RNA–Protein interactions for RNA: ENST00000537619.6

PTPRR-205, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best)

Gene PTPRR, Length 1,927 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-205ENST00000537619 PNMA1Q8ND90 353 aa10.68□□□□□ -0.7
PTPRR-205ENST00000537619 EPSTI1Q96J88 318 aa10.68□□□□□ -0.7
PTPRR-205ENST00000537619 MAD2L2Q9UI95 211 aa10.68□□□□□ -0.7
PTPRR-205ENST00000537619 GPR75-ASB3A0A0A6YYF3 556 aa10.67□□□□□ -0.7
PTPRR-205ENST00000537619 USP27XA6NNY8 438 aa10.67□□□□□ -0.7
PTPRR-205ENST00000537619 CYTH3O43739 400 aa10.67□□□□□ -0.7
PTPRR-205ENST00000537619 SMC2O95347 1197 aa10.67□□□□□ -0.7
PTPRR-205ENST00000537619 XBP1P17861 261 aa10.67□□□□□ -0.7
PTPRR-205ENST00000537619 FANCCQ00597 558 aa10.67□□□□□ -0.7
PTPRR-205ENST00000537619 FMR1Q06787 632 aaKnown RBP eCLIP10.67□□□□□ -0.7
PTPRR-205ENST00000537619 GRM4Q14833 912 aa10.67□□□□□ -0.7
PTPRR-205ENST00000537619 TTC38Q5R3I4 469 aa10.67□□□□□ -0.7
PTPRR-205ENST00000537619 NT5DC1Q5TFE4 455 aa10.67□□□□□ -0.7
PTPRR-205ENST00000537619 OLFM4Q6UX06 510 aa10.67□□□□□ -0.7
PTPRR-205ENST00000537619 DGKHQ86XP1 1220 aa10.67□□□□□ -0.7
PTPRR-205ENST00000537619 MYRIPQ8NFW9 859 aa10.67□□□□□ -0.7
PTPRR-205ENST00000537619 GPKOWQ92917 476 aaPredicted RBP eCLIP10.67□□□□□ -0.7
PTPRR-205ENST00000537619 MED15Q96RN5 788 aa10.67□□□□□ -0.7
PTPRR-205ENST00000537619 OSBPL5Q9H0X9 879 aaPredicted RBP10.67□□□□□ -0.7
PTPRR-205ENST00000537619 KAT14Q9H8E8 782 aa10.67□□□□□ -0.7
PTPRR-205ENST00000537619 FAM13BQ9NYF5 915 aa10.67□□□□□ -0.7
PTPRR-205ENST00000537619 CEP131Q9UPN4 1083 aa10.67□□□□□ -0.7
PTPRR-205ENST00000537619 SMTNL1A8MU46 457 aa10.66□□□□□ -0.7
PTPRR-205ENST00000537619 BAG3O95817 575 aa10.66□□□□□ -0.7
PTPRR-205ENST00000537619 MYL5Q02045 173 aa10.66□□□□□ -0.7
PTPRR-205ENST00000537619 IL17AQ16552 155 aa10.66□□□□□ -0.7
PTPRR-205ENST00000537619 ARMCX5Q6P1M9 558 aa10.66□□□□□ -0.7
PTPRR-205ENST00000537619 KRT27Q7Z3Y8 459 aa10.66□□□□□ -0.7
PTPRR-205ENST00000537619 TSC1Q92574 1164 aa10.66□□□□□ -0.7
PTPRR-205ENST00000537619 SYMPKQ92797 1274 aaKnown RBP10.66□□□□□ -0.7
PTPRR-205ENST00000537619 CRAMP1Q96RY5 1269 aa10.66□□□□□ -0.7
PTPRR-205ENST00000537619 TCP11L1Q9NUJ3 509 aa10.66□□□□□ -0.7
PTPRR-205ENST00000537619 INTS13Q9NVM9 706 aa10.66□□□□□ -0.7
PTPRR-205ENST00000537619 GAKO14976 1311 aa10.66□□□□□ -0.7
PTPRR-205ENST00000537619 FLT1P17948 1338 aa10.66□□□□□ -0.7
PTPRR-205ENST00000537619 M0R2N6 131 aa10.66□□□□□ -0.7
PTPRR-205ENST00000537619 BBOX1O75936 387 aa10.66□□□□□ -0.7
PTPRR-205ENST00000537619 LDHCP07864 332 aa10.66□□□□□ -0.7
PTPRR-205ENST00000537619 PRKCSHP14314 528 aaPredicted RBP10.66□□□□□ -0.7
PTPRR-205ENST00000537619 CASP1P29466 404 aa10.66□□□□□ -0.7
PTPRR-205ENST00000537619 ATP2C1P98194 919 aaPredicted RBP10.66□□□□□ -0.7
PTPRR-205ENST00000537619 MORC3Q14149 939 aa10.66□□□□□ -0.7
PTPRR-205ENST00000537619 TXNRD1Q16881 649 aa10.66□□□□□ -0.7
PTPRR-205ENST00000537619 MFSD14BQ5SR56 506 aa10.66□□□□□ -0.7
PTPRR-205ENST00000537619 PIK3AP1Q6ZUJ8 805 aa10.66□□□□□ -0.7
PTPRR-205ENST00000537619 TMC6Q7Z403 805 aa10.66□□□□□ -0.7
PTPRR-205ENST00000537619 SH3RF1Q7Z6J0 888 aa10.66□□□□□ -0.7
PTPRR-205ENST00000537619 TEX11Q8IYF3 940 aa10.66□□□□□ -0.7
PTPRR-205ENST00000537619 SPATA20Q8TB22 786 aa10.66□□□□□ -0.7
PTPRR-205ENST00000537619 RASGRP4Q8TDF6 673 aa10.66□□□□□ -0.7
PTPRR-205ENST00000537619 DHX58Q96C10 678 aa10.66□□□□□ -0.7
PTPRR-205ENST00000537619 TMEM47Q9BQJ4 181 aa10.66□□□□□ -0.7
PTPRR-205ENST00000537619 MKNK2Q9HBH9 465 aa10.66□□□□□ -0.7
PTPRR-205ENST00000537619 TMEM232C9JQI7 657 aa10.65□□□□□ -0.7
PTPRR-205ENST00000537619 CDK8P49336 464 aa10.65□□□□□ -0.7
PTPRR-205ENST00000537619 NLRP5P59047 1200 aa10.65□□□□□ -0.7
PTPRR-205ENST00000537619 PTGDRQ13258 359 aa10.65□□□□□ -0.7
PTPRR-205ENST00000537619 PTPN21Q16825 1174 aa10.65□□□□□ -0.7
PTPRR-205ENST00000537619 WWC2Q6AWC2 1192 aa10.65□□□□□ -0.7
PTPRR-205ENST00000537619 C16orf86Q6ZW13 317 aa10.65□□□□□ -0.7
PTPRR-205ENST00000537619 FAM163AQ96GL9 167 aaPredicted RBP10.65□□□□□ -0.7
PTPRR-205ENST00000537619 PRIMPOLQ96LW4 560 aa10.65□□□□□ -0.7
PTPRR-205ENST00000537619 C16orf45Q96MC5 204 aaPredicted RBP10.65□□□□□ -0.7
PTPRR-205ENST00000537619 CPVLQ9H3G5 476 aa10.65□□□□□ -0.7
PTPRR-205ENST00000537619 BRMS1Q9HCU9 246 aa10.65□□□□□ -0.7
PTPRR-205ENST00000537619 NRXN2Q9P2S2 1712 aa10.65□□□□□ -0.7
PTPRR-205ENST00000537619 PPEF1O14829 653 aaPredicted RBP10.64□□□□□ -0.71
PTPRR-205ENST00000537619 TSPY3P0CV98 308 aa10.64□□□□□ -0.71
PTPRR-205ENST00000537619 TSPY8P0CW00 308 aa10.64□□□□□ -0.71
PTPRR-205ENST00000537619 SKILP12757 684 aa10.64□□□□□ -0.71
PTPRR-205ENST00000537619 KIF5BP33176 963 aa10.64□□□□□ -0.71
PTPRR-205ENST00000537619 RBM10P98175 930 aaKnown RBP10.64□□□□□ -0.71
PTPRR-205ENST00000537619 TRMT44Q8IYL2 757 aaKnown RBP10.64□□□□□ -0.71
PTPRR-205ENST00000537619 C4orf32Q8N8J7 132 aa10.64□□□□□ -0.71
PTPRR-205ENST00000537619 FANCLQ9NW38 375 aa10.64□□□□□ -0.71
PTPRR-205ENST00000537619 MTMR7Q9Y216 660 aa10.64□□□□□ -0.71
PTPRR-205ENST00000537619 DAGLAQ9Y4D2 1042 aa10.64□□□□□ -0.71
PTPRR-205ENST00000537619 COL11A2P13942 1736 aaPredicted RBP10.64□□□□□ -0.71
PTPRR-205ENST00000537619 ADAMTSL1Q8N6G6 1762 aa10.64□□□□□ -0.71
PTPRR-205ENST00000537619 VWA3AA6NCI4 1184 aa10.64□□□□□ -0.71
PTPRR-205ENST00000537619 PALM3A6NDB9 673 aaPredicted RBP10.64□□□□□ -0.71
PTPRR-205ENST00000537619 C6orf229H3BNL8 230 aa10.64□□□□□ -0.71
PTPRR-205ENST00000537619 DYNC1I1O14576 645 aa10.64□□□□□ -0.71
PTPRR-205ENST00000537619 NEMFO60524 1076 aa10.64□□□□□ -0.71
PTPRR-205ENST00000537619 GTF2F1P35269 517 aaKnown RBP eCLIP10.64□□□□□ -0.71
PTPRR-205ENST00000537619 E2F4Q16254 413 aa10.64□□□□□ -0.71
PTPRR-205ENST00000537619 BLIDQ8IZY5 108 aa10.64□□□□□ -0.71
PTPRR-205ENST00000537619 CERS5Q8N5B7 392 aa10.64□□□□□ -0.71
PTPRR-205ENST00000537619 SMARCE1Q969G3 411 aa10.64□□□□□ -0.71
PTPRR-205ENST00000537619 FERMT2Q96AC1 680 aa10.64□□□□□ -0.71
PTPRR-205ENST00000537619 PAGE5Q96GU1 130 aa10.64□□□□□ -0.71
PTPRR-205ENST00000537619 EYA3Q99504 573 aa10.64□□□□□ -0.71
PTPRR-205ENST00000537619 NOL10Q9BSC4 688 aaKnown RBP10.64□□□□□ -0.71
PTPRR-205ENST00000537619 MXD3Q9BW11 206 aa10.64□□□□□ -0.71
PTPRR-205ENST00000537619 IMPACTQ9P2X3 320 aa10.64□□□□□ -0.71
PTPRR-205ENST00000537619 FOCADQ5VW36 1801 aa10.63□□□□□ -0.71
PTPRR-205ENST00000537619 STXBP3O00186 592 aa10.63□□□□□ -0.71
PTPRR-205ENST00000537619 RIOK3O14730 519 aaKnown RBP10.63□□□□□ -0.71
PTPRR-205ENST00000537619 RIMBP2O15034 1052 aa10.63□□□□□ -0.71
PTPRR-205ENST00000537619 BMP15O95972 392 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms