RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 RRP1BQ14684 758 aaKnown RBP14.2□□□□□ -0.14
AP003559.1-201ENST00000540906 SOGA3Q5TF21 947 aa14.2□□□□□ -0.14
AP003559.1-201ENST00000540906 USP17L2Q6R6M4 530 aa14.2□□□□□ -0.14
AP003559.1-201ENST00000540906 LRRC47Q8N1G4 583 aaKnown RBP14.2□□□□□ -0.14
AP003559.1-201ENST00000540906 MTMR4Q9NYA4 1195 aa14.2□□□□□ -0.14
AP003559.1-201ENST00000540906 USP17L5A8MUK1 530 aa14.19□□□□□ -0.14
AP003559.1-201ENST00000540906 HLA-DOAP06340 250 aa14.19□□□□□ -0.14
AP003559.1-201ENST00000540906 NASPP49321 788 aaPredicted RBP14.19□□□□□ -0.14
AP003559.1-201ENST00000540906 TOB1P50616 345 aaPredicted RBP14.19□□□□□ -0.14
AP003559.1-201ENST00000540906 CCDC183Q5T5S1 534 aa14.19□□□□□ -0.14
AP003559.1-201ENST00000540906 TYW1BQ6NUM6 668 aa14.19□□□□□ -0.14
AP003559.1-201ENST00000540906 PHF20Q9BVI0 1012 aa14.19□□□□□ -0.14
AP003559.1-201ENST00000540906 RBSNQ9H1K0 784 aa14.19□□□□□ -0.14
AP003559.1-201ENST00000540906 EHD4Q9H223 541 aa14.19□□□□□ -0.14
AP003559.1-201ENST00000540906 SWAP70Q9UH65 585 aa14.19□□□□□ -0.14
AP003559.1-201ENST00000540906 PCDHA7Q9UN72 937 aa14.19□□□□□ -0.14
AP003559.1-201ENST00000540906 MYO3BQ8WXR4 1341 aa14.18□□□□□ -0.14
AP003559.1-201ENST00000540906 TCP10L2B9ZVM9 353 aa14.18□□□□□ -0.14
AP003559.1-201ENST00000540906 NR1I2O75469 434 aa14.18□□□□□ -0.14
AP003559.1-201ENST00000540906 TOP1P11387 765 aaKnown RBP14.18□□□□□ -0.14
AP003559.1-201ENST00000540906 PTPAQ15257 358 aa14.18□□□□□ -0.14
AP003559.1-201ENST00000540906 CCDC178Q5BJE1 867 aa14.18□□□□□ -0.14
AP003559.1-201ENST00000540906 ANO1Q5XXA6 986 aa14.18□□□□□ -0.14
AP003559.1-201ENST00000540906 ATL3Q6DD88 541 aa14.18□□□□□ -0.14
AP003559.1-201ENST00000540906 GPKOWQ92917 476 aaPredicted RBP eCLIP14.18□□□□□ -0.14
AP003559.1-201ENST00000540906 MAP3K14Q99558 947 aa14.18□□□□□ -0.14
AP003559.1-201ENST00000540906 SYT17Q9BSW7 474 aa14.18□□□□□ -0.14
AP003559.1-201ENST00000540906 VPS33BQ9H267 617 aa14.18□□□□□ -0.14
AP003559.1-201ENST00000540906 GRPEL1Q9HAV7 217 aa14.18□□□□□ -0.14
AP003559.1-201ENST00000540906 POLR3EQ9NVU0 708 aa14.18□□□□□ -0.14
AP003559.1-201ENST00000540906 ZNF70Q9UC06 446 aaPredicted RBP14.18□□□□□ -0.14
AP003559.1-201ENST00000540906 SCAF8Q9UPN6 1271 aaKnown RBP14.18□□□□□ -0.14
AP003559.1-201ENST00000540906 CNTNAP1P78357 1384 aa14.18□□□□□ -0.14
AP003559.1-201ENST00000540906 WNT7AO00755 349 aa14.18□□□□□ -0.14
AP003559.1-201ENST00000540906 NPM3O75607 178 aaKnown RBP14.18□□□□□ -0.14
AP003559.1-201ENST00000540906 EGFRP00533 1210 aa14.18□□□□□ -0.14
AP003559.1-201ENST00000540906 AKAP17AQ02040 695 aaKnown RBP14.18□□□□□ -0.14
AP003559.1-201ENST00000540906 SF3A1Q15459 793 aaKnown RBP14.18□□□□□ -0.14
AP003559.1-201ENST00000540906 LRSAM1Q6UWE0 723 aa14.18□□□□□ -0.14
AP003559.1-201ENST00000540906 NOSTRINQ8IVI9 506 aa14.18□□□□□ -0.14
AP003559.1-201ENST00000540906 ZSCAN29Q8IWY8 852 aaPredicted RBP14.18□□□□□ -0.14
AP003559.1-201ENST00000540906 DACT1Q9NYF0 836 aa14.18□□□□□ -0.14
AP003559.1-201ENST00000540906 ATRNL1Q5VV63 1379 aa14.17□□□□□ -0.14
AP003559.1-201ENST00000540906 ARFGEF1Q9Y6D6 1849 aa14.17□□□□□ -0.14
AP003559.1-201ENST00000540906 MYH4Q9Y623 1939 aa14.17□□□□□ -0.14
AP003559.1-201ENST00000540906 FRMPD2Q68DX3 1309 aaPredicted RBP14.17□□□□□ -0.14
AP003559.1-201ENST00000540906 SCG2P13521 617 aa14.17□□□□□ -0.14
AP003559.1-201ENST00000540906 KIF5BP33176 963 aa14.17□□□□□ -0.14
AP003559.1-201ENST00000540906 STK38Q15208 465 aa14.17□□□□□ -0.14
AP003559.1-201ENST00000540906 PFKFB3Q16875 520 aaPredicted RBP14.17□□□□□ -0.14
AP003559.1-201ENST00000540906 BICD2Q8TD16 824 aa14.17□□□□□ -0.14
AP003559.1-201ENST00000540906 TNFRSF25Q93038 417 aa14.17□□□□□ -0.14
AP003559.1-201ENST00000540906 ZBED3Q96IU2 234 aaPredicted RBP14.17□□□□□ -0.14
AP003559.1-201ENST00000540906 CLIP2Q9UDT6 1046 aa14.17□□□□□ -0.14
AP003559.1-201ENST00000540906 MPHOSPH10O00566 681 aaKnown RBP14.16□□□□□ -0.14
AP003559.1-201ENST00000540906 ENTPD3O75355 529 aa14.16□□□□□ -0.14
AP003559.1-201ENST00000540906 GDF11O95390 407 aa14.16□□□□□ -0.14
AP003559.1-201ENST00000540906 PDHBP11177 359 aa14.16□□□□□ -0.14
AP003559.1-201ENST00000540906 MARCKSP29966 332 aaPredicted RBP14.16□□□□□ -0.14
AP003559.1-201ENST00000540906 GNL2Q13823 731 aaKnown RBP14.16□□□□□ -0.14
AP003559.1-201ENST00000540906 DLGAP5Q15398 846 aa14.16□□□□□ -0.14
AP003559.1-201ENST00000540906 SPDYE2Q495Y8 402 aa14.16□□□□□ -0.14
AP003559.1-201ENST00000540906 CIAPIN1Q6FI81 312 aa14.16□□□□□ -0.14
AP003559.1-201ENST00000540906 TATDN1Q6P1N9 297 aa14.16□□□□□ -0.14
AP003559.1-201ENST00000540906 CCAR1Q8IX12 1150 aaKnown RBP14.16□□□□□ -0.14
AP003559.1-201ENST00000540906 DHX36Q9H2U1 1008 aaKnown RBP14.16□□□□□ -0.14
AP003559.1-201ENST00000540906 PI4KBQ9UBF8 816 aa14.16□□□□□ -0.14
AP003559.1-201ENST00000540906 KLRF2D3W0D1 207 aa14.15□□□□□ -0.14
AP003559.1-201ENST00000540906 SPTLC2O15270 562 aa14.15□□□□□ -0.14
AP003559.1-201ENST00000540906 YEATS4O95619 227 aa14.15□□□□□ -0.14
AP003559.1-201ENST00000540906 ME1P48163 572 aa14.15□□□□□ -0.14
AP003559.1-201ENST00000540906 CAMK4Q16566 473 aa14.15□□□□□ -0.14
AP003559.1-201ENST00000540906 NBPF9Q3BBW0 867 aa14.15□□□□□ -0.14
AP003559.1-201ENST00000540906 AXDND1Q5T1B0 1012 aaPredicted RBP14.15□□□□□ -0.14
AP003559.1-201ENST00000540906 METTL16Q86W50 562 aaKnown RBP14.15□□□□□ -0.14
AP003559.1-201ENST00000540906 SIAH1Q8IUQ4 282 aa14.15□□□□□ -0.14
AP003559.1-201ENST00000540906 AGBL3Q8NEM8 1001 aa14.15□□□□□ -0.14
AP003559.1-201ENST00000540906 SYAP1Q96A49 352 aaPredicted RBP14.15□□□□□ -0.14
AP003559.1-201ENST00000540906 UBA5Q9GZZ9 404 aa14.15□□□□□ -0.14
AP003559.1-201ENST00000540906 FOXP1Q9H334 677 aaPredicted RBP14.15□□□□□ -0.14
AP003559.1-201ENST00000540906 MRVI1Q9Y6F6 885 aa14.15□□□□□ -0.14
AP003559.1-201ENST00000540906 GOLGA6L4A6NEF3 574 aa14.15□□□□□ -0.14
AP003559.1-201ENST00000540906 PARP1P09874 1014 aaKnown RBP14.15□□□□□ -0.14
AP003559.1-201ENST00000540906 SNW1Q13573 536 aaKnown RBP14.15□□□□□ -0.14
AP003559.1-201ENST00000540906 SEPT2Q15019 361 aa14.15□□□□□ -0.14
AP003559.1-201ENST00000540906 SLC39A14Q15043 492 aa14.15□□□□□ -0.14
AP003559.1-201ENST00000540906 WWC2Q6AWC2 1192 aa14.15□□□□□ -0.14
AP003559.1-201ENST00000540906 ENGASEQ8NFI3 743 aa14.15□□□□□ -0.14
AP003559.1-201ENST00000540906 FUCA2Q9BTY2 467 aa14.15□□□□□ -0.14
AP003559.1-201ENST00000540906 HDAC9Q9UKV0 1011 aa14.15□□□□□ -0.14
AP003559.1-201ENST00000540906 PCDHB6Q9Y5E3 794 aa14.15□□□□□ -0.14
AP003559.1-201ENST00000540906 COL2A1P02458 1487 aaPredicted RBP14.14□□□□□ -0.15
AP003559.1-201ENST00000540906 TTLL1O95922 423 aa14.14□□□□□ -0.15
AP003559.1-201ENST00000540906 SNHG28P0DPA3 235 aa14.14□□□□□ -0.15
AP003559.1-201ENST00000540906 KRT2P35908 639 aa14.14□□□□□ -0.15
AP003559.1-201ENST00000540906 ATP2B2Q01814 1243 aa14.14□□□□□ -0.15
AP003559.1-201ENST00000540906 GRIN1Q05586 938 aa14.14□□□□□ -0.15
AP003559.1-201ENST00000540906 SAFBQ15424 915 aaKnown RBP eCLIP14.14□□□□□ -0.15
AP003559.1-201ENST00000540906 CERKLQ49MI3 558 aaPredicted RBP14.14□□□□□ -0.15
AP003559.1-201ENST00000540906 TTBK2Q6IQ55 1244 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms