RNA–Protein interactions for RNA: ENST00000539204.5

YBX3-207, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 649 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-207ENST00000539204 HDAC5Q9UQL6 1122 aa14.82□□□□□ -0.04
YBX3-207ENST00000539204 SPDYE16A6NNV3 312 aaPredicted RBP14.81□□□□□ -0.04
YBX3-207ENST00000539204 GRXCR1A8MXD5 290 aa14.81□□□□□ -0.04
YBX3-207ENST00000539204 COBLO75128 1261 aa14.81□□□□□ -0.04
YBX3-207ENST00000539204 PPP4CP60510 307 aa14.81□□□□□ -0.04
YBX3-207ENST00000539204 RAB3GAP1Q15042 981 aa14.81□□□□□ -0.04
YBX3-207ENST00000539204 PI16Q6UXB8 463 aa14.81□□□□□ -0.04
YBX3-207ENST00000539204 NECAB3Q96P71 396 aaPredicted RBP14.81□□□□□ -0.04
YBX3-207ENST00000539204 MOV10L1Q9BXT6 1211 aaKnown RBP14.81□□□□□ -0.04
YBX3-207ENST00000539204 KIAA1683Q9H0B3 1180 aa14.81□□□□□ -0.04
YBX3-207ENST00000539204 CXXC1Q9P0U4 656 aaPredicted RBP14.81□□□□□ -0.04
YBX3-207ENST00000539204 MSRAQ9UJ68 235 aa14.81□□□□□ -0.04
YBX3-207ENST00000539204 XIRP2A4UGR9 3374 aa14.81□□□□□ -0.04
YBX3-207ENST00000539204 ERCC3P19447 782 aa14.8□□□□□ -0.04
YBX3-207ENST00000539204 TFCP2Q12800 502 aa14.8□□□□□ -0.04
YBX3-207ENST00000539204 PPIGQ13427 754 aaKnown RBP eCLIP14.8□□□□□ -0.043e-7■■□□□ 13.5
YBX3-207ENST00000539204 COG2Q14746 738 aa14.8□□□□□ -0.04
YBX3-207ENST00000539204 AAK1Q2M2I8 961 aa14.8□□□□□ -0.04
YBX3-207ENST00000539204 NAA16Q6N069 864 aaPredicted RBP14.8□□□□□ -0.04
YBX3-207ENST00000539204 MFSD5Q6N075 450 aa14.8□□□□□ -0.04
YBX3-207ENST00000539204 ANKRD33Q7Z3H0 272 aa14.8□□□□□ -0.04
YBX3-207ENST00000539204 RPAP3Q9H6T3 665 aaPredicted RBP14.8□□□□□ -0.04
YBX3-207ENST00000539204 SAP30BPQ9UHR5 308 aaKnown RBP14.8□□□□□ -0.04
YBX3-207ENST00000539204 FLT1P17948 1338 aa14.8□□□□□ -0.04
YBX3-207ENST00000539204 A0A1W2PQ45 241 aaPredicted RBP14.79□□□□□ -0.04
YBX3-207ENST00000539204 A0A1W2PQY0 241 aa14.79□□□□□ -0.04
YBX3-207ENST00000539204 PGK1P00558 417 aa14.79□□□□□ -0.04
YBX3-207ENST00000539204 TMEM240Q5SV17 173 aa14.79□□□□□ -0.04
YBX3-207ENST00000539204 TATDN1Q6P1N9 297 aa14.79□□□□□ -0.04
YBX3-207ENST00000539204 C16orf59Q7L2K0 433 aa14.79□□□□□ -0.04
YBX3-207ENST00000539204 SHCBP1Q8NEM2 672 aa14.79□□□□□ -0.04
YBX3-207ENST00000539204 NUP133Q8WUM0 1156 aa14.79□□□□□ -0.04
YBX3-207ENST00000539204 SPATC1LQ9H0A9 340 aa14.79□□□□□ -0.04
YBX3-207ENST00000539204 MROH8Q9H579 483 aa14.79□□□□□ -0.04
YBX3-207ENST00000539204 NRBP1Q9UHY1 535 aa14.79□□□□□ -0.04
YBX3-207ENST00000539204 RAB30Q15771 203 aa14.78□□□□□ -0.04
YBX3-207ENST00000539204 TMEM31Q5JXX7 168 aa14.78□□□□□ -0.04
YBX3-207ENST00000539204 RASIP1Q5U651 963 aa14.78□□□□□ -0.04
YBX3-207ENST00000539204 ABRAQ8N0Z2 381 aa14.78□□□□□ -0.04
YBX3-207ENST00000539204 ACER1Q8TDN7 264 aa14.78□□□□□ -0.04
YBX3-207ENST00000539204 MAML3Q96JK9 1138 aa14.78□□□□□ -0.04
YBX3-207ENST00000539204 EPHX3Q9H6B9 360 aa14.78□□□□□ -0.04
YBX3-207ENST00000539204 SLC28A3Q9HAS3 691 aa14.78□□□□□ -0.04
YBX3-207ENST00000539204 CABP5Q9NP86 173 aa14.78□□□□□ -0.04
YBX3-207ENST00000539204 STARD7Q9NQZ5 370 aa14.78□□□□□ -0.04
YBX3-207ENST00000539204 ARID4AP29374 1257 aaPredicted RBP14.77□□□□□ -0.05
YBX3-207ENST00000539204 PLS1Q14651 629 aa14.77□□□□□ -0.05
YBX3-207ENST00000539204 ABCB5Q2M3G0 1257 aa14.77□□□□□ -0.05
YBX3-207ENST00000539204 CERKLQ49MI3 558 aaPredicted RBP14.77□□□□□ -0.05
YBX3-207ENST00000539204 ZNF365Q70YC5 407 aa14.77□□□□□ -0.05
YBX3-207ENST00000539204 NCAPG2Q86XI2 1143 aa14.77□□□□□ -0.05
YBX3-207ENST00000539204 TMEM199Q8N511 208 aa14.77□□□□□ -0.05
YBX3-207ENST00000539204 SSH1Q8WYL5 1049 aa14.77□□□□□ -0.05
YBX3-207ENST00000539204 TSEN34Q9BSV6 310 aaKnown RBP14.77□□□□□ -0.05
YBX3-207ENST00000539204 PIEZO1Q92508 2521 aa14.76□□□□□ -0.05
YBX3-207ENST00000539204 UQCRFS1P1P0C7P4 283 aa14.76□□□□□ -0.05
YBX3-207ENST00000539204 FCER1AP12319 257 aa14.76□□□□□ -0.05
YBX3-207ENST00000539204 MCAMP43121 646 aa14.76□□□□□ -0.05
YBX3-207ENST00000539204 TFF2Q03403 129 aa14.76□□□□□ -0.05
YBX3-207ENST00000539204 PSRC1Q6PGN9 363 aaPredicted RBP14.76□□□□□ -0.05
YBX3-207ENST00000539204 TCF20Q9UGU0 1960 aaKnown RBP14.76□□□□□ -0.05
YBX3-207ENST00000539204 CHD9Q3L8U1 2897 aa14.75□□□□□ -0.05
YBX3-207ENST00000539204 ACRP10323 421 aa14.75□□□□□ -0.05
YBX3-207ENST00000539204 CSF2RAP15509 400 aa14.75□□□□□ -0.05
YBX3-207ENST00000539204 ACLYP53396 1101 aa14.75□□□□□ -0.05
YBX3-207ENST00000539204 ALYREFQ86V81 257 aaKnown RBP14.75□□□□□ -0.05
YBX3-207ENST00000539204 MB21D1Q8N884 522 aa14.75□□□□□ -0.05
YBX3-207ENST00000539204 HERVK_113Q902F9 699 aa14.75□□□□□ -0.05
YBX3-207ENST00000539204 NKX2-4Q9H2Z4 354 aa14.75□□□□□ -0.05
YBX3-207ENST00000539204 SERPINB13Q9UIV8 391 aa14.75□□□□□ -0.05
YBX3-207ENST00000539204 TBX21Q9UL17 535 aa14.75□□□□□ -0.05
YBX3-207ENST00000539204 SMCHD1A6NHR9 2005 aa14.75□□□□□ -0.05
YBX3-207ENST00000539204 MROH7Q68CQ1 1323 aa14.74□□□□□ -0.05
YBX3-207ENST00000539204 SIPA1L1O43166 1804 aa14.74□□□□□ -0.05
YBX3-207ENST00000539204 MOXD2PA6NHM9 499 aa14.74□□□□□ -0.05
YBX3-207ENST00000539204 AKR1A1P14550 325 aa14.74□□□□□ -0.05
YBX3-207ENST00000539204 KCNQ1P51787 676 aa14.74□□□□□ -0.05
YBX3-207ENST00000539204 SKIV2LQ15477 1246 aaKnown RBP14.74□□□□□ -0.05
YBX3-207ENST00000539204 ADGRA1Q86SQ6 560 aa14.74□□□□□ -0.05
YBX3-207ENST00000539204 MICALL1Q8N3F8 863 aa14.74□□□□□ -0.05
YBX3-207ENST00000539204 TINF2Q9BSI4 451 aa14.74□□□□□ -0.05
YBX3-207ENST00000539204 TANGO6Q9C0B7 1094 aa14.74□□□□□ -0.05
YBX3-207ENST00000539204 MTIF3Q9H2K0 278 aaKnown RBP14.74□□□□□ -0.05
YBX3-207ENST00000539204 PLXNA1Q9UIW2 1896 aa14.74□□□□□ -0.05
YBX3-207ENST00000539204 APBB1O00213 710 aa14.73□□□□□ -0.05
YBX3-207ENST00000539204 ERC2O15083 957 aa14.73□□□□□ -0.05
YBX3-207ENST00000539204 SRGAP3O43295 1099 aa14.73□□□□□ -0.05
YBX3-207ENST00000539204 GPR37L1O60883 481 aa14.73□□□□□ -0.05
YBX3-207ENST00000539204 ADAMTS4O75173 837 aa14.73□□□□□ -0.05
YBX3-207ENST00000539204 DSG3P32926 999 aa14.73□□□□□ -0.05
YBX3-207ENST00000539204 KCNA10Q16322 511 aa14.73□□□□□ -0.05
YBX3-207ENST00000539204 TTC6Q86TZ1 520 aa14.73□□□□□ -0.05
YBX3-207ENST00000539204 VTI1AQ96AJ9 217 aa14.73□□□□□ -0.05
YBX3-207ENST00000539204 EHD4Q9H223 541 aa14.73□□□□□ -0.05
YBX3-207ENST00000539204 MRS2Q9HD23 443 aa14.73□□□□□ -0.05
YBX3-207ENST00000539204 SNRKQ9NRH2 765 aa14.73□□□□□ -0.05
YBX3-207ENST00000539204 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.73□□□□□ -0.05
YBX3-207ENST00000539204 ELP1O95163 1332 aa14.72□□□□□ -0.05
YBX3-207ENST00000539204 IGSF3O75054 1194 aa14.72□□□□□ -0.05
YBX3-207ENST00000539204 SLC25A27O95847 323 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms