RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 PALM3A6NDB9 673 aaPredicted RBP25.87■■□□□ 1.73
HOMER3-204ENST00000539827 KRT2P35908 639 aa25.87■■□□□ 1.73
HOMER3-204ENST00000539827 TOB1P50616 345 aaPredicted RBP25.87■■□□□ 1.73
HOMER3-204ENST00000539827 PFKFB3Q16875 520 aaPredicted RBP25.87■■□□□ 1.73
HOMER3-204ENST00000539827 SLC35G1Q2M3R5 365 aa25.87■■□□□ 1.73
HOMER3-204ENST00000539827 CLEC10AQ8IUN9 316 aa25.87■■□□□ 1.73
HOMER3-204ENST00000539827 CKAP2LQ8IYA6 745 aa25.87■■□□□ 1.73
HOMER3-204ENST00000539827 KLHL34Q8N239 644 aa25.87■■□□□ 1.73
HOMER3-204ENST00000539827 PRMT6Q96LA8 375 aaPredicted RBP25.87■■□□□ 1.73
HOMER3-204ENST00000539827 PLIN4Q96Q06 1357 aa25.87■■□□□ 1.73
HOMER3-204ENST00000539827 NOVP48745 357 aa25.86■■□□□ 1.73
HOMER3-204ENST00000539827 DALRD3Q5D0E6 543 aaKnown RBP25.86■■□□□ 1.73
HOMER3-204ENST00000539827 SOGA3Q5TF21 947 aa25.86■■□□□ 1.73
HOMER3-204ENST00000539827 SH3BP5LQ7L8J4 393 aa25.86■■□□□ 1.73
HOMER3-204ENST00000539827 ZSCAN29Q8IWY8 852 aaPredicted RBP25.86■■□□□ 1.73
HOMER3-204ENST00000539827 MRPS27Q92552 414 aaKnown RBP25.86■■□□□ 1.73
HOMER3-204ENST00000539827 MTMR4Q9NYA4 1195 aa25.86■■□□□ 1.73
HOMER3-204ENST00000539827 IGKV6D-41A0A0C4DH26 115 aa25.86■■□□□ 1.73
HOMER3-204ENST00000539827 A0A1W2PQ27 194 aa25.86■■□□□ 1.73
HOMER3-204ENST00000539827 A0A1W2PQ64 194 aa25.86■■□□□ 1.73
HOMER3-204ENST00000539827 A0A1W2PQD8 194 aa25.86■■□□□ 1.73
HOMER3-204ENST00000539827 VIL1P09327 827 aaKnown RBP25.86■■□□□ 1.73
HOMER3-204ENST00000539827 EIF6P56537 245 aaKnown RBP25.86■■□□□ 1.73
HOMER3-204ENST00000539827 CABP5Q9NP86 173 aa25.86■■□□□ 1.73
HOMER3-204ENST00000539827 ZBTB12Q9Y330 459 aaPredicted RBP25.86■■□□□ 1.73
HOMER3-204ENST00000539827 A0A1B0GVL5 298 aa25.85■■□□□ 1.73
HOMER3-204ENST00000539827 FAM196BA6NMK8 535 aa25.85■■□□□ 1.73
HOMER3-204ENST00000539827 SNW1Q13573 536 aaKnown RBP25.85■■□□□ 1.73
HOMER3-204ENST00000539827 NIM1KQ8IY84 436 aa25.85■■□□□ 1.73
HOMER3-204ENST00000539827 ENGASEQ8NFI3 743 aa25.85■■□□□ 1.73
HOMER3-204ENST00000539827 EHD4Q9H223 541 aa25.85■■□□□ 1.73
HOMER3-204ENST00000539827 FAM205CA6NFA0 338 aa25.84■■□□□ 1.73
HOMER3-204ENST00000539827 MPHOSPH10O00566 681 aaKnown RBP25.84■■□□□ 1.73
HOMER3-204ENST00000539827 ATP2B1P20020 1258 aa25.84■■□□□ 1.73
HOMER3-204ENST00000539827 AXDND1Q5T1B0 1012 aaPredicted RBP25.84■■□□□ 1.73
HOMER3-204ENST00000539827 USP17L2Q6R6M4 530 aa25.84■■□□□ 1.73
HOMER3-204ENST00000539827 DHX36Q9H2U1 1008 aaKnown RBP25.84■■□□□ 1.73
HOMER3-204ENST00000539827 CPVLQ9H3G5 476 aa25.84■■□□□ 1.73
HOMER3-204ENST00000539827 DNAJC18Q9H819 358 aa25.84■■□□□ 1.73
HOMER3-204ENST00000539827 MYO3BQ8WXR4 1341 aa25.84■■□□□ 1.73
HOMER3-204ENST00000539827 CYTH3O43739 400 aa25.84■■□□□ 1.73
HOMER3-204ENST00000539827 PARP1P09874 1014 aaKnown RBP25.84■■□□□ 1.73
HOMER3-204ENST00000539827 NLRP5P59047 1200 aa25.84■■□□□ 1.73
HOMER3-204ENST00000539827 FAM160A1Q05DH4 1040 aa25.84■■□□□ 1.73
HOMER3-204ENST00000539827 EARS2Q5JPH6 523 aaKnown RBP25.84■■□□□ 1.73
HOMER3-204ENST00000539827 LRRC47Q8N1G4 583 aaKnown RBP25.84■■□□□ 1.73
HOMER3-204ENST00000539827 GPKOWQ92917 476 aaPredicted RBP eCLIP25.84■■□□□ 1.73
HOMER3-204ENST00000539827 VPS33BQ9H267 617 aa25.84■■□□□ 1.73
HOMER3-204ENST00000539827 SIPA1L1O43166 1804 aa25.83■■□□□ 1.73
HOMER3-204ENST00000539827 KLRF2D3W0D1 207 aa25.83■■□□□ 1.73
HOMER3-204ENST00000539827 NPY5RQ15761 445 aa25.83■■□□□ 1.73
HOMER3-204ENST00000539827 RILPL1Q5EBL4 403 aa25.83■■□□□ 1.73
HOMER3-204ENST00000539827 GMLQ99445 158 aa25.83■■□□□ 1.73
HOMER3-204ENST00000539827 BRMS1Q9HCU9 246 aa25.83■■□□□ 1.73
HOMER3-204ENST00000539827 CLIP2Q9UDT6 1046 aa25.83■■□□□ 1.73
HOMER3-204ENST00000539827 ZNRF3Q9ULT6 936 aa25.83■■□□□ 1.73
HOMER3-204ENST00000539827 USP17L5A8MUK1 530 aa25.82■■□□□ 1.72
HOMER3-204ENST00000539827 PPP6R2O75170 966 aa25.82■■□□□ 1.72
HOMER3-204ENST00000539827 LZTS2Q9BRK4 669 aa25.82■■□□□ 1.72
HOMER3-204ENST00000539827 NPM3O75607 178 aaKnown RBP25.82■■□□□ 1.72
HOMER3-204ENST00000539827 NDUFA8P51970 172 aa25.82■■□□□ 1.72
HOMER3-204ENST00000539827 PI4KBQ9UBF8 816 aa25.82■■□□□ 1.72
HOMER3-204ENST00000539827 PCDHB6Q9Y5E3 794 aa25.82■■□□□ 1.72
HOMER3-204ENST00000539827 NOM1Q5C9Z4 860 aaKnown RBP25.81■■□□□ 1.72
HOMER3-204ENST00000539827 RBM43Q6ZSC3 357 aaKnown RBP25.81■■□□□ 1.72
HOMER3-204ENST00000539827 JMYQ8N9B5 988 aa25.81■■□□□ 1.72
HOMER3-204ENST00000539827 HDAC9Q9UKV0 1011 aa25.81■■□□□ 1.72
HOMER3-204ENST00000539827 ADAMTS3O15072 1205 aa25.8■■□□□ 1.72
HOMER3-204ENST00000539827 KINO60870 393 aaKnown RBP25.8■■□□□ 1.72
HOMER3-204ENST00000539827 CCDC192P0DO97 292 aa25.8■■□□□ 1.72
HOMER3-204ENST00000539827 FMR1NBQ8N0W7 255 aaPredicted RBP25.8■■□□□ 1.72
HOMER3-204ENST00000539827 CLIC6Q96NY7 704 aa25.8■■□□□ 1.72
HOMER3-204ENST00000539827 TRIM34Q9BYJ4 488 aa25.8■■□□□ 1.72
HOMER3-204ENST00000539827 PSDA5PKW4 1024 aaPredicted RBP25.8■■□□□ 1.72
HOMER3-204ENST00000539827 TTLL1O95922 423 aa25.8■■□□□ 1.72
HOMER3-204ENST00000539827 TNFRSF25Q93038 417 aa25.8■■□□□ 1.72
HOMER3-204ENST00000539827 FRMPD2Q68DX3 1309 aaPredicted RBP25.79■■□□□ 1.72
HOMER3-204ENST00000539827 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP25.79■■□□□ 1.72
HOMER3-204ENST00000539827 CLRN2A0PK11 232 aa25.79■■□□□ 1.72
HOMER3-204ENST00000539827 ENTPD3O75355 529 aa25.79■■□□□ 1.72
HOMER3-204ENST00000539827 CMA1P23946 247 aa25.79■■□□□ 1.72
HOMER3-204ENST00000539827 ATP2B2Q01814 1243 aa25.79■■□□□ 1.72
HOMER3-204ENST00000539827 TYRO3Q06418 890 aa25.79■■□□□ 1.72
HOMER3-204ENST00000539827 DLGAP5Q15398 846 aa25.79■■□□□ 1.72
HOMER3-204ENST00000539827 SPDYE2BA6NHP3 402 aa25.78■■□□□ 1.72
HOMER3-204ENST00000539827 SPDYE6P0CI01 402 aa25.78■■□□□ 1.72
HOMER3-204ENST00000539827 PDHBP11177 359 aa25.78■■□□□ 1.72
HOMER3-204ENST00000539827 SHROOM1Q2M3G4 852 aaPredicted RBP25.78■■□□□ 1.72
HOMER3-204ENST00000539827 ANP32BQ92688 251 aaKnown RBP25.78■■□□□ 1.72
HOMER3-204ENST00000539827 CCDC17Q96LX7 622 aa25.78■■□□□ 1.72
HOMER3-204ENST00000539827 SPZ1Q9BXG8 430 aa25.78■■□□□ 1.72
HOMER3-204ENST00000539827 TAOK3Q9H2K8 898 aa25.78■■□□□ 1.72
HOMER3-204ENST00000539827 VAT1LQ9HCJ6 419 aa25.78■■□□□ 1.72
HOMER3-204ENST00000539827 TCP10L2B9ZVM9 353 aa25.78■■□□□ 1.72
HOMER3-204ENST00000539827 CXCL9Q07325 125 aa25.78■■□□□ 1.72
HOMER3-204ENST00000539827 CERKLQ49MI3 558 aaPredicted RBP25.78■■□□□ 1.72
HOMER3-204ENST00000539827 WWC2Q6AWC2 1192 aa25.78■■□□□ 1.72
HOMER3-204ENST00000539827 FOXP4Q8IVH2 680 aaPredicted RBP25.78■■□□□ 1.72
HOMER3-204ENST00000539827 UBA5Q9GZZ9 404 aa25.78■■□□□ 1.72
HOMER3-204ENST00000539827 EIF4ENIF1Q9NRA8 985 aaKnown RBP25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms