RNA–Protein interactions for RNA: ENST00000539655.1

AC243972.3-201, humanhuman

BASIC

Gene AC243972.3, Length 198 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC243972.3-201ENST00000539655 NFIBO00712 420 aa5.54□□□□□ -1.52
AC243972.3-201ENST00000539655 PDIA4P13667 645 aaKnown RBP5.54□□□□□ -1.52
AC243972.3-201ENST00000539655 GLDCP23378 1020 aa5.54□□□□□ -1.52
AC243972.3-201ENST00000539655 GBP2P32456 591 aaPredicted RBP5.54□□□□□ -1.52
AC243972.3-201ENST00000539655 REC114Q7Z4M0 266 aa5.54□□□□□ -1.52
AC243972.3-201ENST00000539655 ZSCAN18Q8TBC5 510 aaPredicted RBP5.54□□□□□ -1.52
AC243972.3-201ENST00000539655 DHX38Q92620 1227 aaKnown RBP5.54□□□□□ -1.52
AC243972.3-201ENST00000539655 DIRC2Q96SL1 478 aa5.54□□□□□ -1.52
AC243972.3-201ENST00000539655 LRRC3Q9BY71 257 aa5.54□□□□□ -1.52
AC243972.3-201ENST00000539655 CD320Q9NPF0 282 aa5.54□□□□□ -1.52
AC243972.3-201ENST00000539655 DCP1AQ9NPI6 582 aaPredicted RBP5.54□□□□□ -1.52
AC243972.3-201ENST00000539655 ZNF281Q9Y2X9 895 aa5.54□□□□□ -1.52
AC243972.3-201ENST00000539655 ROBO2Q9HCK4 1378 aa5.54□□□□□ -1.52
AC243972.3-201ENST00000539655 FITM1A5D6W6 292 aa5.53□□□□□ -1.52
AC243972.3-201ENST00000539655 CHURC1-FNTBB4DL54 471 aa5.53□□□□□ -1.52
AC243972.3-201ENST00000539655 LRRN2O75325 713 aa5.53□□□□□ -1.52
AC243972.3-201ENST00000539655 FAM196AQ6ZSG2 479 aa5.53□□□□□ -1.52
AC243972.3-201ENST00000539655 ERMP1Q7Z2K6 904 aa5.53□□□□□ -1.52
AC243972.3-201ENST00000539655 IRF2BP1Q8IU81 584 aa5.53□□□□□ -1.52
AC243972.3-201ENST00000539655 LRRC56Q8IYG6 542 aaPredicted RBP5.53□□□□□ -1.52
AC243972.3-201ENST00000539655 OXR1Q8N573 874 aa5.53□□□□□ -1.52
AC243972.3-201ENST00000539655 BAHD1Q8TBE0 780 aaPredicted RBP5.53□□□□□ -1.52
AC243972.3-201ENST00000539655 SLC26A8Q96RN1 970 aa5.53□□□□□ -1.52
AC243972.3-201ENST00000539655 RNF32Q9H0A6 362 aa5.53□□□□□ -1.52
AC243972.3-201ENST00000539655 MRS2Q9HD23 443 aa5.53□□□□□ -1.52
AC243972.3-201ENST00000539655 VTI1BQ9UEU0 232 aa5.53□□□□□ -1.52
AC243972.3-201ENST00000539655 PCDHA11Q9Y5I1 949 aa5.53□□□□□ -1.52
AC243972.3-201ENST00000539655 F6X3S4 739 aa5.52□□□□□ -1.53
AC243972.3-201ENST00000539655 RGS13O14921 159 aa5.52□□□□□ -1.53
AC243972.3-201ENST00000539655 DNAJA2O60884 412 aa5.52□□□□□ -1.53
AC243972.3-201ENST00000539655 ATE1O95260 518 aa5.52□□□□□ -1.53
AC243972.3-201ENST00000539655 TMEM253P0C7T8 217 aa5.52□□□□□ -1.53
AC243972.3-201ENST00000539655 LTKP29376 864 aa5.52□□□□□ -1.53
AC243972.3-201ENST00000539655 TNNI2P48788 182 aa5.52□□□□□ -1.53
AC243972.3-201ENST00000539655 TEKQ02763 1124 aa5.52□□□□□ -1.53
AC243972.3-201ENST00000539655 CHRNEQ04844 493 aa5.52□□□□□ -1.53
AC243972.3-201ENST00000539655 SNAP47Q5SQN1 464 aa5.52□□□□□ -1.53
AC243972.3-201ENST00000539655 LCNL1Q6ZST4 164 aa5.52□□□□□ -1.53
AC243972.3-201ENST00000539655 AMIGO3Q86WK7 504 aa5.52□□□□□ -1.53
AC243972.3-201ENST00000539655 GOLM1Q8NBJ4 401 aa5.52□□□□□ -1.53
AC243972.3-201ENST00000539655 ENOX1Q8TC92 643 aaKnown RBP5.52□□□□□ -1.53
AC243972.3-201ENST00000539655 KRTAP4-9Q9BYQ8 210 aa5.52□□□□□ -1.53
AC243972.3-201ENST00000539655 SLC6A17Q9H1V8 727 aa5.52□□□□□ -1.53
AC243972.3-201ENST00000539655 CWC22Q9HCG8 908 aaKnown RBP5.52□□□□□ -1.53
AC243972.3-201ENST00000539655 KLHL3Q9UH77 587 aa5.52□□□□□ -1.53
AC243972.3-201ENST00000539655 GRIN3BO60391 1043 aa5.51□□□□□ -1.53
AC243972.3-201ENST00000539655 TAGLNQ01995 201 aaKnown RBP5.51□□□□□ -1.53
AC243972.3-201ENST00000539655 FAM160A1Q05DH4 1040 aa5.51□□□□□ -1.53
AC243972.3-201ENST00000539655 DUSP4Q13115 394 aa5.51□□□□□ -1.53
AC243972.3-201ENST00000539655 SNX17Q15036 470 aa5.51□□□□□ -1.53
AC243972.3-201ENST00000539655 SPPL2CQ8IUH8 684 aa5.51□□□□□ -1.53
AC243972.3-201ENST00000539655 ANKS4BQ8N8V4 417 aa5.51□□□□□ -1.53
AC243972.3-201ENST00000539655 SHISA3A0PJX4 238 aa5.5□□□□□ -1.53
AC243972.3-201ENST00000539655 GREM1O60565 184 aa5.5□□□□□ -1.53
AC243972.3-201ENST00000539655 PEX10O60683 326 aa5.5□□□□□ -1.53
AC243972.3-201ENST00000539655 TRHRP34981 398 aaPredicted RBP5.5□□□□□ -1.53
AC243972.3-201ENST00000539655 RNF4P78317 190 aa5.5□□□□□ -1.53
AC243972.3-201ENST00000539655 MLECQ14165 292 aa5.5□□□□□ -1.53
AC243972.3-201ENST00000539655 KCNA10Q16322 511 aa5.5□□□□□ -1.53
AC243972.3-201ENST00000539655 ATG14Q6ZNE5 492 aa5.5□□□□□ -1.53
AC243972.3-201ENST00000539655 PHACTR4Q8IZ21 702 aa5.5□□□□□ -1.53
AC243972.3-201ENST00000539655 FBXO27Q8NI29 283 aa5.5□□□□□ -1.53
AC243972.3-201ENST00000539655 SYTL5Q8TDW5 730 aaPredicted RBP5.5□□□□□ -1.53
AC243972.3-201ENST00000539655 LINC01599Q8WXQ3 324 aa5.5□□□□□ -1.53
AC243972.3-201ENST00000539655 SYTL4Q96C24 671 aaPredicted RBP5.5□□□□□ -1.53
AC243972.3-201ENST00000539655 KIF2CQ99661 725 aa5.5□□□□□ -1.53
AC243972.3-201ENST00000539655 G6PC3Q9BUM1 346 aa5.5□□□□□ -1.53
AC243972.3-201ENST00000539655 KBTBD4Q9NVX7 518 aa5.5□□□□□ -1.53
AC243972.3-201ENST00000539655 RAPGEFL1Q9UHV5 662 aa5.5□□□□□ -1.53
AC243972.3-201ENST00000539655 YBX2Q9Y2T7 364 aaKnown RBP5.5□□□□□ -1.53
AC243972.3-201ENST00000539655 SLC22A31A6NKX4 558 aa5.49□□□□□ -1.53
AC243972.3-201ENST00000539655 MINDY4BA8MYZ0 360 aa5.49□□□□□ -1.53
AC243972.3-201ENST00000539655 NPIPB6E9PJ23 425 aa5.49□□□□□ -1.53
AC243972.3-201ENST00000539655 ETV2O00321 342 aaPredicted RBP5.49□□□□□ -1.53
AC243972.3-201ENST00000539655 UBOX5O94941 541 aa5.49□□□□□ -1.53
AC243972.3-201ENST00000539655 ZSCAN22P10073 491 aaPredicted RBP5.49□□□□□ -1.53
AC243972.3-201ENST00000539655 GBP1P32455 592 aa5.49□□□□□ -1.53
AC243972.3-201ENST00000539655 CWF19L2Q2TBE0 894 aaKnown RBP5.49□□□□□ -1.53
AC243972.3-201ENST00000539655 TIGD5Q53EQ6 642 aa5.49□□□□□ -1.53
AC243972.3-201ENST00000539655 FBXL19Q6PCT2 694 aa5.49□□□□□ -1.53
AC243972.3-201ENST00000539655 RNF111Q6ZNA4 994 aa5.49□□□□□ -1.53
AC243972.3-201ENST00000539655 INTS4Q96HW7 963 aaKnown RBP5.49□□□□□ -1.53
AC243972.3-201ENST00000539655 HDAC8Q9BY41 377 aa5.49□□□□□ -1.53
AC243972.3-201ENST00000539655 C19orf44Q9H6X5 657 aa5.49□□□□□ -1.53
AC243972.3-201ENST00000539655 EHMT1Q9H9B1 1298 aa5.49□□□□□ -1.53
AC243972.3-201ENST00000539655 KCNK12Q9HB15 430 aa5.49□□□□□ -1.53
AC243972.3-201ENST00000539655 GMIPQ9P107 970 aa5.49□□□□□ -1.53
AC243972.3-201ENST00000539655 SUPT16HQ9Y5B9 1047 aaKnown RBP5.49□□□□□ -1.53
AC243972.3-201ENST00000539655 TCAF2A6NFQ2 919 aa5.48□□□□□ -1.53
AC243972.3-201ENST00000539655 SEMA7AO75326 666 aa5.48□□□□□ -1.53
AC243972.3-201ENST00000539655 CLEC16AQ2KHT3 1053 aa5.48□□□□□ -1.53
AC243972.3-201ENST00000539655 CCDC27Q2M243 656 aa5.48□□□□□ -1.53
AC243972.3-201ENST00000539655 CDCP2Q5VXM1 449 aa5.48□□□□□ -1.53
AC243972.3-201ENST00000539655 DAGLBQ8NCG7 672 aa5.48□□□□□ -1.53
AC243972.3-201ENST00000539655 SHISA4Q96DD7 197 aa5.48□□□□□ -1.53
AC243972.3-201ENST00000539655 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.48□□□□□ -1.53
AC243972.3-201ENST00000539655 EBF1Q9UH73 591 aa5.48□□□□□ -1.53
AC243972.3-201ENST00000539655 SMG5Q9UPR3 1016 aaKnown RBP5.48□□□□□ -1.53
AC243972.3-201ENST00000539655 EIF4A3P38919 411 aaKnown RBP5.47□□□□□ -1.53
AC243972.3-201ENST00000539655 CCNFP41002 786 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms