RNA–Protein interactions for RNA: ENST00000540128.1

TRIM65-202, Transcript of tripartite motif containing 65, humanhuman

TSL 3

Gene TRIM65, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-202ENST00000540128 LAMA4Q16363 1823 aa26.09■■□□□ 1.77
TRIM65-202ENST00000540128 USP17L15C9J2P7 530 aa26.09■■□□□ 1.77
TRIM65-202ENST00000540128 USP17L13C9JLJ4 530 aa26.09■■□□□ 1.77
TRIM65-202ENST00000540128 USP17L11C9JVI0 530 aa26.09■■□□□ 1.77
TRIM65-202ENST00000540128 USP17L18D6R9N7 530 aa26.09■■□□□ 1.77
TRIM65-202ENST00000540128 USP17L22D6RA61 530 aa26.09■■□□□ 1.77
TRIM65-202ENST00000540128 USP17L17D6RBQ6 530 aa26.09■■□□□ 1.77
TRIM65-202ENST00000540128 USP17L19D6RCP7 530 aa26.09■■□□□ 1.77
TRIM65-202ENST00000540128 USP17L20D6RJB6 530 aa26.09■■□□□ 1.77
TRIM65-202ENST00000540128 ATP2B2Q01814 1243 aa26.09■■□□□ 1.77
TRIM65-202ENST00000540128 USP17L24Q0WX57 530 aa26.09■■□□□ 1.77
TRIM65-202ENST00000540128 CATSPERGQ6ZRH7 1159 aa26.09■■□□□ 1.77
TRIM65-202ENST00000540128 NKX2-3Q8TAU0 364 aa26.09■■□□□ 1.77
TRIM65-202ENST00000540128 ANO2Q9NQ90 1003 aa26.09■■□□□ 1.77
TRIM65-202ENST00000540128 NEDD4P46934 1319 aa26.09■■□□□ 1.77
TRIM65-202ENST00000540128 CASP8AP2Q9UKL3 1982 aa26.08■■□□□ 1.77
TRIM65-202ENST00000540128 BCRP11274 1271 aa26.08■■□□□ 1.77
TRIM65-202ENST00000540128 SP3Q02447 781 aa26.08■■□□□ 1.77
TRIM65-202ENST00000540128 P2RX7Q99572 595 aaKnown RBP26.08■■□□□ 1.77
TRIM65-202ENST00000540128 KRT23Q9C075 422 aa26.08■■□□□ 1.77
TRIM65-202ENST00000540128 CNNM2Q9H8M5 875 aa26.08■■□□□ 1.77
TRIM65-202ENST00000540128 GOPCQ9HD26 462 aa26.08■■□□□ 1.77
TRIM65-202ENST00000540128 NMT2O60551 498 aa26.07■■□□□ 1.76
TRIM65-202ENST00000540128 GCLCP48506 637 aaPredicted RBP26.07■■□□□ 1.76
TRIM65-202ENST00000540128 IRX3P78415 501 aaPredicted RBP26.07■■□□□ 1.76
TRIM65-202ENST00000540128 NECTIN1Q15223 517 aa26.07■■□□□ 1.76
TRIM65-202ENST00000540128 RPAP3Q9H6T3 665 aaPredicted RBP26.07■■□□□ 1.76
TRIM65-202ENST00000540128 CPA4Q9UI42 421 aa26.07■■□□□ 1.76
TRIM65-202ENST00000540128 F5H6K3 240 aa26.06■■□□□ 1.76
TRIM65-202ENST00000540128 WDR46O15213 610 aaKnown RBP26.06■■□□□ 1.76
TRIM65-202ENST00000540128 KLRC3Q07444 240 aa26.06■■□□□ 1.76
TRIM65-202ENST00000540128 GMCL1P1Q8NEA9 526 aa26.06■■□□□ 1.76
TRIM65-202ENST00000540128 SMCR8Q8TEV9 937 aaPredicted RBP26.06■■□□□ 1.76
TRIM65-202ENST00000540128 TTC14Q96N46 770 aa26.06■■□□□ 1.76
TRIM65-202ENST00000540128 KDM4AO75164 1064 aa26.05■■□□□ 1.76
TRIM65-202ENST00000540128 GTF3C2Q8WUA4 911 aaPredicted RBP26.05■■□□□ 1.76
TRIM65-202ENST00000540128 ZSWIM5Q9P217 1185 aa26.05■■□□□ 1.76
TRIM65-202ENST00000540128 B4E1Z4 1266 aa26.04■■□□□ 1.76
TRIM65-202ENST00000540128 HERVK_113P62684 666 aa26.04■■□□□ 1.76
TRIM65-202ENST00000540128 CCDC178Q5BJE1 867 aa26.04■■□□□ 1.76
TRIM65-202ENST00000540128 LBX2Q6XYB7 198 aa26.04■■□□□ 1.76
TRIM65-202ENST00000540128 SPICE1Q8N0Z3 855 aa26.04■■□□□ 1.76
TRIM65-202ENST00000540128 ANKS1AQ92625 1134 aa26.04■■□□□ 1.76
TRIM65-202ENST00000540128 ERO1AQ96HE7 468 aa26.04■■□□□ 1.76
TRIM65-202ENST00000540128 STX8Q9UNK0 236 aa26.04■■□□□ 1.76
TRIM65-202ENST00000540128 TAF6LQ9Y6J9 622 aa26.04■■□□□ 1.76
TRIM65-202ENST00000540128 NDUFB10O96000 172 aa26.03■■□□□ 1.76
TRIM65-202ENST00000540128 COG2Q14746 738 aa26.03■■□□□ 1.76
TRIM65-202ENST00000540128 RCSD1Q6JBY9 416 aa26.03■■□□□ 1.76
TRIM65-202ENST00000540128 DGKHQ86XP1 1220 aa26.03■■□□□ 1.76
TRIM65-202ENST00000540128 HOXC10Q9NYD6 342 aa26.03■■□□□ 1.76
TRIM65-202ENST00000540128 E7EWF7 191 aa26.02■■□□□ 1.76
TRIM65-202ENST00000540128 SLC27A2O14975 620 aa26.02■■□□□ 1.76
TRIM65-202ENST00000540128 TRDNQ13061 729 aa26.02■■□□□ 1.76
TRIM65-202ENST00000540128 FAM110CQ1W6H9 321 aa26.02■■□□□ 1.76
TRIM65-202ENST00000540128 COL13A1Q5TAT6 717 aaPredicted RBP26.02■■□□□ 1.76
TRIM65-202ENST00000540128 CREB3L3Q68CJ9 461 aa26.02■■□□□ 1.76
TRIM65-202ENST00000540128 POTEEQ6S8J3 1075 aa26.02■■□□□ 1.76
TRIM65-202ENST00000540128 STOX1Q6ZVD7 989 aa26.02■■□□□ 1.76
TRIM65-202ENST00000540128 LRRC47Q8N1G4 583 aaKnown RBP26.02■■□□□ 1.76
TRIM65-202ENST00000540128 MORF4L1Q9UBU8 362 aa26.02■■□□□ 1.76
TRIM65-202ENST00000540128 EPB41L2O43491 1005 aaKnown RBP26.01■■□□□ 1.75
TRIM65-202ENST00000540128 TOP1P11387 765 aaKnown RBP26.01■■□□□ 1.75
TRIM65-202ENST00000540128 LACTBP83111 547 aaPredicted RBP26.01■■□□□ 1.75
TRIM65-202ENST00000540128 IQCA1Q86XH1 822 aa26.01■■□□□ 1.75
TRIM65-202ENST00000540128 RBPJLQ9UBG7 517 aa26.01■■□□□ 1.75
TRIM65-202ENST00000540128 MYPNQ86TC9 1320 aa26■■□□□ 1.75
TRIM65-202ENST00000540128 REC8O95072 547 aa26■■□□□ 1.75
TRIM65-202ENST00000540128 TSGA10IPQ3SY00 556 aa26■■□□□ 1.75
TRIM65-202ENST00000540128 SLFN13Q68D06 897 aa26■■□□□ 1.75
TRIM65-202ENST00000540128 ANKRD13CQ8N6S4 541 aa26■■□□□ 1.75
TRIM65-202ENST00000540128 NCOA7Q8NI08 942 aa26■■□□□ 1.75
TRIM65-202ENST00000540128 GMCL1Q96IK5 515 aa26■■□□□ 1.75
TRIM65-202ENST00000540128 ZSCAN10Q96SZ4 725 aaPredicted RBP26■■□□□ 1.75
TRIM65-202ENST00000540128 TMEM47Q9BQJ4 181 aa26■■□□□ 1.75
TRIM65-202ENST00000540128 TANGO6Q9C0B7 1094 aa26■■□□□ 1.75
TRIM65-202ENST00000540128 MYH4Q9Y623 1939 aa26■■□□□ 1.75
TRIM65-202ENST00000540128 SPDYE16A6NNV3 312 aaPredicted RBP25.99■■□□□ 1.75
TRIM65-202ENST00000540128 DSG3P32926 999 aa25.99■■□□□ 1.75
TRIM65-202ENST00000540128 CAP1Q01518 475 aa25.99■■□□□ 1.75
TRIM65-202ENST00000540128 FAM83BQ5T0W9 1011 aa25.99■■□□□ 1.75
TRIM65-202ENST00000540128 RNF20Q5VTR2 975 aa25.99■■□□□ 1.75
TRIM65-202ENST00000540128 CTU1Q7Z7A3 348 aaKnown RBP25.99■■□□□ 1.75
TRIM65-202ENST00000540128 CD99L2Q8TCZ2 262 aa25.99■■□□□ 1.75
TRIM65-202ENST00000540128 KCNB2Q92953 911 aa25.99■■□□□ 1.75
TRIM65-202ENST00000540128 ADAMTS5Q9UNA0 930 aa25.99■■□□□ 1.75
TRIM65-202ENST00000540128 RABGAP1Q9Y3P9 1069 aa25.99■■□□□ 1.75
TRIM65-202ENST00000540128 ARHGEF6Q15052 776 aa25.98■■□□□ 1.75
TRIM65-202ENST00000540128 CYB5R4Q7L1T6 521 aa25.98■■□□□ 1.75
TRIM65-202ENST00000540128 TXNRD2Q9NNW7 524 aa25.98■■□□□ 1.75
TRIM65-202ENST00000540128 FLOT1O75955 427 aa25.97■■□□□ 1.75
TRIM65-202ENST00000540128 KIF22Q14807 665 aa25.97■■□□□ 1.75
TRIM65-202ENST00000540128 GPRC5AQ8NFJ5 357 aa25.97■■□□□ 1.75
TRIM65-202ENST00000540128 NUP88Q99567 741 aaPredicted RBP25.97■■□□□ 1.75
TRIM65-202ENST00000540128 ZKSCAN3Q9BRR0 538 aa25.97■■□□□ 1.75
TRIM65-202ENST00000540128 RLFQ13129 1914 aa25.96■■□□□ 1.75
TRIM65-202ENST00000540128 RAD21O60216 631 aa25.96■■□□□ 1.75
TRIM65-202ENST00000540128 GNRH1P01148 92 aa25.96■■□□□ 1.75
TRIM65-202ENST00000540128 BMP3P12645 472 aa25.96■■□□□ 1.75
TRIM65-202ENST00000540128 CTGFP29279 349 aa25.96■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms