RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 CNTROBQ8N137 903 aa8.87□□□□□ -0.99
YBX3-206ENST00000536823 JMYQ8N9B5 988 aa8.87□□□□□ -0.99
YBX3-206ENST00000536823 ELOA3Q8NG57 546 aa8.87□□□□□ -0.99
YBX3-206ENST00000536823 TRPM4Q8TD43 1214 aa8.87□□□□□ -0.99
YBX3-206ENST00000536823 DPF2Q92785 391 aa8.87□□□□□ -0.99
YBX3-206ENST00000536823 SMC4Q9NTJ3 1288 aa8.87□□□□□ -0.99
YBX3-206ENST00000536823 C9orf78Q9NZ63 289 aaPredicted RBP8.87□□□□□ -0.99
YBX3-206ENST00000536823 UTYO14607 1347 aa8.86□□□□□ -0.99
YBX3-206ENST00000536823 TRPM7Q96QT4 1865 aa8.86□□□□□ -0.99
YBX3-206ENST00000536823 SHTN1A0MZ66 631 aa8.86□□□□□ -0.99
YBX3-206ENST00000536823 ANKRD18BA2A2Z9 1011 aa8.86□□□□□ -0.99
YBX3-206ENST00000536823 VIL1P09327 827 aaKnown RBP8.86□□□□□ -0.99
YBX3-206ENST00000536823 NR1H3Q13133 447 aa8.86□□□□□ -0.99
YBX3-206ENST00000536823 IFIT5Q13325 482 aaKnown RBP8.86□□□□□ -0.99
YBX3-206ENST00000536823 IRF5Q13568 498 aa8.86□□□□□ -0.99
YBX3-206ENST00000536823 EPHA10Q5JZY3 1008 aa8.86□□□□□ -0.99
YBX3-206ENST00000536823 LMBR1LQ6UX01 489 aa8.86□□□□□ -0.99
YBX3-206ENST00000536823 MPHOSPH8Q99549 860 aa8.86□□□□□ -0.99
YBX3-206ENST00000536823 ANKRD2Q9GZV1 360 aa8.86□□□□□ -0.99
YBX3-206ENST00000536823 KCNQ5Q9NR82 932 aa8.86□□□□□ -0.99
YBX3-206ENST00000536823 CNOT7Q9UIV1 285 aaKnown RBP8.86□□□□□ -0.99
YBX3-206ENST00000536823 LEMD3Q9Y2U8 911 aa8.86□□□□□ -0.99
YBX3-206ENST00000536823 CHMP3Q9Y3E7 222 aa8.86□□□□□ -0.99
YBX3-206ENST00000536823 CNTNAP1P78357 1384 aa8.86□□□□□ -0.99
YBX3-206ENST00000536823 ZNF646O15015 1829 aaPredicted RBP8.85□□□□□ -0.99
YBX3-206ENST00000536823 WTIPA6NIX2 430 aaPredicted RBP8.85□□□□□ -0.99
YBX3-206ENST00000536823 TMEM88BA6NKF7 163 aa8.85□□□□□ -0.99
YBX3-206ENST00000536823 H7C1D1 291 aa8.85□□□□□ -0.99
YBX3-206ENST00000536823 ABL2P42684 1182 aa8.85□□□□□ -0.99
YBX3-206ENST00000536823 CHRNDQ07001 517 aa8.85□□□□□ -0.99
YBX3-206ENST00000536823 MCTP1Q6DN14 999 aa8.85□□□□□ -0.99
YBX3-206ENST00000536823 SUCLG2Q96I99 432 aa8.85□□□□□ -0.99
YBX3-206ENST00000536823 ZNF804BA4D1E1 1349 aa8.84□□□□□ -0.99
YBX3-206ENST00000536823 A0A1W2PNR3 127 aa8.84□□□□□ -0.99
YBX3-206ENST00000536823 USP17L3A6NCW0 530 aa8.84□□□□□ -0.99
YBX3-206ENST00000536823 USP17L4A6NCW7 530 aa8.84□□□□□ -0.99
YBX3-206ENST00000536823 COBLO75128 1261 aa8.84□□□□□ -0.99
YBX3-206ENST00000536823 NBPF7P0C2Y1 421 aaPredicted RBP8.84□□□□□ -0.99
YBX3-206ENST00000536823 HIRAP54198 1017 aaPredicted RBP8.84□□□□□ -0.99
YBX3-206ENST00000536823 GRIK4Q16099 956 aa8.84□□□□□ -0.99
YBX3-206ENST00000536823 CCDC57Q2TAC2 916 aa8.84□□□□□ -0.99
YBX3-206ENST00000536823 TAF7LQ5H9L4 462 aa8.84□□□□□ -0.99
YBX3-206ENST00000536823 USP17L1Q7RTZ2 530 aa8.84□□□□□ -0.99
YBX3-206ENST00000536823 AGBL3Q8NEM8 1001 aa8.84□□□□□ -0.99
YBX3-206ENST00000536823 AIDAQ96BJ3 306 aa8.84□□□□□ -0.99
YBX3-206ENST00000536823 KAZALD1Q96I82 304 aa8.84□□□□□ -0.99
YBX3-206ENST00000536823 GMLQ99445 158 aa8.84□□□□□ -0.99
YBX3-206ENST00000536823 COA1Q9GZY4 146 aa8.84□□□□□ -0.99
YBX3-206ENST00000536823 PGAP2Q9UHJ9 254 aa8.84□□□□□ -0.99
YBX3-206ENST00000536823 IRS2Q9Y4H2 1338 aa8.83□□□□□ -1
YBX3-206ENST00000536823 TRAF5O00463 557 aa8.83□□□□□ -1
YBX3-206ENST00000536823 EGFRP00533 1210 aa8.83□□□□□ -1
YBX3-206ENST00000536823 KLRK1P26718 216 aa8.83□□□□□ -1
YBX3-206ENST00000536823 KCNJ4P48050 445 aa8.83□□□□□ -1
YBX3-206ENST00000536823 RARSP54136 660 aaKnown RBP8.83□□□□□ -1
YBX3-206ENST00000536823 ZNF280AP59817 542 aaPredicted RBP8.83□□□□□ -1
YBX3-206ENST00000536823 FMR1Q06787 632 aaKnown RBP eCLIP8.83□□□□□ -1
YBX3-206ENST00000536823 RABL6Q3YEC7 729 aaPredicted RBP8.83□□□□□ -1
YBX3-206ENST00000536823 TBC1D10BQ4KMP7 808 aaPredicted RBP8.83□□□□□ -1
YBX3-206ENST00000536823 ARSJQ5FYB0 599 aaPredicted RBP8.83□□□□□ -1
YBX3-206ENST00000536823 C15orf52Q6ZUT6 534 aaKnown RBP8.83□□□□□ -1
YBX3-206ENST00000536823 TXNRD3Q86VQ6 643 aa8.83□□□□□ -1
YBX3-206ENST00000536823 ANKRD44Q8N8A2 993 aa8.83□□□□□ -1
YBX3-206ENST00000536823 GLIS2Q9BZE0 524 aaPredicted RBP8.83□□□□□ -1
YBX3-206ENST00000536823 BICC1Q9H694 974 aaKnown RBP8.83□□□□□ -1
YBX3-206ENST00000536823 ETNK1Q9HBU6 452 aa8.83□□□□□ -1
YBX3-206ENST00000536823 MKRN1Q9UHC7 482 aaKnown RBP8.83□□□□□ -1
YBX3-206ENST00000536823 KIF16BQ96L93 1317 aa8.82□□□□□ -1
YBX3-206ENST00000536823 M0R082 166 aa8.82□□□□□ -1
YBX3-206ENST00000536823 SNAP23O00161 211 aa8.82□□□□□ -1
YBX3-206ENST00000536823 STAU1O95793 577 aaKnown RBP8.82□□□□□ -1
YBX3-206ENST00000536823 FAM157BP0CG42 384 aa8.82□□□□□ -1
YBX3-206ENST00000536823 KIF4BQ2VIQ3 1234 aa8.82□□□□□ -1
YBX3-206ENST00000536823 DACT2Q5SW24 774 aa8.82□□□□□ -1
YBX3-206ENST00000536823 STRIP1Q5VSL9 837 aa8.82□□□□□ -1
YBX3-206ENST00000536823 LDHAL6AQ6ZMR3 332 aa8.82□□□□□ -1
YBX3-206ENST00000536823 ZNF417Q8TAU3 575 aa8.82□□□□□ -1
YBX3-206ENST00000536823 ZNF594Q96JF6 807 aaPredicted RBP8.82□□□□□ -1
YBX3-206ENST00000536823 ZNF587Q96SQ5 575 aaPredicted RBP8.82□□□□□ -1
YBX3-206ENST00000536823 API5Q9BZZ5 524 aaKnown RBP8.82□□□□□ -1
YBX3-206ENST00000536823 USP44Q9H0E7 712 aa8.82□□□□□ -1
YBX3-206ENST00000536823 CNNM1Q9NRU3 951 aa8.82□□□□□ -1
YBX3-206ENST00000536823 POLR2AP24928 1970 aaKnown RBP8.82□□□□□ -1
YBX3-206ENST00000536823 MYO3BQ8WXR4 1341 aa8.81□□□□□ -1
YBX3-206ENST00000536823 RASSF10A6NK89 507 aa8.81□□□□□ -1
YBX3-206ENST00000536823 TAF5LO75529 589 aa8.81□□□□□ -1
YBX3-206ENST00000536823 HNRNPUQ00839 825 aaKnown RBP eCLIP8.81□□□□□ -1
YBX3-206ENST00000536823 COL9A3Q14050 684 aaPredicted RBP8.81□□□□□ -1
YBX3-206ENST00000536823 CST9Q5W186 159 aa8.81□□□□□ -1
YBX3-206ENST00000536823 CDC37L1Q7L3B6 337 aa8.81□□□□□ -1
YBX3-206ENST00000536823 KRTAP4-7Q9BYR0 210 aa8.81□□□□□ -1
YBX3-206ENST00000536823 GGA3Q9NZ52 723 aa8.81□□□□□ -1
YBX3-206ENST00000536823 MARK1Q9P0L2 795 aa8.81□□□□□ -1
YBX3-206ENST00000536823 NOB1Q9ULX3 412 aaKnown RBP8.81□□□□□ -1
YBX3-206ENST00000536823 THSD7BQ9C0I4 1608 aa8.8□□□□□ -1
YBX3-206ENST00000536823 CELF2O95319 508 aaKnown RBP8.8□□□□□ -1
YBX3-206ENST00000536823 UBE4AQ14139 1066 aa8.8□□□□□ -1
YBX3-206ENST00000536823 KRT26Q7Z3Y9 468 aa8.8□□□□□ -1
YBX3-206ENST00000536823 ZNF804AQ7Z570 1209 aa8.8□□□□□ -1
YBX3-206ENST00000536823 SYT9Q86SS6 491 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms