RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 C7orf61Q8IZ16 206 aa18.37■□□□□ 0.53
UBE3B-211ENST00000539843 DIS3LQ8TF46 1054 aaKnown RBP18.37■□□□□ 0.53
UBE3B-211ENST00000539843 USP17L12C9JPN9 530 aa18.36■□□□□ 0.53
UBE3B-211ENST00000539843 USP17L21D6R901 530 aa18.36■□□□□ 0.53
UBE3B-211ENST00000539843 PRKAB2O43741 272 aa18.36■□□□□ 0.53
UBE3B-211ENST00000539843 STRNO43815 780 aa18.36■□□□□ 0.53
UBE3B-211ENST00000539843 CNMDO75829 334 aa18.36■□□□□ 0.53
UBE3B-211ENST00000539843 C12orf60Q5U649 245 aa18.36■□□□□ 0.53
UBE3B-211ENST00000539843 SLC44A5Q8NCS7 719 aa18.36■□□□□ 0.53
UBE3B-211ENST00000539843 DYNLL2Q96FJ2 89 aa18.36■□□□□ 0.53
UBE3B-211ENST00000539843 WDR46O15213 610 aaKnown RBP18.35■□□□□ 0.53
UBE3B-211ENST00000539843 AKR1B1P15121 316 aa18.35■□□□□ 0.53
UBE3B-211ENST00000539843 CNGA1P29973 690 aa18.35■□□□□ 0.53
UBE3B-211ENST00000539843 CDK8P49336 464 aa18.35■□□□□ 0.53
UBE3B-211ENST00000539843 GRB14Q14449 540 aa18.35■□□□□ 0.53
UBE3B-211ENST00000539843 PLS1Q14651 629 aa18.35■□□□□ 0.53
UBE3B-211ENST00000539843 CCL14Q16627 93 aa18.35■□□□□ 0.53
UBE3B-211ENST00000539843 C16orf86Q6ZW13 317 aa18.35■□□□□ 0.53
UBE3B-211ENST00000539843 SHCBP1Q8NEM2 672 aa18.35■□□□□ 0.53
UBE3B-211ENST00000539843 SPATC1LQ9H0A9 340 aa18.35■□□□□ 0.53
UBE3B-211ENST00000539843 VCPKMTQ9H867 229 aa18.35■□□□□ 0.53
UBE3B-211ENST00000539843 KANSL2Q9H9L4 492 aa18.35■□□□□ 0.53
UBE3B-211ENST00000539843 ZNF287Q9HBT7 754 aa18.35■□□□□ 0.53
UBE3B-211ENST00000539843 GOPCQ9HD26 462 aa18.35■□□□□ 0.53
UBE3B-211ENST00000539843 BTBD7Q9P203 1132 aa18.35■□□□□ 0.53
UBE3B-211ENST00000539843 ZBTB47Q9UFB7 747 aaPredicted RBP18.35■□□□□ 0.53
UBE3B-211ENST00000539843 TMX2Q9Y320 296 aa18.35■□□□□ 0.53
UBE3B-211ENST00000539843 A0A1W2PRG0 241 aa18.34■□□□□ 0.53
UBE3B-211ENST00000539843 RAD21O60216 631 aa18.34■□□□□ 0.53
UBE3B-211ENST00000539843 SMARCA5O60264 1052 aaPredicted RBP18.34■□□□□ 0.53
UBE3B-211ENST00000539843 ZFYP08048 801 aaPredicted RBP18.34■□□□□ 0.53
UBE3B-211ENST00000539843 HOXC6P09630 235 aa18.34■□□□□ 0.53
UBE3B-211ENST00000539843 CCND3P30281 292 aaPredicted RBP18.34■□□□□ 0.53
UBE3B-211ENST00000539843 C20orf194Q5TEA3 1177 aa18.34■□□□□ 0.53
UBE3B-211ENST00000539843 SAMD1Q6SPF0 538 aaPredicted RBP18.34■□□□□ 0.53
UBE3B-211ENST00000539843 MROH8Q9H579 483 aa18.34■□□□□ 0.53
UBE3B-211ENST00000539843 ERC2O15083 957 aa18.33■□□□□ 0.52
UBE3B-211ENST00000539843 GNAT2P19087 354 aa18.33■□□□□ 0.52
UBE3B-211ENST00000539843 DSG3P32926 999 aa18.33■□□□□ 0.52
UBE3B-211ENST00000539843 NCAPG2Q86XI2 1143 aa18.33■□□□□ 0.52
UBE3B-211ENST00000539843 SPICE1Q8N0Z3 855 aa18.33■□□□□ 0.52
UBE3B-211ENST00000539843 KBTBD3Q8NAB2 608 aa18.33■□□□□ 0.52
UBE3B-211ENST00000539843 MOV10L1Q9BXT6 1211 aaKnown RBP18.33■□□□□ 0.52
UBE3B-211ENST00000539843 MKNK2Q9HBH9 465 aa18.33■□□□□ 0.52
UBE3B-211ENST00000539843 SLC25A27O95847 323 aa18.32■□□□□ 0.52
UBE3B-211ENST00000539843 ERCC3P19447 782 aa18.32■□□□□ 0.52
UBE3B-211ENST00000539843 ADORA2AP29274 412 aa18.32■□□□□ 0.52
UBE3B-211ENST00000539843 COPB2P35606 906 aa18.32■□□□□ 0.52
UBE3B-211ENST00000539843 GIMAP6Q6P9H5 292 aa18.32■□□□□ 0.52
UBE3B-211ENST00000539843 POTEEQ6S8J3 1075 aa18.32■□□□□ 0.52
UBE3B-211ENST00000539843 APPBP2Q92624 585 aa18.32■□□□□ 0.52
UBE3B-211ENST00000539843 PUS7LQ9H0K6 701 aaKnown RBP18.32■□□□□ 0.52
UBE3B-211ENST00000539843 DCTPP1Q9H773 170 aa18.32■□□□□ 0.52
UBE3B-211ENST00000539843 DDX20Q9UHI6 824 aaKnown RBP18.32■□□□□ 0.52
UBE3B-211ENST00000539843 PLXNB2O15031 1838 aa18.32■□□□□ 0.52
UBE3B-211ENST00000539843 TRIOBPQ9H2D6 2365 aa18.32■□□□□ 0.52
UBE3B-211ENST00000539843 CYP2D7A0A087X1C5 515 aa18.31■□□□□ 0.52
UBE3B-211ENST00000539843 TDO2P48775 406 aa18.31■□□□□ 0.52
UBE3B-211ENST00000539843 EVX2Q03828 476 aa18.31■□□□□ 0.52
UBE3B-211ENST00000539843 SLFNL1Q499Z3 407 aa18.31■□□□□ 0.52
UBE3B-211ENST00000539843 OLFML2BQ68BL8 750 aa18.31■□□□□ 0.52
UBE3B-211ENST00000539843 CTR9Q6PD62 1173 aa18.31■□□□□ 0.52
UBE3B-211ENST00000539843 STAP2Q9UGK3 403 aa18.31■□□□□ 0.52
UBE3B-211ENST00000539843 ZMYND8Q9ULU4 1186 aaPredicted RBP18.31■□□□□ 0.52
UBE3B-211ENST00000539843 RNF113AO15541 343 aaKnown RBP18.3■□□□□ 0.52
UBE3B-211ENST00000539843 APPP05067 770 aa18.3■□□□□ 0.52
UBE3B-211ENST00000539843 FCER1AP12319 257 aa18.3■□□□□ 0.52
UBE3B-211ENST00000539843 EEF2P13639 858 aaKnown RBP18.3■□□□□ 0.52
UBE3B-211ENST00000539843 ABRAQ8N0Z2 381 aa18.3■□□□□ 0.52
UBE3B-211ENST00000539843 ATG4CQ96DT6 458 aa18.3■□□□□ 0.52
UBE3B-211ENST00000539843 NACAP1Q9BZK3 213 aa18.3■□□□□ 0.52
UBE3B-211ENST00000539843 PRO3102Q9H379 93 aa18.3■□□□□ 0.52
UBE3B-211ENST00000539843 CTDP1Q9Y5B0 961 aaPredicted RBP18.3■□□□□ 0.52
UBE3B-211ENST00000539843 TTC41PQ6P2S7 1318 aa18.29■□□□□ 0.52
UBE3B-211ENST00000539843 MINDY4BA8MYZ0 360 aa18.29■□□□□ 0.52
UBE3B-211ENST00000539843 SLC3A2P08195 630 aaKnown RBP18.29■□□□□ 0.52
UBE3B-211ENST00000539843 CYP2C19P33261 490 aa18.29■□□□□ 0.52
UBE3B-211ENST00000539843 KCTD2Q14681 263 aa18.29■□□□□ 0.52
UBE3B-211ENST00000539843 SBK1Q52WX2 424 aa18.29■□□□□ 0.52
UBE3B-211ENST00000539843 LHX8Q68G74 356 aa18.29■□□□□ 0.52
UBE3B-211ENST00000539843 CLEC10AQ8IUN9 316 aa18.29■□□□□ 0.52
UBE3B-211ENST00000539843 ARRDC4Q8NCT1 418 aa18.29■□□□□ 0.52
UBE3B-211ENST00000539843 STRBPQ96SI9 672 aaKnown RBP18.29■□□□□ 0.52
UBE3B-211ENST00000539843 FLRT1Q9NZU1 646 aa18.29■□□□□ 0.52
UBE3B-211ENST00000539843 PRKAG2Q9UGJ0 569 aa18.29■□□□□ 0.52
UBE3B-211ENST00000539843 MYH8P13535 1937 aa18.29■□□□□ 0.52
UBE3B-211ENST00000539843 BMP8BP34820 402 aa18.28■□□□□ 0.52
UBE3B-211ENST00000539843 MNX1P50219 401 aaPredicted RBP18.28■□□□□ 0.52
UBE3B-211ENST00000539843 NPLOC4Q8TAT6 608 aa18.28■□□□□ 0.52
UBE3B-211ENST00000539843 PFASO15067 1338 aa18.27■□□□□ 0.52
UBE3B-211ENST00000539843 KBTBD13C9JR72 458 aa18.27■□□□□ 0.52
UBE3B-211ENST00000539843 DNM1LO00429 736 aa18.27■□□□□ 0.52
UBE3B-211ENST00000539843 GPAA1O43292 621 aa18.27■□□□□ 0.52
UBE3B-211ENST00000539843 COL6A1P12109 1028 aa18.27■□□□□ 0.52
UBE3B-211ENST00000539843 SYN1P17600 705 aa18.27■□□□□ 0.52
UBE3B-211ENST00000539843 ZNF444Q8N0Y2 327 aaPredicted RBP18.27■□□□□ 0.52
UBE3B-211ENST00000539843 MMP19Q99542 508 aa18.27■□□□□ 0.52
UBE3B-211ENST00000539843 SENP6Q9GZR1 1112 aaPredicted RBP18.27■□□□□ 0.52
UBE3B-211ENST00000539843 MYH7P12883 1935 aa18.26■□□□□ 0.51
UBE3B-211ENST00000539843 CHGBP05060 677 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms