209ENST00000541272 ZNF316A6NFI3 1004 aaPredicted RBP14.23□□□□□ -0.13
UBC-209ENST00000541272 TRIM27P14373 513 aa14.23□□□□□ -0.13
UBC-209ENST00000541272 COL9A1P20849 921 aa14.23□□□□□ -0.13
UBC-209ENST00000541272 CST5P28325 142 aaPredicted RBP14.23□□□□□ -0.13
UBC-209ENST00000541272 SEPT2Q15019 361 aa14.23□□□□□ -0.13
UBC-209ENST00000541272 FAM47AQ5JRC9 791 aa14.23□□□□□ -0.13
UBC-209ENST00000541272 RASIP1Q5U651 963 aa14.23□□□□□ -0.13
UBC-209ENST00000541272 MFSD5Q6N075 450 aa14.23□□□□□ -0.13
UBC-209ENST00000541272 ZNF467Q7Z7K2 595 aaPredicted RBP14.23□□□□□ -0.13
UBC-209ENST00000541272 NCAPG2Q86XI2 1143 aa14.23□□□□□ -0.13
UBC-209ENST00000541272 MAGEB6Q8N7X4 407 aa14.23□□□□□ -0.13
UBC-209ENST00000541272 SLC44A5Q8NCS7 719 aa14.23□□□□□ -0.13
UBC-209ENST00000541272 TIFAQ96CG3 184 aa14.23□□□□□ -0.13
UBC-209ENST00000541272 GAS2L1Q99501 681 aaPredicted RBP14.23□□□□□ -0.13
UBC-209ENST00000541272 TMEM39AQ9NV64 488 aa14.23□□□□□ -0.13
UBC-209ENST00000541272 DBNLQ9UJU6 430 aaKnown RBP14.23□□□□□ -0.13
UBC-209ENST00000541272 SYNGAP1Q96PV0 1343 aa14.22□□□□□ -0.13
UBC-209ENST00000541272 A0A1W2PQ45 241 aaPredicted RBP14.22□□□□□ -0.13
UBC-209ENST00000541272 A0A1W2PQY0 241 aa14.22□□□□□ -0.13
UBC-209ENST00000541272 A0A1W2PRG0 241 aa14.22□□□□□ -0.13
UBC-209ENST00000541272 FLOT1O75955 427 aa14.22□□□□□ -0.13
UBC-209ENST00000541272 NKX3-2P78367 333 aa14.22□□□□□ -0.13
UBC-209ENST00000541272 FAAP100Q0VG06 881 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms