RNA–Protein interactions for RNA: ENST00000540797.5

USP3-204, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2 BASIC

Gene USP3, Length 5,474 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-204ENST00000540797 ADCY9O60503 1353 aa15.75■□□□□ 0.11
USP3-204ENST00000540797 OVOS2A0A0G2JMS6 1433 aa15.75■□□□□ 0.11
USP3-204ENST00000540797 OVOS2A0A0J9YW53 1432 aa15.75■□□□□ 0.11
USP3-204ENST00000540797 OVOS2Q6IE36 1432 aa15.75■□□□□ 0.11
USP3-204ENST00000540797 C21orf2O43822 256 aa15.74■□□□□ 0.11
USP3-204ENST00000540797 TNFAIP3P21580 790 aa15.74■□□□□ 0.11
USP3-204ENST00000540797 INF2Q27J81 1249 aa15.74■□□□□ 0.11
USP3-204ENST00000540797 NOSTRINQ8IVI9 506 aa15.74■□□□□ 0.11
USP3-204ENST00000540797 PLCD3Q8N3E9 789 aa15.74■□□□□ 0.11
USP3-204ENST00000540797 RNF17Q9BXT8 1623 aaKnown RBP15.74■□□□□ 0.11
USP3-204ENST00000540797 ADD2P35612 726 aa15.74■□□□□ 0.11
USP3-204ENST00000540797 MYSM1Q5VVJ2 828 aa15.74■□□□□ 0.11
USP3-204ENST00000540797 PALD1Q9ULE6 856 aa15.74■□□□□ 0.11
USP3-204ENST00000540797 PCDHA1Q9Y5I3 950 aa15.74■□□□□ 0.11
USP3-204ENST00000540797 AKR1B15C9JRZ8 316 aaPredicted RBP15.74■□□□□ 0.11
USP3-204ENST00000540797 POSTNQ15063 836 aa15.74■□□□□ 0.11
USP3-204ENST00000540797 GALNT17Q6IS24 598 aa15.74■□□□□ 0.11
USP3-204ENST00000540797 CTR9Q6PD62 1173 aa15.74■□□□□ 0.11
USP3-204ENST00000540797 COA1Q9GZY4 146 aa15.74■□□□□ 0.11
USP3-204ENST00000540797 H7C1W4 665 aa15.74■□□□□ 0.11
USP3-204ENST00000540797 USP14P54578 494 aa15.74■□□□□ 0.11
USP3-204ENST00000540797 METTL13Q8N6R0 699 aa15.74■□□□□ 0.11
USP3-204ENST00000540797 LZTFL1Q9NQ48 299 aa15.74■□□□□ 0.11
USP3-204ENST00000540797 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.74■□□□□ 0.11
USP3-204ENST00000540797 M0R2C6 588 aa15.74■□□□□ 0.11
USP3-204ENST00000540797 SORBS3O60504 671 aa15.74■□□□□ 0.11
USP3-204ENST00000540797 PI16Q6UXB8 463 aa15.74■□□□□ 0.11
USP3-204ENST00000540797 ARMC9Q7Z3E5 817 aa15.74■□□□□ 0.11
USP3-204ENST00000540797 STAMQ92783 540 aa15.74■□□□□ 0.11
USP3-204ENST00000540797 SERPINB13Q9UIV8 391 aa15.74■□□□□ 0.11
USP3-204ENST00000540797 JCADQ9P266 1359 aa15.73■□□□□ 0.11
USP3-204ENST00000540797 TTLL1O95922 423 aa15.73■□□□□ 0.11
USP3-204ENST00000540797 KARSQ15046 597 aaKnown RBP15.73■□□□□ 0.11
USP3-204ENST00000540797 NEK8Q86SG6 692 aa15.73■□□□□ 0.11
USP3-204ENST00000540797 DEPTORQ8TB45 409 aa15.73■□□□□ 0.11
USP3-204ENST00000540797 PCDHA12Q9UN75 941 aa15.73■□□□□ 0.11
USP3-204ENST00000540797 GDF11O95390 407 aa15.73■□□□□ 0.11
USP3-204ENST00000540797 CCNA1P78396 465 aa15.73■□□□□ 0.11
USP3-204ENST00000540797 KCTD2Q14681 263 aa15.73■□□□□ 0.11
USP3-204ENST00000540797 GPATCH4Q5T3I0 446 aaKnown RBP15.73■□□□□ 0.11
USP3-204ENST00000540797 OTUD6BQ8N6M0 293 aa15.73■□□□□ 0.11
USP3-204ENST00000540797 TPCN1Q9ULQ1 816 aa15.73■□□□□ 0.11
USP3-204ENST00000540797 ADRA2BP18089 450 aa15.73■□□□□ 0.11
USP3-204ENST00000540797 SLFN12Q8IYM2 578 aa15.73■□□□□ 0.11
USP3-204ENST00000540797 CCDC155Q8N6L0 562 aa15.73■□□□□ 0.11
USP3-204ENST00000540797 IGSF22Q8N9C0 903 aa15.73■□□□□ 0.11
USP3-204ENST00000540797 DHX36Q9H2U1 1008 aaKnown RBP15.73■□□□□ 0.11
USP3-204ENST00000540797 POLA2Q14181 598 aa15.72■□□□□ 0.11
USP3-204ENST00000540797 HACE1Q8IYU2 909 aa15.72■□□□□ 0.11
USP3-204ENST00000540797 MAP4K1Q92918 833 aa15.72■□□□□ 0.11
USP3-204ENST00000540797 GPR101Q96P66 508 aaPredicted RBP15.72■□□□□ 0.11
USP3-204ENST00000540797 AMNQ9BXJ7 453 aa15.72■□□□□ 0.11
USP3-204ENST00000540797 BLZF1Q9H2G9 400 aa15.72■□□□□ 0.11
USP3-204ENST00000540797 KANSL2Q9H9L4 492 aa15.72■□□□□ 0.11
USP3-204ENST00000540797 COL15A1P39059 1388 aa15.72■□□□□ 0.11
USP3-204ENST00000540797 TECP42680 631 aa15.72■□□□□ 0.11
USP3-204ENST00000540797 NOLC1Q14978 699 aaKnown RBP eCLIP15.72■□□□□ 0.11
USP3-204ENST00000540797 SLC27A3Q5K4L6 730 aa15.72■□□□□ 0.11
USP3-204ENST00000540797 PLA2G4DQ86XP0 818 aa15.72■□□□□ 0.11
USP3-204ENST00000540797 ATP2A1O14983 1001 aa15.72■□□□□ 0.11
USP3-204ENST00000540797 KRT19P08727 400 aa15.72■□□□□ 0.11
USP3-204ENST00000540797 KRT9P35527 623 aa15.72■□□□□ 0.11
USP3-204ENST00000540797 ASPRV1Q53RT3 343 aa15.72■□□□□ 0.11
USP3-204ENST00000540797 GLI2P10070 1586 aa15.72■□□□□ 0.11
USP3-204ENST00000540797 OSBPP22059 807 aa15.72■□□□□ 0.11
USP3-204ENST00000540797 DIXDC1Q155Q3 683 aa15.72■□□□□ 0.11
USP3-204ENST00000540797 FAM102BQ5T8I3 360 aa15.72■□□□□ 0.11
USP3-204ENST00000540797 LCORLQ8N3X6 602 aa15.72■□□□□ 0.11
USP3-204ENST00000540797 TRIM14Q14142 442 aa15.71■□□□□ 0.11
USP3-204ENST00000540797 NOX5Q96PH1 765 aa15.71■□□□□ 0.11
USP3-204ENST00000540797 MAK16Q9BXY0 300 aaKnown RBP15.71■□□□□ 0.11
USP3-204ENST00000540797 DDX25Q9UHL0 483 aaKnown RBP15.71■□□□□ 0.11
USP3-204ENST00000540797 TULP4Q9NRJ4 1543 aa15.71■□□□□ 0.11
USP3-204ENST00000540797 DPP9Q86TI2 863 aa15.71■□□□□ 0.11
USP3-204ENST00000540797 GPBP1Q86WP2 473 aa15.71■□□□□ 0.11
USP3-204ENST00000540797 GOLGA1Q92805 767 aa15.71■□□□□ 0.11
USP3-204ENST00000540797 TEKT3Q9BXF9 490 aa15.71■□□□□ 0.11
USP3-204ENST00000540797 LSG1Q9H089 658 aaKnown RBP15.71■□□□□ 0.11
USP3-204ENST00000540797 PRKAB2O43741 272 aa15.71■□□□□ 0.11
USP3-204ENST00000540797 FOSP01100 380 aaPredicted RBP15.71■□□□□ 0.11
USP3-204ENST00000540797 NLRP12P59046 1061 aa15.71■□□□□ 0.11
USP3-204ENST00000540797 RNF34Q969K3 372 aa15.71■□□□□ 0.11
USP3-204ENST00000540797 HSF2BPO75031 334 aa15.71■□□□□ 0.11
USP3-204ENST00000540797 TUBB4AP04350 444 aa15.71■□□□□ 0.11
USP3-204ENST00000540797 XKR9Q5GH70 373 aa15.71■□□□□ 0.11
USP3-204ENST00000540797 ZNF569Q5MCW4 686 aa15.71■□□□□ 0.11
USP3-204ENST00000540797 KRT26Q7Z3Y9 468 aa15.71■□□□□ 0.11
USP3-204ENST00000540797 PPP1R14CQ8TAE6 165 aa15.71■□□□□ 0.11
USP3-204ENST00000540797 BAG1Q99933 345 aaPredicted RBP15.71■□□□□ 0.11
USP3-204ENST00000540797 ZBTB7AO95365 584 aa15.71■□□□□ 0.1
USP3-204ENST00000540797 OR52Z1P0C646 297 aa15.71■□□□□ 0.1
USP3-204ENST00000540797 PDIA3P30101 505 aaKnown RBP15.71■□□□□ 0.1
USP3-204ENST00000540797 ASIC2Q16515 512 aa15.71■□□□□ 0.1
USP3-204ENST00000540797 CEP112Q8N8E3 955 aa15.71■□□□□ 0.1
USP3-204ENST00000540797 PI4KBQ9UBF8 816 aa15.71■□□□□ 0.1
USP3-204ENST00000540797 SERTAD1Q9UHV2 236 aa15.71■□□□□ 0.1
USP3-204ENST00000540797 CRB1P82279 1406 aa15.7■□□□□ 0.1
USP3-204ENST00000540797 XRCC6P12956 609 aaKnown RBP eCLIP15.7■□□□□ 0.1
USP3-204ENST00000540797 ARHGEF1Q92888 912 aaKnown RBP15.7■□□□□ 0.1
USP3-204ENST00000540797 CAPZA3Q96KX2 299 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms