RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 LRRCC1Q9C099 1032 aa23.73■■□□□ 1.39
TNFRSF1B-204ENST00000536782 HOXC10Q9NYD6 342 aa23.73■■□□□ 1.39
TNFRSF1B-204ENST00000536782 STAP2Q9UGK3 403 aa23.73■■□□□ 1.39
TNFRSF1B-204ENST00000536782 UBE3CQ15386 1083 aa23.72■■□□□ 1.39
TNFRSF1B-204ENST00000536782 MFSD14CQ5VZR4 134 aa23.72■■□□□ 1.39
TNFRSF1B-204ENST00000536782 AMOTL1Q8IY63 956 aa23.72■■□□□ 1.39
TNFRSF1B-204ENST00000536782 TANGO6Q9C0B7 1094 aa23.72■■□□□ 1.39
TNFRSF1B-204ENST00000536782 RLFQ13129 1914 aa23.72■■□□□ 1.39
TNFRSF1B-204ENST00000536782 SOX1O00570 391 aaPredicted RBP23.71■■□□□ 1.39
TNFRSF1B-204ENST00000536782 GRB14Q14449 540 aa23.71■■□□□ 1.39
TNFRSF1B-204ENST00000536782 LHX8Q68G74 356 aa23.71■■□□□ 1.39
TNFRSF1B-204ENST00000536782 DDRGK1Q96HY6 314 aa23.71■■□□□ 1.39
TNFRSF1B-204ENST00000536782 HOXC6P09630 235 aa23.7■■□□□ 1.38
TNFRSF1B-204ENST00000536782 ATP2B2Q01814 1243 aa23.7■■□□□ 1.38
TNFRSF1B-204ENST00000536782 C20orf194Q5TEA3 1177 aa23.7■■□□□ 1.38
TNFRSF1B-204ENST00000536782 C12orf60Q5U649 245 aa23.7■■□□□ 1.38
TNFRSF1B-204ENST00000536782 ZSCAN25Q6NSZ9 544 aa23.7■■□□□ 1.38
TNFRSF1B-204ENST00000536782 LPAR1Q92633 364 aa23.7■■□□□ 1.38
TNFRSF1B-204ENST00000536782 CCDC17Q96LX7 622 aa23.7■■□□□ 1.38
TNFRSF1B-204ENST00000536782 ARHGEF10LQ9HCE6 1279 aa23.7■■□□□ 1.38
TNFRSF1B-204ENST00000536782 FLRT1Q9NZU1 646 aa23.7■■□□□ 1.38
TNFRSF1B-204ENST00000536782 ZMYND8Q9ULU4 1186 aaPredicted RBP23.7■■□□□ 1.38
TNFRSF1B-204ENST00000536782 MYH8P13535 1937 aa23.7■■□□□ 1.38
TNFRSF1B-204ENST00000536782 PFASO15067 1338 aa23.69■■□□□ 1.38
TNFRSF1B-204ENST00000536782 AKR1B1P15121 316 aa23.69■■□□□ 1.38
TNFRSF1B-204ENST00000536782 ICA1Q05084 483 aa23.69■■□□□ 1.38
TNFRSF1B-204ENST00000536782 SH2D4AQ9H788 454 aa23.69■■□□□ 1.38
TNFRSF1B-204ENST00000536782 USP17L12C9JPN9 530 aa23.68■■□□□ 1.38
TNFRSF1B-204ENST00000536782 USP17L21D6R901 530 aa23.68■■□□□ 1.38
TNFRSF1B-204ENST00000536782 SMARCA5O60264 1052 aaPredicted RBP23.68■■□□□ 1.38
TNFRSF1B-204ENST00000536782 CHGBP05060 677 aa23.68■■□□□ 1.38
TNFRSF1B-204ENST00000536782 COL6A1P12109 1028 aa23.68■■□□□ 1.38
TNFRSF1B-204ENST00000536782 CDK8P49336 464 aa23.68■■□□□ 1.38
TNFRSF1B-204ENST00000536782 GDF15Q99988 308 aa23.68■■□□□ 1.38
TNFRSF1B-204ENST00000536782 MOV10L1Q9BXT6 1211 aaKnown RBP23.68■■□□□ 1.38
TNFRSF1B-204ENST00000536782 TMX2Q9Y320 296 aa23.68■■□□□ 1.38
TNFRSF1B-204ENST00000536782 SLC4A4Q9Y6R1 1079 aa23.68■■□□□ 1.38
TNFRSF1B-204ENST00000536782 BAZ2AQ9UIF9 1905 aaKnown RBP23.67■■□□□ 1.38
TNFRSF1B-204ENST00000536782 CYP2D7A0A087X1C5 515 aa23.67■■□□□ 1.38
TNFRSF1B-204ENST00000536782 STRNO43815 780 aa23.67■■□□□ 1.38
TNFRSF1B-204ENST00000536782 BMP8BP34820 402 aa23.67■■□□□ 1.38
TNFRSF1B-204ENST00000536782 KIAA1755Q5JYT7 1200 aa23.67■■□□□ 1.38
TNFRSF1B-204ENST00000536782 C16orf86Q6ZW13 317 aa23.67■■□□□ 1.38
TNFRSF1B-204ENST00000536782 CLEC10AQ8IUN9 316 aa23.67■■□□□ 1.38
TNFRSF1B-204ENST00000536782 SIAH1Q8IUQ4 282 aa23.67■■□□□ 1.38
TNFRSF1B-204ENST00000536782 MB21D1Q8N884 522 aa23.67■■□□□ 1.38
TNFRSF1B-204ENST00000536782 SHCBP1Q8NEM2 672 aa23.67■■□□□ 1.38
TNFRSF1B-204ENST00000536782 NPLOC4Q8TAT6 608 aa23.67■■□□□ 1.38
TNFRSF1B-204ENST00000536782 SPATC1LQ9H0A9 340 aa23.67■■□□□ 1.38
TNFRSF1B-204ENST00000536782 SMIM22K7EJ46 135 aa23.66■■□□□ 1.38
TNFRSF1B-204ENST00000536782 SYN1P17600 705 aa23.66■■□□□ 1.38
TNFRSF1B-204ENST00000536782 DSG3P32926 999 aa23.66■■□□□ 1.38
TNFRSF1B-204ENST00000536782 DPP9Q86TI2 863 aa23.66■■□□□ 1.38
TNFRSF1B-204ENST00000536782 SPICE1Q8N0Z3 855 aa23.66■■□□□ 1.38
TNFRSF1B-204ENST00000536782 PUS7LQ9H0K6 701 aaKnown RBP23.66■■□□□ 1.38
TNFRSF1B-204ENST00000536782 VCPKMTQ9H867 229 aa23.66■■□□□ 1.38
TNFRSF1B-204ENST00000536782 PARP14Q460N5 1801 aa23.66■■□□□ 1.38
TNFRSF1B-204ENST00000536782 LAMA2P24043 3122 aaKnown RBP23.65■■□□□ 1.38
TNFRSF1B-204ENST00000536782 A0A0C4DFX4 3053 aa23.65■■□□□ 1.38
TNFRSF1B-204ENST00000536782 MSCO60682 206 aa23.65■■□□□ 1.38
TNFRSF1B-204ENST00000536782 FLOT1O75955 427 aa23.65■■□□□ 1.38
TNFRSF1B-204ENST00000536782 ERCC3P19447 782 aa23.65■■□□□ 1.38
TNFRSF1B-204ENST00000536782 ADORA2AP29274 412 aa23.65■■□□□ 1.38
TNFRSF1B-204ENST00000536782 CNGA1P29973 690 aa23.65■■□□□ 1.38
TNFRSF1B-204ENST00000536782 LRCH3Q96II8 777 aa23.65■■□□□ 1.38
TNFRSF1B-204ENST00000536782 ECHDC1Q9NTX5 307 aa23.65■■□□□ 1.38
TNFRSF1B-204ENST00000536782 DDX20Q9UHI6 824 aaKnown RBP23.65■■□□□ 1.38
TNFRSF1B-204ENST00000536782 WDR46O15213 610 aaKnown RBP23.64■■□□□ 1.37
TNFRSF1B-204ENST00000536782 CYP2C19P33261 490 aa23.64■■□□□ 1.37
TNFRSF1B-204ENST00000536782 PLS1Q14651 629 aa23.64■■□□□ 1.37
TNFRSF1B-204ENST00000536782 CTR9Q6PD62 1173 aa23.64■■□□□ 1.37
TNFRSF1B-204ENST00000536782 KANSL2Q9H9L4 492 aa23.64■■□□□ 1.37
TNFRSF1B-204ENST00000536782 MYH7P12883 1935 aa23.64■■□□□ 1.37
TNFRSF1B-204ENST00000536782 ZNFX1Q9P2E3 1918 aaKnown RBP23.64■■□□□ 1.37
TNFRSF1B-204ENST00000536782 A0A0G2JMZ2 1700 aa23.63■■□□□ 1.37
TNFRSF1B-204ENST00000536782 ATG4CQ96DT6 458 aa23.63■■□□□ 1.37
TNFRSF1B-204ENST00000536782 MROH8Q9H579 483 aa23.63■■□□□ 1.37
TNFRSF1B-204ENST00000536782 SLC5A4Q9NY91 659 aa23.63■■□□□ 1.37
TNFRSF1B-204ENST00000536782 ARPP21Q9UBL0 812 aaPredicted RBP23.63■■□□□ 1.37
TNFRSF1B-204ENST00000536782 IGHA2P01877 340 aa23.62■■□□□ 1.37
TNFRSF1B-204ENST00000536782 EEF2P13639 858 aaKnown RBP23.62■■□□□ 1.37
TNFRSF1B-204ENST00000536782 MAGEA10P43363 369 aaPredicted RBP23.62■■□□□ 1.37
TNFRSF1B-204ENST00000536782 LRRC26Q2I0M4 334 aa23.62■■□□□ 1.37
TNFRSF1B-204ENST00000536782 OLFML2BQ68BL8 750 aa23.62■■□□□ 1.37
TNFRSF1B-204ENST00000536782 SAMD1Q6SPF0 538 aaPredicted RBP23.62■■□□□ 1.37
TNFRSF1B-204ENST00000536782 NCAPG2Q86XI2 1143 aa23.62■■□□□ 1.37
TNFRSF1B-204ENST00000536782 GPATCH3Q96I76 525 aa23.62■■□□□ 1.37
TNFRSF1B-204ENST00000536782 CYBAP13498 195 aa23.61■■□□□ 1.37
TNFRSF1B-204ENST00000536782 TRPV1Q8NER1 839 aa23.61■■□□□ 1.37
TNFRSF1B-204ENST00000536782 STRBPQ96SI9 672 aaKnown RBP23.61■■□□□ 1.37
TNFRSF1B-204ENST00000536782 DCTPP1Q9H773 170 aa23.61■■□□□ 1.37
TNFRSF1B-204ENST00000536782 ZNF236Q9UL36 1845 aa23.61■■□□□ 1.37
TNFRSF1B-204ENST00000536782 ABRAQ8N0Z2 381 aa23.6■■□□□ 1.37
TNFRSF1B-204ENST00000536782 KBTBD3Q8NAB2 608 aa23.6■■□□□ 1.37
TNFRSF1B-204ENST00000536782 SENP6Q9GZR1 1112 aaPredicted RBP23.6■■□□□ 1.37
TNFRSF1B-204ENST00000536782 GOPCQ9HD26 462 aa23.6■■□□□ 1.37
TNFRSF1B-204ENST00000536782 COL11A1P12107 1806 aaPredicted RBP23.59■■□□□ 1.37
TNFRSF1B-204ENST00000536782 COBLO75128 1261 aa23.59■■□□□ 1.37
TNFRSF1B-204ENST00000536782 DNM1LO00429 736 aa23.58■■□□□ 1.37
TNFRSF1B-204ENST00000536782 SLC25A27O95847 323 aa23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms