RNA–Protein interactions for RNA: ENST00000540804.5

MSRB3-209, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 2 BASIC

Gene MSRB3, Length 884 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-209ENST00000540804 MAP2K5Q13163 448 aa17.41■□□□□ 0.38
MSRB3-209ENST00000540804 ZSCAN25Q6NSZ9 544 aa17.41■□□□□ 0.38
MSRB3-209ENST00000540804 LBX2Q6XYB7 198 aa17.41■□□□□ 0.38
MSRB3-209ENST00000540804 C16orf86Q6ZW13 317 aa17.41■□□□□ 0.38
MSRB3-209ENST00000540804 KBTBD3Q8NAB2 608 aa17.41■□□□□ 0.38
MSRB3-209ENST00000540804 GSG1L2A8MUP6 293 aa17.4■□□□□ 0.38
MSRB3-209ENST00000540804 M0R2C6 588 aa17.4■□□□□ 0.38
MSRB3-209ENST00000540804 PTPREP23469 700 aa17.4■□□□□ 0.38
MSRB3-209ENST00000540804 ATP2B2Q01814 1243 aa17.4■□□□□ 0.38
MSRB3-209ENST00000540804 NPLOC4Q8TAT6 608 aa17.4■□□□□ 0.38
MSRB3-209ENST00000540804 APBA2Q99767 749 aa17.4■□□□□ 0.38
MSRB3-209ENST00000540804 RBM27Q9P2N5 1060 aaKnown RBP17.4■□□□□ 0.38
MSRB3-209ENST00000540804 TMX2Q9Y320 296 aa17.4■□□□□ 0.38
MSRB3-209ENST00000540804 EEF2P13639 858 aaKnown RBP17.39■□□□□ 0.37
MSRB3-209ENST00000540804 RRP1P56182 461 aaKnown RBP17.39■□□□□ 0.37
MSRB3-209ENST00000540804 COG2Q14746 738 aa17.39■□□□□ 0.37
MSRB3-209ENST00000540804 NECAB2Q7Z6G3 386 aa17.39■□□□□ 0.37
MSRB3-209ENST00000540804 ATG4CQ96DT6 458 aa17.39■□□□□ 0.37
MSRB3-209ENST00000540804 CRBNQ96SW2 442 aa17.39■□□□□ 0.37
MSRB3-209ENST00000540804 SEC62Q99442 399 aaKnown RBP17.39■□□□□ 0.37
MSRB3-209ENST00000540804 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.39■□□□□ 0.37
MSRB3-209ENST00000540804 MOV10L1Q9BXT6 1211 aaKnown RBP17.39■□□□□ 0.37
MSRB3-209ENST00000540804 EPB41L4AQ9HCS5 686 aaPredicted RBP17.39■□□□□ 0.37
MSRB3-209ENST00000540804 OGDHLQ9ULD0 1010 aa17.39■□□□□ 0.37
MSRB3-209ENST00000540804 MINDY4BA8MYZ0 360 aa17.38■□□□□ 0.37
MSRB3-209ENST00000540804 RNF113AO15541 343 aaKnown RBP17.38■□□□□ 0.37
MSRB3-209ENST00000540804 EVI5O60447 810 aa17.38■□□□□ 0.37
MSRB3-209ENST00000540804 DSG3P32926 999 aa17.38■□□□□ 0.37
MSRB3-209ENST00000540804 CCNA1P78396 465 aa17.38■□□□□ 0.37
MSRB3-209ENST00000540804 LHX8Q68G74 356 aa17.38■□□□□ 0.37
MSRB3-209ENST00000540804 AMOTL1Q8IY63 956 aa17.38■□□□□ 0.37
MSRB3-209ENST00000540804 PI4K2BQ8TCG2 481 aa17.38■□□□□ 0.37
MSRB3-209ENST00000540804 APPBP2Q92624 585 aa17.38■□□□□ 0.37
MSRB3-209ENST00000540804 DDRGK1Q96HY6 314 aa17.38■□□□□ 0.37
MSRB3-209ENST00000540804 VCPKMTQ9H867 229 aa17.38■□□□□ 0.37
MSRB3-209ENST00000540804 ARHGEF10LQ9HCE6 1279 aa17.38■□□□□ 0.37
MSRB3-209ENST00000540804 FBXO28Q9NVF7 368 aa17.38■□□□□ 0.37
MSRB3-209ENST00000540804 BAZ2AQ9UIF9 1905 aaKnown RBP17.37■□□□□ 0.37
MSRB3-209ENST00000540804 SLC15A5A6NIM6 579 aa17.37■□□□□ 0.37
MSRB3-209ENST00000540804 GPAA1O43292 621 aa17.37■□□□□ 0.37
MSRB3-209ENST00000540804 FLOT1O75955 427 aa17.37■□□□□ 0.37
MSRB3-209ENST00000540804 CYP2C19P33261 490 aa17.37■□□□□ 0.37
MSRB3-209ENST00000540804 GRB14Q14449 540 aa17.37■□□□□ 0.37
MSRB3-209ENST00000540804 PLS1Q14651 629 aa17.37■□□□□ 0.37
MSRB3-209ENST00000540804 GPATCH3Q96I76 525 aa17.37■□□□□ 0.37
MSRB3-209ENST00000540804 CCDC17Q96LX7 622 aa17.37■□□□□ 0.37
MSRB3-209ENST00000540804 YTHDC1Q96MU7 727 aaKnown RBP17.37■□□□□ 0.37
MSRB3-209ENST00000540804 HOXC10Q9NYD6 342 aa17.37■□□□□ 0.37
MSRB3-209ENST00000540804 ARPP21Q9UBL0 812 aaPredicted RBP17.37■□□□□ 0.37
MSRB3-209ENST00000540804 RAD21O60216 631 aa17.36■□□□□ 0.37
MSRB3-209ENST00000540804 GLRX3O76003 335 aaKnown RBP17.36■□□□□ 0.37
MSRB3-209ENST00000540804 ERCC3P19447 782 aa17.36■□□□□ 0.37
MSRB3-209ENST00000540804 RASA1P20936 1047 aa17.36■□□□□ 0.37
MSRB3-209ENST00000540804 TRMT44Q8IYL2 757 aaKnown RBP17.36■□□□□ 0.37
MSRB3-209ENST00000540804 C7orf61Q8IZ16 206 aa17.36■□□□□ 0.37
MSRB3-209ENST00000540804 ANKLE1Q8NAG6 615 aa17.36■□□□□ 0.37
MSRB3-209ENST00000540804 TRPV1Q8NER1 839 aa17.36■□□□□ 0.37
MSRB3-209ENST00000540804 SPATC1LQ9H0A9 340 aa17.36■□□□□ 0.37
MSRB3-209ENST00000540804 PRO3102Q9H379 93 aa17.36■□□□□ 0.37
MSRB3-209ENST00000540804 C11orf49Q9H6J7 331 aa17.36■□□□□ 0.37
MSRB3-209ENST00000540804 NR2E3Q9Y5X4 410 aa17.36■□□□□ 0.37
MSRB3-209ENST00000540804 PFASO15067 1338 aa17.36■□□□□ 0.37
MSRB3-209ENST00000540804 PRDM1O75626 825 aa17.35■□□□□ 0.37
MSRB3-209ENST00000540804 ADORA2AP29274 412 aa17.35■□□□□ 0.37
MSRB3-209ENST00000540804 SBK1Q52WX2 424 aa17.35■□□□□ 0.37
MSRB3-209ENST00000540804 LPAR1Q92633 364 aa17.35■□□□□ 0.37
MSRB3-209ENST00000540804 NUP88Q99567 741 aaPredicted RBP17.35■□□□□ 0.37
MSRB3-209ENST00000540804 NBPF3Q9H094 633 aa17.35■□□□□ 0.37
MSRB3-209ENST00000540804 STAP2Q9UGK3 403 aa17.35■□□□□ 0.37
MSRB3-209ENST00000540804 ZMYND8Q9ULU4 1186 aaPredicted RBP17.35■□□□□ 0.37
MSRB3-209ENST00000540804 IVNS1ABPQ9Y6Y0 642 aa17.35■□□□□ 0.37
MSRB3-209ENST00000540804 WDR46O15213 610 aaKnown RBP17.34■□□□□ 0.37
MSRB3-209ENST00000540804 COBLO75128 1261 aa17.34■□□□□ 0.37
MSRB3-209ENST00000540804 SYN1P17600 705 aa17.34■□□□□ 0.37
MSRB3-209ENST00000540804 TMEM132BQ14DG7 1078 aa17.34■□□□□ 0.37
MSRB3-209ENST00000540804 FAM83BQ5T0W9 1011 aa17.34■□□□□ 0.37
MSRB3-209ENST00000540804 NCAPG2Q86XI2 1143 aa17.34■□□□□ 0.37
MSRB3-209ENST00000540804 KANSL2Q9H9L4 492 aa17.34■□□□□ 0.37
MSRB3-209ENST00000540804 MKNK2Q9HBH9 465 aa17.34■□□□□ 0.37
MSRB3-209ENST00000540804 TTC41PQ6P2S7 1318 aa17.33■□□□□ 0.36
MSRB3-209ENST00000540804 APPP05067 770 aa17.33■□□□□ 0.36
MSRB3-209ENST00000540804 HOXC6P09630 235 aa17.33■□□□□ 0.36
MSRB3-209ENST00000540804 CAPN2P17655 700 aa17.33■□□□□ 0.36
MSRB3-209ENST00000540804 CNGA1P29973 690 aa17.33■□□□□ 0.36
MSRB3-209ENST00000540804 TDO2P48775 406 aa17.33■□□□□ 0.36
MSRB3-209ENST00000540804 MFSD14CQ5VZR4 134 aa17.33■□□□□ 0.36
MSRB3-209ENST00000540804 DPP9Q86TI2 863 aa17.33■□□□□ 0.36
MSRB3-209ENST00000540804 SH2D4AQ9H788 454 aa17.33■□□□□ 0.36
MSRB3-209ENST00000540804 RLFQ13129 1914 aa17.33■□□□□ 0.36
MSRB3-209ENST00000540804 SALL3Q9BXA9 1300 aa17.32■□□□□ 0.36
MSRB3-209ENST00000540804 MYH7P12883 1935 aa17.32■□□□□ 0.36
MSRB3-209ENST00000540804 IGHA2P01877 340 aa17.32■□□□□ 0.36
MSRB3-209ENST00000540804 ZFYP08048 801 aaPredicted RBP17.32■□□□□ 0.36
MSRB3-209ENST00000540804 PRAMEF19Q5SWL8 479 aa17.32■□□□□ 0.36
MSRB3-209ENST00000540804 ANKRD45Q5TZF3 282 aa17.32■□□□□ 0.36
MSRB3-209ENST00000540804 ANO1Q5XXA6 986 aa17.32■□□□□ 0.36
MSRB3-209ENST00000540804 GIMAP6Q6P9H5 292 aa17.32■□□□□ 0.36
MSRB3-209ENST00000540804 CCDC129Q6ZRS4 1044 aa17.32■□□□□ 0.36
MSRB3-209ENST00000540804 IFNL3Q8IZI9 196 aa17.32■□□□□ 0.36
MSRB3-209ENST00000540804 FSD1Q9BTV5 496 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms