RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 PRPF3O43395 683 aaKnown RBP9.9□□□□□ -0.82
UBE3B-208ENST00000538070 MARCH6O60337 910 aa9.9□□□□□ -0.82
UBE3B-208ENST00000538070 NEMFO60524 1076 aa9.9□□□□□ -0.82
UBE3B-208ENST00000538070 NAPAP54920 295 aa9.9□□□□□ -0.82
UBE3B-208ENST00000538070 ILDR2Q71H61 639 aa9.9□□□□□ -0.82
UBE3B-208ENST00000538070 LRRC47Q8N1G4 583 aaKnown RBP9.9□□□□□ -0.82
UBE3B-208ENST00000538070 GPCPD1Q9NPB8 672 aa9.9□□□□□ -0.82
UBE3B-208ENST00000538070 LZTFL1Q9NQ48 299 aa9.9□□□□□ -0.82
UBE3B-208ENST00000538070 LRRC4BQ9NT99 713 aa9.9□□□□□ -0.82
UBE3B-208ENST00000538070 RBM28Q9NW13 759 aaKnown RBP9.9□□□□□ -0.82
UBE3B-208ENST00000538070 STK36Q9NRP7 1315 aa9.9□□□□□ -0.83
UBE3B-208ENST00000538070 SERPINB2P05120 415 aa9.89□□□□□ -0.83
UBE3B-208ENST00000538070 ELF2Q15723 593 aa9.89□□□□□ -0.83
UBE3B-208ENST00000538070 E4F1Q66K89 784 aaPredicted RBP9.89□□□□□ -0.83
UBE3B-208ENST00000538070 CCDC150Q8NCX0 1101 aa9.89□□□□□ -0.83
UBE3B-208ENST00000538070 PPP1R13BQ96KQ4 1090 aa9.89□□□□□ -0.83
UBE3B-208ENST00000538070 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.89□□□□□ -0.83
UBE3B-208ENST00000538070 ATP8A2Q9NTI2 1148 aa9.89□□□□□ -0.83
UBE3B-208ENST00000538070 TUBE1Q9UJT0 475 aa9.89□□□□□ -0.83
UBE3B-208ENST00000538070 DOT1LQ8TEK3 1739 aa9.89□□□□□ -0.83
UBE3B-208ENST00000538070 ATRNO75882 1429 aa9.89□□□□□ -0.83
UBE3B-208ENST00000538070 A0A0U1RQG5 324 aaPredicted RBP9.89□□□□□ -0.83
UBE3B-208ENST00000538070 CALM1P0DP23 149 aa9.89□□□□□ -0.83
UBE3B-208ENST00000538070 CALM2P0DP24 149 aa9.89□□□□□ -0.83
UBE3B-208ENST00000538070 CALM3P0DP25 149 aa9.89□□□□□ -0.83
UBE3B-208ENST00000538070 CACNB3P54284 484 aa9.89□□□□□ -0.83
UBE3B-208ENST00000538070 PPFIBP1Q86W92 1011 aa9.89□□□□□ -0.83
UBE3B-208ENST00000538070 PAGE5Q96GU1 130 aa9.89□□□□□ -0.83
UBE3B-208ENST00000538070 PCMTD1Q96MG8 357 aaPredicted RBP9.89□□□□□ -0.83
UBE3B-208ENST00000538070 TIGD1Q96MW7 591 aa9.89□□□□□ -0.83
UBE3B-208ENST00000538070 PHF20Q9BVI0 1012 aa9.89□□□□□ -0.83
UBE3B-208ENST00000538070 ARPP21Q9UBL0 812 aaPredicted RBP9.89□□□□□ -0.83
UBE3B-208ENST00000538070 GGA1Q9UJY5 639 aa9.89□□□□□ -0.83
UBE3B-208ENST00000538070 BAZ2AQ9UIF9 1905 aaKnown RBP9.89□□□□□ -0.83
UBE3B-208ENST00000538070 FAM196BA6NMK8 535 aa9.89□□□□□ -0.83
UBE3B-208ENST00000538070 STAT6P42226 847 aa9.89□□□□□ -0.83
UBE3B-208ENST00000538070 GNG11P61952 73 aa9.89□□□□□ -0.83
UBE3B-208ENST00000538070 TCP10Q12799 353 aa9.89□□□□□ -0.83
UBE3B-208ENST00000538070 GRAPQ13588 217 aa9.89□□□□□ -0.83
UBE3B-208ENST00000538070 CUL4BQ13620 913 aa9.89□□□□□ -0.83
UBE3B-208ENST00000538070 VPS72Q15906 364 aa9.89□□□□□ -0.83
UBE3B-208ENST00000538070 PRR5LQ6MZQ0 368 aa9.89□□□□□ -0.83
UBE3B-208ENST00000538070 ZSCAN29Q8IWY8 852 aaPredicted RBP9.89□□□□□ -0.83
UBE3B-208ENST00000538070 WDR66Q8TBY9 1149 aa9.89□□□□□ -0.83
UBE3B-208ENST00000538070 GRAPLQ8TC17 118 aaPredicted RBP9.89□□□□□ -0.83
UBE3B-208ENST00000538070 ZNF622Q969S3 477 aaKnown RBP eCLIP9.89□□□□□ -0.83
UBE3B-208ENST00000538070 EYA3Q99504 573 aa9.89□□□□□ -0.83
UBE3B-208ENST00000538070 MYH2Q9UKX2 1941 aa9.89□□□□□ -0.83
UBE3B-208ENST00000538070 UBA7P41226 1012 aa9.88□□□□□ -0.83
UBE3B-208ENST00000538070 ST5P78524 1137 aa9.88□□□□□ -0.83
UBE3B-208ENST00000538070 BLIDQ8IZY5 108 aa9.88□□□□□ -0.83
UBE3B-208ENST00000538070 IL17RBQ9NRM6 502 aa9.88□□□□□ -0.83
UBE3B-208ENST00000538070 BIN2Q9UBW5 565 aaPredicted RBP9.88□□□□□ -0.83
UBE3B-208ENST00000538070 KLRF2D3W0D1 207 aa9.88□□□□□ -0.83
UBE3B-208ENST00000538070 N4BP3O15049 544 aa9.88□□□□□ -0.83
UBE3B-208ENST00000538070 CD44P16070 742 aaKnown RBP9.88□□□□□ -0.83
UBE3B-208ENST00000538070 TXLNAP40222 546 aa9.88□□□□□ -0.83
UBE3B-208ENST00000538070 MTF1Q14872 753 aa9.88□□□□□ -0.83
UBE3B-208ENST00000538070 MNS1Q8NEH6 495 aa9.88□□□□□ -0.83
UBE3B-208ENST00000538070 TAB2Q9NYJ8 693 aa9.88□□□□□ -0.83
UBE3B-208ENST00000538070 DACH1Q9UI36 760 aa9.88□□□□□ -0.83
UBE3B-208ENST00000538070 GDAQ9Y2T3 454 aa9.88□□□□□ -0.83
UBE3B-208ENST00000538070 FAM205AQ6ZU69 1335 aa9.88□□□□□ -0.83
UBE3B-208ENST00000538070 CNTNAP5Q8WYK1 1306 aa9.88□□□□□ -0.83
UBE3B-208ENST00000538070 ACTN4O43707 911 aaKnown RBP9.88□□□□□ -0.83
UBE3B-208ENST00000538070 SSBP05455 408 aaKnown RBP eCLIP9.88□□□□□ -0.83
UBE3B-208ENST00000538070 NCBP1Q09161 790 aaKnown RBP9.88□□□□□ -0.83
UBE3B-208ENST00000538070 SOGA3Q5TF21 947 aa9.88□□□□□ -0.83
UBE3B-208ENST00000538070 TYW1BQ6NUM6 668 aa9.88□□□□□ -0.83
UBE3B-208ENST00000538070 LRRN4CLQ8ND94 238 aa9.88□□□□□ -0.83
UBE3B-208ENST00000538070 TMEM47Q9BQJ4 181 aa9.88□□□□□ -0.83
UBE3B-208ENST00000538070 HSD3B7Q9H2F3 369 aa9.88□□□□□ -0.83
UBE3B-208ENST00000538070 EPC1Q9H2F5 836 aa9.88□□□□□ -0.83
UBE3B-208ENST00000538070 PAXBP1Q9Y5B6 917 aa9.88□□□□□ -0.83
UBE3B-208ENST00000538070 SPEF2Q9C093 1822 aa9.87□□□□□ -0.83
UBE3B-208ENST00000538070 IKBKBO14920 756 aa9.87□□□□□ -0.83
UBE3B-208ENST00000538070 CCNT1O60563 726 aaKnown RBP9.87□□□□□ -0.83
UBE3B-208ENST00000538070 TM4SF1P30408 202 aa9.87□□□□□ -0.83
UBE3B-208ENST00000538070 ERCC6LQ2NKX8 1250 aa9.87□□□□□ -0.83
UBE3B-208ENST00000538070 BAG1Q99933 345 aaPredicted RBP9.87□□□□□ -0.83
UBE3B-208ENST00000538070 CD209Q9NNX6 404 aa9.87□□□□□ -0.83
UBE3B-208ENST00000538070 SYNRGQ9UMZ2 1314 aa9.87□□□□□ -0.83
UBE3B-208ENST00000538070 LDHCP07864 332 aa9.87□□□□□ -0.83
UBE3B-208ENST00000538070 SLC10A5Q5PT55 438 aa9.87□□□□□ -0.83
UBE3B-208ENST00000538070 C12orf60Q5U649 245 aa9.87□□□□□ -0.83
UBE3B-208ENST00000538070 IQUBQ8NA54 791 aa9.87□□□□□ -0.83
UBE3B-208ENST00000538070 MLKLQ8NB16 471 aa9.87□□□□□ -0.83
UBE3B-208ENST00000538070 MAP7D2Q96T17 732 aa9.87□□□□□ -0.83
UBE3B-208ENST00000538070 IRX2Q9BZI1 471 aaPredicted RBP9.87□□□□□ -0.83
UBE3B-208ENST00000538070 ANAPC4Q9UJX5 808 aa9.87□□□□□ -0.83
UBE3B-208ENST00000538070 XDHP47989 1333 aa9.87□□□□□ -0.83
UBE3B-208ENST00000538070 DDAH1O94760 285 aa9.87□□□□□ -0.83
UBE3B-208ENST00000538070 FUT2Q10981 343 aa9.87□□□□□ -0.83
UBE3B-208ENST00000538070 IKQ13123 557 aaPredicted RBP9.87□□□□□ -0.83
UBE3B-208ENST00000538070 CCDC96Q2M329 555 aa9.87□□□□□ -0.83
UBE3B-208ENST00000538070 CCDC178Q5BJE1 867 aa9.87□□□□□ -0.83
UBE3B-208ENST00000538070 RCSD1Q6JBY9 416 aa9.87□□□□□ -0.83
UBE3B-208ENST00000538070 IGSF22Q8N9C0 903 aa9.87□□□□□ -0.83
UBE3B-208ENST00000538070 COA7Q96BR5 231 aa9.87□□□□□ -0.83
UBE3B-208ENST00000538070 SEC63Q9UGP8 760 aaKnown RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms