RNA–Protein interactions for RNA: ENST00000538923.1

MRE11-208, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 5

Gene MRE11, Length 558 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-208ENST00000538923 SLURP2P0DP57 97 aa10.95□□□□□ -0.66
MRE11-208ENST00000538923 GCLCP48506 637 aaPredicted RBP10.95□□□□□ -0.66
MRE11-208ENST00000538923 TREML2Q5T2D2 321 aa10.95□□□□□ -0.66
MRE11-208ENST00000538923 CCDC84Q86UT8 332 aaPredicted RBP10.95□□□□□ -0.66
MRE11-208ENST00000538923 SPATA5Q8NB90 893 aa10.95□□□□□ -0.66
MRE11-208ENST00000538923 ZNF280CQ8ND82 737 aa10.95□□□□□ -0.66
MRE11-208ENST00000538923 ARHGAP45Q92619 1136 aa10.95□□□□□ -0.66
MRE11-208ENST00000538923 SYMPKQ92797 1274 aaKnown RBP10.95□□□□□ -0.66
MRE11-208ENST00000538923 NEUROD6Q96NK8 337 aa10.95□□□□□ -0.66
MRE11-208ENST00000538923 PRO3102Q9H379 93 aa10.95□□□□□ -0.66
MRE11-208ENST00000538923 HMG20BQ9P0W2 317 aa10.95□□□□□ -0.66
MRE11-208ENST00000538923 PCDHB15Q9Y5E8 787 aa10.95□□□□□ -0.66
MRE11-208ENST00000538923 FAM196BA6NMK8 535 aa10.94□□□□□ -0.66
MRE11-208ENST00000538923 USP17L5A8MUK1 530 aa10.94□□□□□ -0.66
MRE11-208ENST00000538923 ARID4AP29374 1257 aaPredicted RBP10.94□□□□□ -0.66
MRE11-208ENST00000538923 RARSP54136 660 aaKnown RBP10.94□□□□□ -0.66
MRE11-208ENST00000538923 SPP2Q13103 211 aa10.94□□□□□ -0.66
MRE11-208ENST00000538923 ZNF384Q8TF68 577 aa10.94□□□□□ -0.66
MRE11-208ENST00000538923 NSUN4Q96CB9 384 aaKnown RBP10.94□□□□□ -0.66
MRE11-208ENST00000538923 USB1Q9BQ65 265 aaKnown RBP10.94□□□□□ -0.66
MRE11-208ENST00000538923 NOL10Q9BSC4 688 aaKnown RBP10.94□□□□□ -0.66
MRE11-208ENST00000538923 AS3MTQ9HBK9 375 aa10.94□□□□□ -0.66
MRE11-208ENST00000538923 RAI14Q9P0K7 980 aa10.94□□□□□ -0.66
MRE11-208ENST00000538923 HERC5Q9UII4 1024 aaKnown RBP10.94□□□□□ -0.66
MRE11-208ENST00000538923 HMGCRP04035 888 aa10.93□□□□□ -0.66
MRE11-208ENST00000538923 GGCXP38435 758 aa10.93□□□□□ -0.66
MRE11-208ENST00000538923 CAP2P40123 477 aa10.93□□□□□ -0.66
MRE11-208ENST00000538923 HMGCS2P54868 508 aa10.93□□□□□ -0.66
MRE11-208ENST00000538923 MTMR2Q13614 643 aa10.93□□□□□ -0.66
MRE11-208ENST00000538923 PI16Q6UXB8 463 aa10.93□□□□□ -0.66
MRE11-208ENST00000538923 TBC1D9Q6ZT07 1266 aa10.93□□□□□ -0.66
MRE11-208ENST00000538923 NECAB2Q7Z6G3 386 aa10.93□□□□□ -0.66
MRE11-208ENST00000538923 ANKLE1Q8NAG6 615 aa10.93□□□□□ -0.66
MRE11-208ENST00000538923 SLC6A16Q9GZN6 736 aa10.93□□□□□ -0.66
MRE11-208ENST00000538923 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.93□□□□□ -0.66
MRE11-208ENST00000538923 DHX36Q9H2U1 1008 aaKnown RBP10.93□□□□□ -0.66
MRE11-208ENST00000538923 LRP2BPQ9P2M1 347 aa10.93□□□□□ -0.66
MRE11-208ENST00000538923 MYH13Q9UKX3 1938 aa10.93□□□□□ -0.66
MRE11-208ENST00000538923 DOCK2Q92608 1830 aa10.93□□□□□ -0.66
MRE11-208ENST00000538923 IPO8O15397 1037 aaKnown RBP10.92□□□□□ -0.66
MRE11-208ENST00000538923 S1PR4O95977 384 aa10.92□□□□□ -0.66
MRE11-208ENST00000538923 GNAI2P04899 355 aa10.92□□□□□ -0.66
MRE11-208ENST00000538923 UQCRFS1P1P0C7P4 283 aa10.92□□□□□ -0.66
MRE11-208ENST00000538923 RETREG3Q86VR2 466 aa10.92□□□□□ -0.66
MRE11-208ENST00000538923 TEX11Q8IYF3 940 aa10.92□□□□□ -0.66
MRE11-208ENST00000538923 PAWRQ96IZ0 340 aaKnown RBP10.92□□□□□ -0.66
MRE11-208ENST00000538923 PCMTD1Q96MG8 357 aaPredicted RBP10.92□□□□□ -0.66
MRE11-208ENST00000538923 ASCC2Q9H1I8 757 aaPredicted RBP10.92□□□□□ -0.66
MRE11-208ENST00000538923 PI4KBQ9UBF8 816 aa10.92□□□□□ -0.66
MRE11-208ENST00000538923 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.92□□□□□ -0.66
MRE11-208ENST00000538923 KIAA0100Q14667 2235 aaKnown RBP10.92□□□□□ -0.66
MRE11-208ENST00000538923 RPTORQ8N122 1335 aa10.91□□□□□ -0.66
MRE11-208ENST00000538923 BAG3O95817 575 aa10.91□□□□□ -0.66
MRE11-208ENST00000538923 ASNSP08243 561 aa10.91□□□□□ -0.66
MRE11-208ENST00000538923 MCAMP43121 646 aa10.91□□□□□ -0.66
MRE11-208ENST00000538923 IRX3P78415 501 aaPredicted RBP10.91□□□□□ -0.66
MRE11-208ENST00000538923 G3BP1Q13283 466 aaKnown RBP eCLIP10.91□□□□□ -0.66
MRE11-208ENST00000538923 SH3RF3Q8TEJ3 882 aaPredicted RBP10.91□□□□□ -0.66
MRE11-208ENST00000538923 WDR18Q9BV38 432 aa10.91□□□□□ -0.66
MRE11-208ENST00000538923 GOPCQ9HD26 462 aa10.91□□□□□ -0.66
MRE11-208ENST00000538923 HMX1Q9NP08 348 aaPredicted RBP10.91□□□□□ -0.66
MRE11-208ENST00000538923 TMOD4Q9NZQ9 345 aa10.91□□□□□ -0.66
MRE11-208ENST00000538923 MORF4L1Q9UBU8 362 aa10.91□□□□□ -0.66
MRE11-208ENST00000538923 DOCK1Q14185 1865 aa10.91□□□□□ -0.66
MRE11-208ENST00000538923 RANBP2P49792 3224 aaKnown RBP10.9□□□□□ -0.66
MRE11-208ENST00000538923 IGSF3O75054 1194 aa10.9□□□□□ -0.66
MRE11-208ENST00000538923 QPCTQ16769 361 aa10.9□□□□□ -0.66
MRE11-208ENST00000538923 TUSC1Q2TAM9 212 aa10.9□□□□□ -0.66
MRE11-208ENST00000538923 MSS51Q4VC12 460 aa10.9□□□□□ -0.66
MRE11-208ENST00000538923 NAA16Q6N069 864 aaPredicted RBP10.9□□□□□ -0.66
MRE11-208ENST00000538923 PPP1R18Q6NYC8 613 aa10.9□□□□□ -0.66
MRE11-208ENST00000538923 FAM160A2Q8N612 972 aaPredicted RBP10.9□□□□□ -0.66
MRE11-208ENST00000538923 DIS3LQ8TF46 1054 aaKnown RBP10.9□□□□□ -0.66
MRE11-208ENST00000538923 SOCS4Q8WXH5 440 aa10.9□□□□□ -0.66
MRE11-208ENST00000538923 TRIM34Q9BYJ4 488 aa10.9□□□□□ -0.66
MRE11-208ENST00000538923 GINM1Q9NU53 330 aa10.9□□□□□ -0.66
MRE11-208ENST00000538923 STAP2Q9UGK3 403 aa10.9□□□□□ -0.66
MRE11-208ENST00000538923 GJD2Q9UKL4 321 aa10.9□□□□□ -0.66
MRE11-208ENST00000538923 PNMA6EA0A0J9YXQ4 647 aa10.89□□□□□ -0.67
MRE11-208ENST00000538923 C19orf81C9J6K1 198 aa10.89□□□□□ -0.67
MRE11-208ENST00000538923 TRIM27P14373 513 aa10.89□□□□□ -0.67
MRE11-208ENST00000538923 HOXA7P31268 230 aaPredicted RBP10.89□□□□□ -0.67
MRE11-208ENST00000538923 BACE1P56817 501 aa10.89□□□□□ -0.67
MRE11-208ENST00000538923 RRP1BQ14684 758 aaKnown RBP10.89□□□□□ -0.67
MRE11-208ENST00000538923 CCDC158Q5M9N0 1113 aa10.89□□□□□ -0.67
MRE11-208ENST00000538923 TTC39AQ5SRH9 613 aa10.89□□□□□ -0.67
MRE11-208ENST00000538923 METTL16Q86W50 562 aaKnown RBP10.89□□□□□ -0.67
MRE11-208ENST00000538923 TRMT44Q8IYL2 757 aaKnown RBP10.89□□□□□ -0.67
MRE11-208ENST00000538923 C7orf61Q8IZ16 206 aa10.89□□□□□ -0.67
MRE11-208ENST00000538923 CRACR2BQ8N4Y2 399 aaPredicted RBP10.89□□□□□ -0.67
MRE11-208ENST00000538923 GPRC5AQ8NFJ5 357 aa10.89□□□□□ -0.67
MRE11-208ENST00000538923 GPR108Q9NPR9 543 aa10.89□□□□□ -0.67
MRE11-208ENST00000538923 PRDM9Q9NQV7 894 aa10.89□□□□□ -0.67
MRE11-208ENST00000538923 AATFQ9NY61 560 aaKnown RBP eCLIP10.89□□□□□ -0.67
MRE11-208ENST00000538923 SZT2Q5T011 3432 aa10.89□□□□□ -0.67
MRE11-208ENST00000538923 FLT1P17948 1338 aa10.88□□□□□ -0.67
MRE11-208ENST00000538923 USP17L10C9JJH3 530 aa10.88□□□□□ -0.67
MRE11-208ENST00000538923 XRCC5P13010 732 aaKnown RBP10.88□□□□□ -0.67
MRE11-208ENST00000538923 MAPK4P31152 587 aa10.88□□□□□ -0.67
MRE11-208ENST00000538923 BMP8BP34820 402 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms