RNA–Protein interactions for RNA: ENST00000540876.1

CLDN2-202, Transcript of claudin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN2, Length 2,919 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2-202ENST00000540876 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.92□□□□□ -0.66
CLDN2-202ENST00000540876 HSD3B7Q9H2F3 369 aa10.92□□□□□ -0.66
CLDN2-202ENST00000540876 ANAPC4Q9UJX5 808 aa10.92□□□□□ -0.66
CLDN2-202ENST00000540876 TRIM37O94972 964 aa10.92□□□□□ -0.66
CLDN2-202ENST00000540876 MYBL1P10243 752 aa10.92□□□□□ -0.66
CLDN2-202ENST00000540876 USP14P54578 494 aa10.92□□□□□ -0.66
CLDN2-202ENST00000540876 SPATA21Q7Z572 469 aa10.92□□□□□ -0.66
CLDN2-202ENST00000540876 TTC5Q8N0Z6 440 aa10.92□□□□□ -0.66
CLDN2-202ENST00000540876 CCDC97Q96F63 343 aaPredicted RBP10.92□□□□□ -0.66
CLDN2-202ENST00000540876 HOOK1Q9UJC3 728 aaKnown RBP10.92□□□□□ -0.66
CLDN2-202ENST00000540876 ERVV-2B6SEH9 535 aa10.91□□□□□ -0.66
CLDN2-202ENST00000540876 GOLGA8KD6RF30 607 aa10.91□□□□□ -0.66
CLDN2-202ENST00000540876 ADD1P35611 737 aaKnown RBP10.91□□□□□ -0.66
CLDN2-202ENST00000540876 MYL5Q02045 173 aa10.91□□□□□ -0.66
CLDN2-202ENST00000540876 CCDC96Q2M329 555 aa10.91□□□□□ -0.66
CLDN2-202ENST00000540876 BLOC1S2Q6QNY1 142 aa10.91□□□□□ -0.66
CLDN2-202ENST00000540876 MYLK4Q86YV6 388 aaPredicted RBP10.91□□□□□ -0.66
CLDN2-202ENST00000540876 IKBKBO14920 756 aa10.91□□□□□ -0.66
CLDN2-202ENST00000540876 PAPOLAP51003 745 aaKnown RBP10.91□□□□□ -0.66
CLDN2-202ENST00000540876 SEC24CP53992 1094 aa10.91□□□□□ -0.66
CLDN2-202ENST00000540876 HDLBPQ00341 1268 aaKnown RBP10.91□□□□□ -0.66
CLDN2-202ENST00000540876 KCTD16Q68DU8 428 aa10.91□□□□□ -0.66
CLDN2-202ENST00000540876 TRIM58Q8NG06 486 aa10.91□□□□□ -0.66
CLDN2-202ENST00000540876 EPAS1Q99814 870 aa10.91□□□□□ -0.66
CLDN2-202ENST00000540876 ADGRG1Q9Y653 693 aa10.91□□□□□ -0.66
CLDN2-202ENST00000540876 AHCYL1O43865 530 aa10.91□□□□□ -0.66
CLDN2-202ENST00000540876 SURF6O75683 361 aaKnown RBP10.91□□□□□ -0.66
CLDN2-202ENST00000540876 SMNDC1O75940 238 aaKnown RBP eCLIP10.91□□□□□ -0.66
CLDN2-202ENST00000540876 MAGEA8P43361 318 aa10.91□□□□□ -0.66
CLDN2-202ENST00000540876 GUCY1A3Q02108 690 aa10.91□□□□□ -0.66
CLDN2-202ENST00000540876 SPECC1Q5M775 1068 aa10.91□□□□□ -0.66
CLDN2-202ENST00000540876 CWF19L1Q69YN2 538 aaKnown RBP10.91□□□□□ -0.66
CLDN2-202ENST00000540876 SMIM5Q71RC9 77 aa10.91□□□□□ -0.66
CLDN2-202ENST00000540876 NCAPG2Q86XI2 1143 aa10.91□□□□□ -0.66
CLDN2-202ENST00000540876 SH2D3CQ8N5H7 860 aa10.91□□□□□ -0.66
CLDN2-202ENST00000540876 CCDC47Q96A33 483 aaKnown RBP10.91□□□□□ -0.66
CLDN2-202ENST00000540876 ARL8AQ96BM9 186 aa10.91□□□□□ -0.66
CLDN2-202ENST00000540876 ZNF396Q96N95 335 aaPredicted RBP10.91□□□□□ -0.66
CLDN2-202ENST00000540876 RUFY1Q96T51 708 aa10.91□□□□□ -0.66
CLDN2-202ENST00000540876 INTS13Q9NVM9 706 aa10.91□□□□□ -0.66
CLDN2-202ENST00000540876 PCDHA7Q9UN72 937 aa10.91□□□□□ -0.66
CLDN2-202ENST00000540876 PCDHGC5Q9Y5F6 944 aa10.91□□□□□ -0.66
CLDN2-202ENST00000540876 PARP4Q9UKK3 1724 aaKnown RBP10.91□□□□□ -0.66
CLDN2-202ENST00000540876 SHANK3Q9BYB0 1731 aa10.9□□□□□ -0.66
CLDN2-202ENST00000540876 SPDYE3A6NKU9 549 aa10.9□□□□□ -0.66
CLDN2-202ENST00000540876 EIF4E1BA6NMX2 242 aaKnown RBP10.9□□□□□ -0.66
CLDN2-202ENST00000540876 LSP1P33241 339 aa10.9□□□□□ -0.66
CLDN2-202ENST00000540876 ANKRD1Q15327 319 aa10.9□□□□□ -0.66
CLDN2-202ENST00000540876 CREB3L3Q68CJ9 461 aa10.9□□□□□ -0.66
CLDN2-202ENST00000540876 SND1Q7KZF4 910 aaKnown RBP eCLIP10.9□□□□□ -0.66
CLDN2-202ENST00000540876 CPLX3Q8WVH0 158 aa10.9□□□□□ -0.66
CLDN2-202ENST00000540876 RUFY2Q8WXA3 655 aa10.9□□□□□ -0.66
CLDN2-202ENST00000540876 SLC4A9Q96Q91 983 aa10.9□□□□□ -0.66
CLDN2-202ENST00000540876 OSBPL9Q96SU4 736 aa10.9□□□□□ -0.66
CLDN2-202ENST00000540876 ACTR5Q9H9F9 607 aaPredicted RBP10.9□□□□□ -0.66
CLDN2-202ENST00000540876 PAPOLBQ9NRJ5 636 aaKnown RBP10.9□□□□□ -0.66
CLDN2-202ENST00000540876 RGL1Q9NZL6 768 aa10.9□□□□□ -0.66
CLDN2-202ENST00000540876 RBM8AQ9Y5S9 174 aaKnown RBP10.9□□□□□ -0.66
CLDN2-202ENST00000540876 LRRC37A3O60309 1634 aa10.9□□□□□ -0.66
CLDN2-202ENST00000540876 PKD1L3Q7Z443 1732 aa10.9□□□□□ -0.66
CLDN2-202ENST00000540876 OPA1O60313 960 aa10.9□□□□□ -0.66
CLDN2-202ENST00000540876 PPFIA3O75145 1194 aa10.9□□□□□ -0.66
CLDN2-202ENST00000540876 UPP2O95045 317 aa10.9□□□□□ -0.66
CLDN2-202ENST00000540876 FESP07332 822 aa10.9□□□□□ -0.66
CLDN2-202ENST00000540876 GNAT1P11488 350 aa10.9□□□□□ -0.66
CLDN2-202ENST00000540876 ATP5JP18859 108 aa10.9□□□□□ -0.66
CLDN2-202ENST00000540876 PSMA5P28066 241 aa10.9□□□□□ -0.66
CLDN2-202ENST00000540876 GUCY1B3Q02153 619 aa10.9□□□□□ -0.66
CLDN2-202ENST00000540876 SPECC1LQ69YQ0 1117 aa10.9□□□□□ -0.66
CLDN2-202ENST00000540876 RAD9BQ6WBX8 426 aa10.9□□□□□ -0.66
CLDN2-202ENST00000540876 Q6ZUG5 572 aa10.9□□□□□ -0.66
CLDN2-202ENST00000540876 TBC1D5Q92609 795 aa10.9□□□□□ -0.66
CLDN2-202ENST00000540876 CCT8L2Q96SF2 557 aa10.9□□□□□ -0.66
CLDN2-202ENST00000540876 NUP58Q9BVL2 599 aa10.9□□□□□ -0.66
CLDN2-202ENST00000540876 EPN3Q9H201 632 aa10.9□□□□□ -0.66
CLDN2-202ENST00000540876 NOD2Q9HC29 1040 aa10.9□□□□□ -0.66
CLDN2-202ENST00000540876 ERICH2A1L162 156 aa10.89□□□□□ -0.67
CLDN2-202ENST00000540876 TPP2P29144 1249 aaPredicted RBP10.89□□□□□ -0.67
CLDN2-202ENST00000540876 PPARDQ03181 441 aa10.89□□□□□ -0.67
CLDN2-202ENST00000540876 TBX2Q13207 712 aaPredicted RBP10.89□□□□□ -0.67
CLDN2-202ENST00000540876 PROSER3Q2NL68 480 aa10.89□□□□□ -0.67
CLDN2-202ENST00000540876 MFN1Q8IWA4 741 aa10.89□□□□□ -0.67
CLDN2-202ENST00000540876 TSC22D3Q99576 134 aa10.89□□□□□ -0.67
CLDN2-202ENST00000540876 ZNF330Q9Y3S2 320 aaPredicted RBP10.89□□□□□ -0.67
CLDN2-202ENST00000540876 PCDHGA4Q9Y5G9 962 aa10.89□□□□□ -0.67
CLDN2-202ENST00000540876 A6NNZ2 444 aa10.89□□□□□ -0.67
CLDN2-202ENST00000540876 DNM1LO00429 736 aa10.89□□□□□ -0.67
CLDN2-202ENST00000540876 ABL1P00519 1130 aa10.89□□□□□ -0.67
CLDN2-202ENST00000540876 MYL6BP14649 208 aa10.89□□□□□ -0.67
CLDN2-202ENST00000540876 SKOR1P84550 965 aa10.89□□□□□ -0.67
CLDN2-202ENST00000540876 IFFO1Q0D2I5 559 aa10.89□□□□□ -0.67
CLDN2-202ENST00000540876 TUBB8Q3ZCM7 444 aa10.89□□□□□ -0.67
CLDN2-202ENST00000540876 CAPZA3Q96KX2 299 aa10.89□□□□□ -0.67
CLDN2-202ENST00000540876 BLOC1S6Q9UL45 172 aa10.89□□□□□ -0.67
CLDN2-202ENST00000540876 CORO1CQ9ULV4 474 aaPredicted RBP10.89□□□□□ -0.67
CLDN2-202ENST00000540876 UTRNP46939 3433 aa10.89□□□□□ -0.67
CLDN2-202ENST00000540876 AOX1Q06278 1338 aa10.88□□□□□ -0.67
CLDN2-202ENST00000540876 SMIM24O75264 130 aa10.88□□□□□ -0.67
CLDN2-202ENST00000540876 IMPDH2P12268 514 aa10.88□□□□□ -0.67
CLDN2-202ENST00000540876 DRP2Q13474 957 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms