RNA–Protein interactions for RNA: ENST00000540768.5

NUP85-203, Transcript of nucleoporin 85, humanhuman

TSL 2 BASIC

Gene NUP85, Length 1,926 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-203ENST00000540768 UBASH3AP57075 661 aa11.33□□□□□ -0.6
NUP85-203ENST00000540768 FAM47AQ5JRC9 791 aa11.33□□□□□ -0.6
NUP85-203ENST00000540768 E4F1Q66K89 784 aaPredicted RBP11.33□□□□□ -0.6
NUP85-203ENST00000540768 TRIML1Q8N9V2 468 aa11.33□□□□□ -0.6
NUP85-203ENST00000540768 ANKRD7Q92527 254 aa11.33□□□□□ -0.6
NUP85-203ENST00000540768 TAF1LQ8IZX4 1826 aa11.33□□□□□ -0.6
NUP85-203ENST00000540768 A0A087X0B3 334 aa11.33□□□□□ -0.6
NUP85-203ENST00000540768 IGSF3O75054 1194 aa11.33□□□□□ -0.6
NUP85-203ENST00000540768 SFPQP23246 707 aaKnown RBP eCLIP11.33□□□□□ -0.6
NUP85-203ENST00000540768 PTPN14Q15678 1187 aa11.33□□□□□ -0.6
NUP85-203ENST00000540768 NOM1Q5C9Z4 860 aaKnown RBP11.33□□□□□ -0.6
NUP85-203ENST00000540768 SPTY2D1Q68D10 685 aaPredicted RBP11.33□□□□□ -0.6
NUP85-203ENST00000540768 RCSD1Q6JBY9 416 aa11.33□□□□□ -0.6
NUP85-203ENST00000540768 KANK3Q6NY19 840 aa11.33□□□□□ -0.6
NUP85-203ENST00000540768 GRAMD1CQ8IYS0 662 aa11.33□□□□□ -0.6
NUP85-203ENST00000540768 MLKLQ8NB16 471 aa11.33□□□□□ -0.6
NUP85-203ENST00000540768 FLAD1Q8NFF5 587 aa11.33□□□□□ -0.6
NUP85-203ENST00000540768 TRMT1Q9NXH9 659 aaKnown RBP11.33□□□□□ -0.6
NUP85-203ENST00000540768 LY75O60449 1722 aa11.32□□□□□ -0.6
NUP85-203ENST00000540768 BMP15O95972 392 aa11.32□□□□□ -0.6
NUP85-203ENST00000540768 SERPINC1P01008 464 aa11.32□□□□□ -0.6
NUP85-203ENST00000540768 ZNF18P17022 549 aa11.32□□□□□ -0.6
NUP85-203ENST00000540768 FMR1Q06787 632 aaKnown RBP eCLIP11.32□□□□□ -0.6
NUP85-203ENST00000540768 SYCP1Q15431 976 aa11.32□□□□□ -0.6
NUP85-203ENST00000540768 SH3RF1Q7Z6J0 888 aa11.32□□□□□ -0.6
NUP85-203ENST00000540768 SLC51AQ86UW1 340 aa11.32□□□□□ -0.6
NUP85-203ENST00000540768 VSTM4Q8IW00 320 aa11.32□□□□□ -0.6
NUP85-203ENST00000540768 PDILTQ8N807 584 aa11.32□□□□□ -0.6
NUP85-203ENST00000540768 CTCFLQ8NI51 663 aaPredicted RBP11.32□□□□□ -0.6
NUP85-203ENST00000540768 ENOX1Q8TC92 643 aaKnown RBP11.32□□□□□ -0.6
NUP85-203ENST00000540768 SMARCE1Q969G3 411 aa11.32□□□□□ -0.6
NUP85-203ENST00000540768 FERMT2Q96AC1 680 aa11.32□□□□□ -0.6
NUP85-203ENST00000540768 MED15Q96RN5 788 aa11.32□□□□□ -0.6
NUP85-203ENST00000540768 TMX1Q9H3N1 280 aa11.32□□□□□ -0.6
NUP85-203ENST00000540768 INTS13Q9NVM9 706 aa11.32□□□□□ -0.6
NUP85-203ENST00000540768 JAG2Q9Y219 1238 aa11.32□□□□□ -0.6
NUP85-203ENST00000540768 USP17L8P0C7I0 530 aa11.31□□□□□ -0.6
NUP85-203ENST00000540768 GRAPQ13588 217 aa11.31□□□□□ -0.6
NUP85-203ENST00000540768 PFKFB3Q16875 520 aaPredicted RBP11.31□□□□□ -0.6
NUP85-203ENST00000540768 C12orf60Q5U649 245 aa11.31□□□□□ -0.6
NUP85-203ENST00000540768 CCDC112Q8NEF3 446 aa11.31□□□□□ -0.6
NUP85-203ENST00000540768 GRAPLQ8TC17 118 aaPredicted RBP11.31□□□□□ -0.6
NUP85-203ENST00000540768 ANKS1AQ92625 1134 aa11.31□□□□□ -0.6
NUP85-203ENST00000540768 EPSTI1Q96J88 318 aa11.31□□□□□ -0.6
NUP85-203ENST00000540768 BRMS1Q9HCU9 246 aa11.31□□□□□ -0.6
NUP85-203ENST00000540768 LEMD3Q9Y2U8 911 aa11.31□□□□□ -0.6
NUP85-203ENST00000540768 TSPY2A6NKD2 308 aa11.31□□□□□ -0.6
NUP85-203ENST00000540768 TMEM232C9JQI7 657 aa11.31□□□□□ -0.6
NUP85-203ENST00000540768 SLFN14P0C7P3 912 aa11.31□□□□□ -0.6
NUP85-203ENST00000540768 SCG2P13521 617 aa11.31□□□□□ -0.6
NUP85-203ENST00000540768 VEGFAP15692 232 aaPredicted RBP11.31□□□□□ -0.6
NUP85-203ENST00000540768 YBX3P16989 372 aaKnown RBP eCLIP11.31□□□□□ -0.6
NUP85-203ENST00000540768 NT5C2P49902 561 aa11.31□□□□□ -0.6
NUP85-203ENST00000540768 ZNF174Q15697 407 aa11.31□□□□□ -0.6
NUP85-203ENST00000540768 CFAP100Q494V2 611 aa11.31□□□□□ -0.6
NUP85-203ENST00000540768 TTC38Q5R3I4 469 aa11.31□□□□□ -0.6
NUP85-203ENST00000540768 DZIP1Q86YF9 867 aaKnown RBP11.31□□□□□ -0.6
NUP85-203ENST00000540768 WDR66Q8TBY9 1149 aa11.31□□□□□ -0.6
NUP85-203ENST00000540768 IL17RBQ9NRM6 502 aa11.31□□□□□ -0.6
NUP85-203ENST00000540768 MCM9Q9NXL9 1143 aa11.31□□□□□ -0.6
NUP85-203ENST00000540768 DACH1Q9UI36 760 aa11.31□□□□□ -0.6
NUP85-203ENST00000540768 ROBO3Q96MS0 1386 aa11.3□□□□□ -0.6
NUP85-203ENST00000540768 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.3□□□□□ -0.6
NUP85-203ENST00000540768 GRIN3BO60391 1043 aa11.3□□□□□ -0.6
NUP85-203ENST00000540768 ATP2C1P98194 919 aaPredicted RBP11.3□□□□□ -0.6
NUP85-203ENST00000540768 NCBP1Q09161 790 aaKnown RBP11.3□□□□□ -0.6
NUP85-203ENST00000540768 TBX2Q13207 712 aaPredicted RBP11.3□□□□□ -0.6
NUP85-203ENST00000540768 NFIXQ14938 502 aa11.3□□□□□ -0.6
NUP85-203ENST00000540768 TRAPPC3LQ5T215 181 aa11.3□□□□□ -0.6
NUP85-203ENST00000540768 C15orf52Q6ZUT6 534 aaKnown RBP11.3□□□□□ -0.6
NUP85-203ENST00000540768 DGKHQ86XP1 1220 aa11.3□□□□□ -0.6
NUP85-203ENST00000540768 SYMPKQ92797 1274 aaKnown RBP11.3□□□□□ -0.6
NUP85-203ENST00000540768 DHX58Q96C10 678 aa11.3□□□□□ -0.6
NUP85-203ENST00000540768 PAGE5Q96GU1 130 aa11.3□□□□□ -0.6
NUP85-203ENST00000540768 PPP1R13BQ96KQ4 1090 aa11.3□□□□□ -0.6
NUP85-203ENST00000540768 NFE2L3Q9Y4A8 694 aa11.3□□□□□ -0.6
NUP85-203ENST00000540768 CEP350Q5VT06 3117 aa11.3□□□□□ -0.6
NUP85-203ENST00000540768 KIF2AO00139 706 aaPredicted RBP11.29□□□□□ -0.6
NUP85-203ENST00000540768 ADAMTS3O15072 1205 aa11.29□□□□□ -0.6
NUP85-203ENST00000540768 LDHBP07195 334 aaKnown RBP11.29□□□□□ -0.6
NUP85-203ENST00000540768 ERCC5P28715 1186 aaPredicted RBP11.29□□□□□ -0.6
NUP85-203ENST00000540768 RFC4P35249 363 aa11.29□□□□□ -0.6
NUP85-203ENST00000540768 TRAPPC10P48553 1259 aa11.29□□□□□ -0.6
NUP85-203ENST00000540768 PLCD1P51178 756 aa11.29□□□□□ -0.6
NUP85-203ENST00000540768 PPP4CP60510 307 aa11.29□□□□□ -0.6
NUP85-203ENST00000540768 TFAP4Q01664 338 aa11.29□□□□□ -0.6
NUP85-203ENST00000540768 GRIK5Q16478 980 aa11.29□□□□□ -0.6
NUP85-203ENST00000540768 CT47A1Q5JQC4 288 aaPredicted RBP11.29□□□□□ -0.6
NUP85-203ENST00000540768 SH3RF3Q8TEJ3 882 aaPredicted RBP11.29□□□□□ -0.6
NUP85-203ENST00000540768 UBE2Q2Q8WVN8 375 aa11.29□□□□□ -0.6
NUP85-203ENST00000540768 ZNF592Q92610 1267 aa11.29□□□□□ -0.6
NUP85-203ENST00000540768 ANKIB1Q9P2G1 1089 aa11.29□□□□□ -0.6
NUP85-203ENST00000540768 CD2APQ9Y5K6 639 aa11.29□□□□□ -0.6
NUP85-203ENST00000540768 XDHP47989 1333 aa11.29□□□□□ -0.6
NUP85-203ENST00000540768 TOP1P11387 765 aaKnown RBP11.29□□□□□ -0.6
NUP85-203ENST00000540768 KIF5BP33176 963 aa11.29□□□□□ -0.6
NUP85-203ENST00000540768 NLRP5P59047 1200 aa11.29□□□□□ -0.6
NUP85-203ENST00000540768 C1QTNF8P60827 252 aa11.29□□□□□ -0.6
NUP85-203ENST00000540768 DPYDQ12882 1025 aa11.29□□□□□ -0.6
NUP85-203ENST00000540768 PTGDRQ13258 359 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms