RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 HSD3B7Q9H2F3 369 aa10.62□□□□□ -0.71
DDB1-211ENST00000538280 TAF1DQ9H5J8 278 aaPredicted RBP10.62□□□□□ -0.71
DDB1-211ENST00000538280 DCP1AQ9NPI6 582 aaPredicted RBP10.62□□□□□ -0.71
DDB1-211ENST00000538280 TOMM22Q9NS69 142 aa10.62□□□□□ -0.71
DDB1-211ENST00000538280 ARPP21Q9UBL0 812 aaPredicted RBP10.62□□□□□ -0.71
DDB1-211ENST00000538280 SRPRBQ9Y5M8 271 aaKnown RBP10.62□□□□□ -0.71
DDB1-211ENST00000538280 CYP2D7A0A087X1C5 515 aa10.61□□□□□ -0.71
DDB1-211ENST00000538280 ITGBL1O95965 494 aaPredicted RBP10.61□□□□□ -0.71
DDB1-211ENST00000538280 GTF2E1P29083 439 aaPredicted RBP10.61□□□□□ -0.71
DDB1-211ENST00000538280 KCNJ6P48051 423 aa10.61□□□□□ -0.71
DDB1-211ENST00000538280 SARSP49591 514 aaKnown RBP10.61□□□□□ -0.71
DDB1-211ENST00000538280 GSDMDP57764 484 aa10.61□□□□□ -0.71
DDB1-211ENST00000538280 FMR1Q06787 632 aaKnown RBP eCLIP10.61□□□□□ -0.713e-8■■■■■ 34.9
DDB1-211ENST00000538280 DHX8Q14562 1220 aaKnown RBP10.61□□□□□ -0.71
DDB1-211ENST00000538280 NPY5RQ15761 445 aa10.61□□□□□ -0.71
DDB1-211ENST00000538280 NT5DC1Q5TFE4 455 aa10.61□□□□□ -0.71
DDB1-211ENST00000538280 STYK1Q6J9G0 422 aa10.61□□□□□ -0.71
DDB1-211ENST00000538280 CATIPQ7Z7H3 387 aa10.61□□□□□ -0.71
DDB1-211ENST00000538280 IQCA1Q86XH1 822 aa10.61□□□□□ -0.71
DDB1-211ENST00000538280 OXER1Q8TDS5 423 aa10.61□□□□□ -0.71
DDB1-211ENST00000538280 NUP133Q8WUM0 1156 aa10.61□□□□□ -0.71
DDB1-211ENST00000538280 L3MBTL3Q96JM7 780 aaPredicted RBP10.61□□□□□ -0.71
DDB1-211ENST00000538280 ZNF277Q9NRM2 450 aaPredicted RBP10.61□□□□□ -0.71
DDB1-211ENST00000538280 KCNH3Q9ULD8 1083 aa10.61□□□□□ -0.71
DDB1-211ENST00000538280 CEP131Q9UPN4 1083 aa10.61□□□□□ -0.71
DDB1-211ENST00000538280 LEMD3Q9Y2U8 911 aa10.61□□□□□ -0.71
DDB1-211ENST00000538280 TRPM7Q96QT4 1865 aa10.61□□□□□ -0.71
DDB1-211ENST00000538280 USP17L12C9JPN9 530 aa10.6□□□□□ -0.71
DDB1-211ENST00000538280 USP17L21D6R901 530 aa10.6□□□□□ -0.71
DDB1-211ENST00000538280 PLEKHA8P1O95397 391 aa10.6□□□□□ -0.71
DDB1-211ENST00000538280 PRDX5P30044 214 aa10.6□□□□□ -0.71
DDB1-211ENST00000538280 TPM4P67936 248 aa10.6□□□□□ -0.71
DDB1-211ENST00000538280 NR5A1Q13285 461 aa10.6□□□□□ -0.71
DDB1-211ENST00000538280 GRAPQ13588 217 aa10.6□□□□□ -0.71
DDB1-211ENST00000538280 LONRF3Q496Y0 759 aa10.6□□□□□ -0.71
DDB1-211ENST00000538280 EAPPQ56P03 285 aaPredicted RBP10.6□□□□□ -0.71
DDB1-211ENST00000538280 DNTTIP2Q5QJE6 756 aaKnown RBP10.6□□□□□ -0.71
DDB1-211ENST00000538280 IFIT1BQ5T764 474 aaKnown RBP10.6□□□□□ -0.71
DDB1-211ENST00000538280 SPTY2D1Q68D10 685 aaPredicted RBP10.6□□□□□ -0.71
DDB1-211ENST00000538280 LDHDQ86WU2 507 aa10.6□□□□□ -0.71
DDB1-211ENST00000538280 FOXP4Q8IVH2 680 aaPredicted RBP10.6□□□□□ -0.71
DDB1-211ENST00000538280 GRAPLQ8TC17 118 aaPredicted RBP10.6□□□□□ -0.71
DDB1-211ENST00000538280 ANKS1AQ92625 1134 aa10.6□□□□□ -0.71
DDB1-211ENST00000538280 MASTLQ96GX5 879 aa10.6□□□□□ -0.71
DDB1-211ENST00000538280 MAP7D2Q96T17 732 aa10.6□□□□□ -0.71
DDB1-211ENST00000538280 AATFQ9NY61 560 aaKnown RBP eCLIP10.6□□□□□ -0.71
DDB1-211ENST00000538280 FAM13BQ9NYF5 915 aa10.6□□□□□ -0.71
DDB1-211ENST00000538280 PCDHB6Q9Y5E3 794 aa10.6□□□□□ -0.71
DDB1-211ENST00000538280 FOCADQ5VW36 1801 aa10.6□□□□□ -0.71
DDB1-211ENST00000538280 BIN1O00499 593 aa10.59□□□□□ -0.71
DDB1-211ENST00000538280 BMP15O95972 392 aa10.59□□□□□ -0.71
DDB1-211ENST00000538280 XBP1P17861 261 aa10.59□□□□□ -0.71
DDB1-211ENST00000538280 KRT2P35908 639 aa10.59□□□□□ -0.71
DDB1-211ENST00000538280 PPP4CP60510 307 aa10.59□□□□□ -0.71
DDB1-211ENST00000538280 ST5P78524 1137 aa10.59□□□□□ -0.71
DDB1-211ENST00000538280 MYL5Q02045 173 aa10.59□□□□□ -0.71
DDB1-211ENST00000538280 GRIN1Q05586 938 aa10.59□□□□□ -0.71
DDB1-211ENST00000538280 PNOCQ13519 176 aa10.59□□□□□ -0.71
DDB1-211ENST00000538280 ZRSR1Q15695 479 aaKnown RBP10.59□□□□□ -0.71
DDB1-211ENST00000538280 RCSD1Q6JBY9 416 aa10.59□□□□□ -0.71
DDB1-211ENST00000538280 TXNRD3Q86VQ6 643 aa10.59□□□□□ -0.71
DDB1-211ENST00000538280 CMTR1Q8N1G2 835 aaKnown RBP10.59□□□□□ -0.71
DDB1-211ENST00000538280 TRIML1Q8N9V2 468 aa10.59□□□□□ -0.71
DDB1-211ENST00000538280 CCDC150Q8NCX0 1101 aa10.59□□□□□ -0.71
DDB1-211ENST00000538280 CNNM3Q8NE01 707 aa10.59□□□□□ -0.71
DDB1-211ENST00000538280 SPATA20Q8TB22 786 aa10.59□□□□□ -0.71
DDB1-211ENST00000538280 WDR66Q8TBY9 1149 aa10.59□□□□□ -0.71
DDB1-211ENST00000538280 CNKSR1Q969H4 720 aa10.59□□□□□ -0.71
DDB1-211ENST00000538280 XPO4Q9C0E2 1151 aaKnown RBP10.59□□□□□ -0.71
DDB1-211ENST00000538280 PCDHA5Q9Y5H7 936 aa10.59□□□□□ -0.71
DDB1-211ENST00000538280 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.58□□□□□ -0.72
DDB1-211ENST00000538280 ACTN4O43707 911 aaKnown RBP10.58□□□□□ -0.72
DDB1-211ENST00000538280 CYP2D6P10635 497 aa10.58□□□□□ -0.72
DDB1-211ENST00000538280 HSPA8P11142 646 aaKnown RBP10.58□□□□□ -0.72
DDB1-211ENST00000538280 BMP6P22004 513 aa10.58□□□□□ -0.72
DDB1-211ENST00000538280 LBX1P52954 281 aa10.58□□□□□ -0.72
DDB1-211ENST00000538280 FANCCQ00597 558 aa10.58□□□□□ -0.72
DDB1-211ENST00000538280 AKAP17AQ02040 695 aaKnown RBP10.58□□□□□ -0.72
DDB1-211ENST00000538280 EVX2Q03828 476 aa10.58□□□□□ -0.72
DDB1-211ENST00000538280 MORC3Q14149 939 aa10.58□□□□□ -0.72
DDB1-211ENST00000538280 ARID5BQ14865 1188 aa10.58□□□□□ -0.72
DDB1-211ENST00000538280 CCDC93Q567U6 631 aa10.58□□□□□ -0.72
DDB1-211ENST00000538280 EARS2Q5JPH6 523 aaKnown RBP10.58□□□□□ -0.72
DDB1-211ENST00000538280 C12orf60Q5U649 245 aa10.58□□□□□ -0.72
DDB1-211ENST00000538280 MAP1SQ66K74 1059 aaPredicted RBP10.58□□□□□ -0.72
DDB1-211ENST00000538280 KANK3Q6NY19 840 aa10.58□□□□□ -0.72
DDB1-211ENST00000538280 NYAP1Q6ZVC0 841 aa10.58□□□□□ -0.72
DDB1-211ENST00000538280 SH3RF1Q7Z6J0 888 aa10.58□□□□□ -0.72
DDB1-211ENST00000538280 SRBD1Q8N5C6 995 aaKnown RBP10.58□□□□□ -0.72
DDB1-211ENST00000538280 PDCL3Q9H2J4 239 aa10.58□□□□□ -0.72
DDB1-211ENST00000538280 IFNKQ9P0W0 207 aa10.58□□□□□ -0.72
DDB1-211ENST00000538280 VPS54Q9P1Q0 977 aa10.58□□□□□ -0.72
DDB1-211ENST00000538280 HOOK1Q9UJC3 728 aaKnown RBP10.58□□□□□ -0.72
DDB1-211ENST00000538280 MAN1B1Q9UKM7 699 aa10.58□□□□□ -0.72
DDB1-211ENST00000538280 XDHP47989 1333 aa10.58□□□□□ -0.72
DDB1-211ENST00000538280 FAM205CA6NFA0 338 aa10.57□□□□□ -0.72
DDB1-211ENST00000538280 TRIM75PA6NK02 468 aa10.57□□□□□ -0.72
DDB1-211ENST00000538280 TMEM88BA6NKF7 163 aa10.57□□□□□ -0.72
DDB1-211ENST00000538280 NPHP1O15259 732 aa10.57□□□□□ -0.72
DDB1-211ENST00000538280 CTIFO43310 598 aaKnown RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms