RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 ROBO3Q96MS0 1386 aa17.93■□□□□ 0.46
RAB40B-202ENST00000538809 MINDY4BA8MYZ0 360 aa17.93■□□□□ 0.46
RAB40B-202ENST00000538809 HMGCRP04035 888 aa17.93■□□□□ 0.46
RAB40B-202ENST00000538809 MAPK4P31152 587 aa17.93■□□□□ 0.46
RAB40B-202ENST00000538809 ATP2B2Q01814 1243 aa17.93■□□□□ 0.46
RAB40B-202ENST00000538809 GPR142Q7Z601 462 aa17.93■□□□□ 0.46
RAB40B-202ENST00000538809 SIAH1Q8IUQ4 282 aa17.93■□□□□ 0.46
RAB40B-202ENST00000538809 SPICE1Q8N0Z3 855 aa17.93■□□□□ 0.46
RAB40B-202ENST00000538809 NKX2-3Q8TAU0 364 aa17.93■□□□□ 0.46
RAB40B-202ENST00000538809 TRIB2Q92519 343 aa17.93■□□□□ 0.46
RAB40B-202ENST00000538809 CCDC17Q96LX7 622 aa17.93■□□□□ 0.46
RAB40B-202ENST00000538809 NUDT12Q9BQG2 462 aa17.93■□□□□ 0.46
RAB40B-202ENST00000538809 CWC22Q9HCG8 908 aaKnown RBP17.93■□□□□ 0.46
RAB40B-202ENST00000538809 BTBD7Q9P203 1132 aa17.93■□□□□ 0.46
RAB40B-202ENST00000538809 STAP2Q9UGK3 403 aa17.93■□□□□ 0.46
RAB40B-202ENST00000538809 TDO2P48775 406 aa17.92■□□□□ 0.46
RAB40B-202ENST00000538809 SBK1Q52WX2 424 aa17.92■□□□□ 0.46
RAB40B-202ENST00000538809 WDR78Q5VTH9 848 aa17.92■□□□□ 0.46
RAB40B-202ENST00000538809 PLEKHH3Q7Z736 793 aa17.92■□□□□ 0.46
RAB40B-202ENST00000538809 SOCS4Q8WXH5 440 aa17.92■□□□□ 0.46
RAB40B-202ENST00000538809 DEFB118Q96PH6 123 aa17.92■□□□□ 0.46
RAB40B-202ENST00000538809 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.92■□□□□ 0.46
RAB40B-202ENST00000538809 SUPT16HQ9Y5B9 1047 aaKnown RBP17.92■□□□□ 0.46
RAB40B-202ENST00000538809 APPP05067 770 aa17.91■□□□□ 0.46
RAB40B-202ENST00000538809 LRRFIP1Q32MZ4 808 aaKnown RBP17.91■□□□□ 0.46
RAB40B-202ENST00000538809 SAMD1Q6SPF0 538 aaPredicted RBP17.91■□□□□ 0.46
RAB40B-202ENST00000538809 LBX2Q6XYB7 198 aa17.91■□□□□ 0.46
RAB40B-202ENST00000538809 SH2D4AQ9H788 454 aa17.91■□□□□ 0.46
RAB40B-202ENST00000538809 VCPKMTQ9H867 229 aa17.91■□□□□ 0.46
RAB40B-202ENST00000538809 PAK6Q9NQU5 681 aaPredicted RBP17.91■□□□□ 0.46
RAB40B-202ENST00000538809 TMX2Q9Y320 296 aa17.91■□□□□ 0.46
RAB40B-202ENST00000538809 FARP2O94887 1054 aaPredicted RBP17.9■□□□□ 0.46
RAB40B-202ENST00000538809 SGPL1O95470 568 aa17.9■□□□□ 0.46
RAB40B-202ENST00000538809 IGHDP01880 384 aa17.9■□□□□ 0.46
RAB40B-202ENST00000538809 EEF2P13639 858 aaKnown RBP17.9■□□□□ 0.46
RAB40B-202ENST00000538809 GNAT2P19087 354 aa17.9■□□□□ 0.46
RAB40B-202ENST00000538809 RASA1P20936 1047 aa17.9■□□□□ 0.46
RAB40B-202ENST00000538809 PDE1AP54750 535 aa17.9■□□□□ 0.46
RAB40B-202ENST00000538809 CCNA1P78396 465 aa17.9■□□□□ 0.46
RAB40B-202ENST00000538809 ZMYM1Q5SVZ6 1142 aa17.9■□□□□ 0.46
RAB40B-202ENST00000538809 GIMAP6Q6P9H5 292 aa17.9■□□□□ 0.46
RAB40B-202ENST00000538809 RAD21O60216 631 aa17.89■□□□□ 0.45
RAB40B-202ENST00000538809 FLOT1O75955 427 aa17.89■□□□□ 0.45
RAB40B-202ENST00000538809 RGS2P41220 211 aa17.89■□□□□ 0.45
RAB40B-202ENST00000538809 COG2Q14746 738 aa17.89■□□□□ 0.45
RAB40B-202ENST00000538809 CCL14Q16627 93 aa17.89■□□□□ 0.45
RAB40B-202ENST00000538809 MORN1Q5T089 497 aa17.89■□□□□ 0.45
RAB40B-202ENST00000538809 CCDC129Q6ZRS4 1044 aa17.89■□□□□ 0.45
RAB40B-202ENST00000538809 UBE2Q1Q7Z7E8 422 aa17.89■□□□□ 0.45
RAB40B-202ENST00000538809 LPAR1Q92633 364 aa17.89■□□□□ 0.45
RAB40B-202ENST00000538809 USP6NLQ92738 828 aa17.89■□□□□ 0.45
RAB40B-202ENST00000538809 APBA2Q99767 749 aa17.89■□□□□ 0.45
RAB40B-202ENST00000538809 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.89■□□□□ 0.45
RAB40B-202ENST00000538809 LNPKQ9C0E8 428 aa17.89■□□□□ 0.45
RAB40B-202ENST00000538809 RWDD1Q9H446 243 aaPredicted RBP17.89■□□□□ 0.45
RAB40B-202ENST00000538809 MKNK2Q9HBH9 465 aa17.89■□□□□ 0.45
RAB40B-202ENST00000538809 WDR46O15213 610 aaKnown RBP17.88■□□□□ 0.45
RAB40B-202ENST00000538809 PRDM1O75626 825 aa17.88■□□□□ 0.45
RAB40B-202ENST00000538809 TFRCP02786 760 aaKnown RBP17.88■□□□□ 0.45
RAB40B-202ENST00000538809 ZKSCAN1P17029 563 aaPredicted RBP17.88■□□□□ 0.45
RAB40B-202ENST00000538809 IFNL3Q8IZI9 196 aa17.88■□□□□ 0.45
RAB40B-202ENST00000538809 ATG4CQ96DT6 458 aa17.88■□□□□ 0.45
RAB40B-202ENST00000538809 KANSL2Q9H9L4 492 aa17.88■□□□□ 0.45
RAB40B-202ENST00000538809 LAMA4Q16363 1823 aa17.88■□□□□ 0.45
RAB40B-202ENST00000538809 PATL2C9JE40 543 aaKnown RBP17.87■□□□□ 0.45
RAB40B-202ENST00000538809 XRCC5P13010 732 aaKnown RBP17.87■□□□□ 0.45
RAB40B-202ENST00000538809 PRKAR2AP13861 404 aaKnown RBP17.87■□□□□ 0.45
RAB40B-202ENST00000538809 MAP2K5Q13163 448 aa17.87■□□□□ 0.45
RAB40B-202ENST00000538809 B4GALNT3Q6L9W6 998 aa17.87■□□□□ 0.45
RAB40B-202ENST00000538809 MOV10L1Q9BXT6 1211 aaKnown RBP17.87■□□□□ 0.45
RAB40B-202ENST00000538809 HMX1Q9NP08 348 aaPredicted RBP17.87■□□□□ 0.45
RAB40B-202ENST00000538809 RPTORQ8N122 1335 aa17.87■□□□□ 0.45
RAB40B-202ENST00000538809 PTPREP23469 700 aa17.86■□□□□ 0.45
RAB40B-202ENST00000538809 DSG3P32926 999 aa17.86■□□□□ 0.45
RAB40B-202ENST00000538809 PLS1Q14651 629 aa17.86■□□□□ 0.45
RAB40B-202ENST00000538809 DIS3LQ8TF46 1054 aaKnown RBP17.86■□□□□ 0.45
RAB40B-202ENST00000538809 SPATC1LQ9H0A9 340 aa17.86■□□□□ 0.45
RAB40B-202ENST00000538809 CRISPLD2Q9H0B8 497 aa17.86■□□□□ 0.45
RAB40B-202ENST00000538809 NAPBQ9H115 298 aa17.86■□□□□ 0.45
RAB40B-202ENST00000538809 GOPCQ9HD26 462 aa17.86■□□□□ 0.45
RAB40B-202ENST00000538809 FBXO28Q9NVF7 368 aa17.86■□□□□ 0.45
RAB40B-202ENST00000538809 HOXC10Q9NYD6 342 aa17.86■□□□□ 0.45
RAB40B-202ENST00000538809 IVNS1ABPQ9Y6Y0 642 aa17.86■□□□□ 0.45
RAB40B-202ENST00000538809 SLC15A5A6NIM6 579 aa17.85■□□□□ 0.45
RAB40B-202ENST00000538809 MCM3APO60318 1980 aa17.85■□□□□ 0.45
RAB40B-202ENST00000538809 NUCB1Q02818 461 aa17.85■□□□□ 0.45
RAB40B-202ENST00000538809 CACNB2Q08289 660 aaPredicted RBP17.85■□□□□ 0.45
RAB40B-202ENST00000538809 GRB14Q14449 540 aa17.85■□□□□ 0.45
RAB40B-202ENST00000538809 FAM83BQ5T0W9 1011 aa17.85■□□□□ 0.45
RAB40B-202ENST00000538809 MAP3K21Q5TCX8 1036 aa17.85■□□□□ 0.45
RAB40B-202ENST00000538809 DPF3Q92784 378 aa17.85■□□□□ 0.45
RAB40B-202ENST00000538809 EVI5LQ96CN4 794 aa17.85■□□□□ 0.45
RAB40B-202ENST00000538809 NUP88Q99567 741 aaPredicted RBP17.85■□□□□ 0.45
RAB40B-202ENST00000538809 NACAP1Q9BZK3 213 aa17.85■□□□□ 0.45
RAB40B-202ENST00000538809 FLRT1Q9NZU1 646 aa17.85■□□□□ 0.45
RAB40B-202ENST00000538809 FOXP2O15409 715 aa17.84■□□□□ 0.45
RAB40B-202ENST00000538809 CCND3P30281 292 aaPredicted RBP17.84■□□□□ 0.45
RAB40B-202ENST00000538809 PPARAQ07869 468 aa17.84■□□□□ 0.45
RAB40B-202ENST00000538809 CHD1LQ86WJ1 897 aa17.84■□□□□ 0.45
RAB40B-202ENST00000538809 TRMT44Q8IYL2 757 aaKnown RBP17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms