RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 ZMYM6O95789 1325 aa16.54■□□□□ 0.24
SMARCA4-207ENST00000541122 BCRP11274 1271 aa16.54■□□□□ 0.24
SMARCA4-207ENST00000541122 ICE2Q659A1 982 aa16.54■□□□□ 0.24
SMARCA4-207ENST00000541122 MMS22LQ6ZRQ5 1243 aa16.54■□□□□ 0.24
SMARCA4-207ENST00000541122 FAM207AQ9NSI2 230 aaPredicted RBP16.54■□□□□ 0.24
SMARCA4-207ENST00000541122 IQSEC3Q9UPP2 1182 aaPredicted RBP16.54■□□□□ 0.24
SMARCA4-207ENST00000541122 SUN1O94901 812 aa16.54■□□□□ 0.24
SMARCA4-207ENST00000541122 CD2BP2O95400 341 aaKnown RBP16.54■□□□□ 0.24
SMARCA4-207ENST00000541122 XAGE2Q96GT9 111 aa16.54■□□□□ 0.24
SMARCA4-207ENST00000541122 YTHDC2Q9H6S0 1430 aaKnown RBP16.54■□□□□ 0.24
SMARCA4-207ENST00000541122 CCNT1O60563 726 aaKnown RBP16.53■□□□□ 0.24
SMARCA4-207ENST00000541122 SUCLG2Q96I99 432 aa16.53■□□□□ 0.24
SMARCA4-207ENST00000541122 TRIM4Q9C037 500 aa16.53■□□□□ 0.24
SMARCA4-207ENST00000541122 POLR3EQ9NVU0 708 aa16.53■□□□□ 0.24
SMARCA4-207ENST00000541122 AGTPBP1Q9UPW5 1226 aa16.53■□□□□ 0.24
SMARCA4-207ENST00000541122 Q9H521 79 aa16.53■□□□□ 0.24
SMARCA4-207ENST00000541122 CLTAP09496 248 aa16.53■□□□□ 0.24
SMARCA4-207ENST00000541122 PUM3Q15397 648 aaKnown RBP16.53■□□□□ 0.24
SMARCA4-207ENST00000541122 ALS2CLQ60I27 953 aa16.53■□□□□ 0.24
SMARCA4-207ENST00000541122 AFAP1L2Q8N4X5 818 aa16.53■□□□□ 0.24
SMARCA4-207ENST00000541122 GRK7Q8WTQ7 553 aa16.53■□□□□ 0.24
SMARCA4-207ENST00000541122 RUNDC3BQ96NL0 473 aa16.53■□□□□ 0.24
SMARCA4-207ENST00000541122 KCNK3O14649 394 aa16.53■□□□□ 0.24
SMARCA4-207ENST00000541122 RETREG2Q8NC44 543 aa16.53■□□□□ 0.24
SMARCA4-207ENST00000541122 SMC1BQ8NDV3 1235 aa16.53■□□□□ 0.24
SMARCA4-207ENST00000541122 UHRF1BP1LA0JNW5 1464 aa16.53■□□□□ 0.24
SMARCA4-207ENST00000541122 MAP3K19Q56UN5 1328 aa16.53■□□□□ 0.24
SMARCA4-207ENST00000541122 MYO1CO00159 1063 aa16.52■□□□□ 0.24
SMARCA4-207ENST00000541122 HOXC9P31274 260 aa16.52■□□□□ 0.24
SMARCA4-207ENST00000541122 TRMT1LQ7Z2T5 733 aaKnown RBP16.52■□□□□ 0.24
SMARCA4-207ENST00000541122 ERBB4Q15303 1308 aa16.52■□□□□ 0.24
SMARCA4-207ENST00000541122 SNX29Q8TEQ0 813 aa16.52■□□□□ 0.24
SMARCA4-207ENST00000541122 GSDMAQ96QA5 445 aa16.52■□□□□ 0.24
SMARCA4-207ENST00000541122 ANKRD2Q9GZV1 360 aa16.52■□□□□ 0.24
SMARCA4-207ENST00000541122 ADCY9O60503 1353 aa16.52■□□□□ 0.24
SMARCA4-207ENST00000541122 ITIH3Q06033 890 aa16.52■□□□□ 0.23
SMARCA4-207ENST00000541122 SEPT14Q6ZU15 432 aa16.52■□□□□ 0.23
SMARCA4-207ENST00000541122 MAP4K1Q92918 833 aa16.52■□□□□ 0.23
SMARCA4-207ENST00000541122 BLZF1Q9H2G9 400 aa16.52■□□□□ 0.23
SMARCA4-207ENST00000541122 RCOR1Q9UKL0 485 aa16.52■□□□□ 0.23
SMARCA4-207ENST00000541122 ARHGEF10O15013 1369 aa16.52■□□□□ 0.23
SMARCA4-207ENST00000541122 COPB1P53618 953 aaKnown RBP16.52■□□□□ 0.23
SMARCA4-207ENST00000541122 IFT88Q13099 833 aa16.52■□□□□ 0.23
SMARCA4-207ENST00000541122 C11orf57Q6ZUT1 292 aaPredicted RBP16.52■□□□□ 0.23
SMARCA4-207ENST00000541122 ANKRD42Q8N9B4 389 aa16.52■□□□□ 0.23
SMARCA4-207ENST00000541122 TYW1Q9NV66 732 aaKnown RBP16.52■□□□□ 0.23
SMARCA4-207ENST00000541122 KCNJ14Q9UNX9 436 aa16.52■□□□□ 0.23
SMARCA4-207ENST00000541122 TXNDC9O14530 226 aa16.51■□□□□ 0.23
SMARCA4-207ENST00000541122 SLC39A14Q15043 492 aa16.51■□□□□ 0.23
SMARCA4-207ENST00000541122 CLEC17AQ6ZS10 378 aa16.51■□□□□ 0.23
SMARCA4-207ENST00000541122 CNOT10Q9H9A5 744 aaKnown RBP16.51■□□□□ 0.23
SMARCA4-207ENST00000541122 EXOC7Q9UPT5 735 aa16.51■□□□□ 0.23
SMARCA4-207ENST00000541122 KRT5P13647 590 aa16.51■□□□□ 0.23
SMARCA4-207ENST00000541122 TRIM68Q6AZZ1 485 aa16.51■□□□□ 0.23
SMARCA4-207ENST00000541122 CERS3Q8IU89 383 aa16.51■□□□□ 0.23
SMARCA4-207ENST00000541122 FNBP4Q8N3X1 1017 aaPredicted RBP16.51■□□□□ 0.23
SMARCA4-207ENST00000541122 NLRP3Q96P20 1036 aa16.51■□□□□ 0.23
SMARCA4-207ENST00000541122 MAGEF1Q9HAY2 307 aa16.51■□□□□ 0.23
SMARCA4-207ENST00000541122 TXKP42681 527 aa16.51■□□□□ 0.23
SMARCA4-207ENST00000541122 ST5P78524 1137 aa16.51■□□□□ 0.23
SMARCA4-207ENST00000541122 HERC4Q5GLZ8 1057 aaPredicted RBP16.51■□□□□ 0.23
SMARCA4-207ENST00000541122 TNRQ92752 1358 aa16.51■□□□□ 0.23
SMARCA4-207ENST00000541122 ZNF518AQ6AHZ1 1483 aa16.51■□□□□ 0.23
SMARCA4-207ENST00000541122 A0A0D9SFI3 127 aa16.51■□□□□ 0.23
SMARCA4-207ENST00000541122 HGSO14964 777 aaPredicted RBP16.51■□□□□ 0.23
SMARCA4-207ENST00000541122 VSTM4Q8IW00 320 aa16.51■□□□□ 0.23
SMARCA4-207ENST00000541122 NT5C3AQ9H0P0 336 aa16.51■□□□□ 0.23
SMARCA4-207ENST00000541122 RNASELQ05823 741 aaKnown RBP16.5■□□□□ 0.23
SMARCA4-207ENST00000541122 SLMAPQ14BN4 828 aa16.5■□□□□ 0.23
SMARCA4-207ENST00000541122 NBPF5PQ86XG9 351 aaPredicted RBP16.5■□□□□ 0.23
SMARCA4-207ENST00000541122 LSM14BQ9BX40 385 aaKnown RBP16.5■□□□□ 0.23
SMARCA4-207ENST00000541122 ARMT1Q9H993 441 aa16.5■□□□□ 0.23
SMARCA4-207ENST00000541122 NFATC2IPQ8NCF5 419 aa16.5■□□□□ 0.23
SMARCA4-207ENST00000541122 BBOF1Q8ND07 529 aa16.5■□□□□ 0.23
SMARCA4-207ENST00000541122 IP6K1Q92551 441 aa16.5■□□□□ 0.23
SMARCA4-207ENST00000541122 CASP8Q14790 479 aa16.5■□□□□ 0.23
SMARCA4-207ENST00000541122 HSP90AA5PQ58FG0 334 aa16.5■□□□□ 0.23
SMARCA4-207ENST00000541122 ZNF622Q969S3 477 aaKnown RBP eCLIP16.5■□□□□ 0.232e-8■■□□□ 13.1
SMARCA4-207ENST00000541122 PANX2Q96RD6 677 aa16.5■□□□□ 0.23
SMARCA4-207ENST00000541122 EEF1GP26641 437 aaKnown RBP16.5■□□□□ 0.23
SMARCA4-207ENST00000541122 GCKRQ14397 625 aa16.5■□□□□ 0.23
SMARCA4-207ENST00000541122 MGARPQ8TDB4 240 aa16.5■□□□□ 0.23
SMARCA4-207ENST00000541122 MORC2Q9Y6X9 1032 aaPredicted RBP16.5■□□□□ 0.23
SMARCA4-207ENST00000541122 SYNMO15061 1565 aa16.5■□□□□ 0.23
SMARCA4-207ENST00000541122 CASP14P31944 242 aa16.49■□□□□ 0.23
SMARCA4-207ENST00000541122 GUCY2DQ02846 1103 aa16.49■□□□□ 0.23
SMARCA4-207ENST00000541122 GBP7Q8N8V2 638 aaPredicted RBP16.49■□□□□ 0.23
SMARCA4-207ENST00000541122 TCHPQ9BT92 498 aa16.49■□□□□ 0.23
SMARCA4-207ENST00000541122 VCX3AQ9NNX9 186 aa16.49■□□□□ 0.23
SMARCA4-207ENST00000541122 KIAA0556O60303 1618 aa16.49■□□□□ 0.23
SMARCA4-207ENST00000541122 STAT1P42224 750 aa16.49■□□□□ 0.23
SMARCA4-207ENST00000541122 TADA2BQ86TJ2 420 aa16.49■□□□□ 0.23
SMARCA4-207ENST00000541122 CCHCR1Q8TD31 782 aa16.49■□□□□ 0.23
SMARCA4-207ENST00000541122 NLRC4Q9NPP4 1024 aa16.49■□□□□ 0.23
SMARCA4-207ENST00000541122 KDM5CP41229 1560 aa16.49■□□□□ 0.23
SMARCA4-207ENST00000541122 LDHBP07195 334 aaKnown RBP16.49■□□□□ 0.23
SMARCA4-207ENST00000541122 PEX19P40855 299 aa16.49■□□□□ 0.23
SMARCA4-207ENST00000541122 AKNAD1Q5T1N1 836 aa16.49■□□□□ 0.23
SMARCA4-207ENST00000541122 USP44Q9H0E7 712 aa16.49■□□□□ 0.23
SMARCA4-207ENST00000541122 KDM3AQ9Y4C1 1321 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms