RNA–Protein interactions for RNA: ENST00000536404.6

CHRNB1-202, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNB1, Length 1,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-202ENST00000536404 PPIL2Q13356 520 aa13.39□□□□□ -0.27
CHRNB1-202ENST00000536404 ANO6Q4KMQ2 910 aa13.39□□□□□ -0.27
CHRNB1-202ENST00000536404 DZIP1Q86YF9 867 aaKnown RBP13.39□□□□□ -0.27
CHRNB1-202ENST00000536404 HOMEZQ8IX15 550 aa13.39□□□□□ -0.27
CHRNB1-202ENST00000536404 BICD2Q8TD16 824 aa13.39□□□□□ -0.27
CHRNB1-202ENST00000536404 LEO1Q8WVC0 666 aaPredicted RBP13.39□□□□□ -0.27
CHRNB1-202ENST00000536404 FSD1Q9BTV5 496 aa13.39□□□□□ -0.27
CHRNB1-202ENST00000536404 ZFYVE28Q9HCC9 887 aa13.39□□□□□ -0.27
CHRNB1-202ENST00000536404 DACT1Q9NYF0 836 aa13.39□□□□□ -0.27
CHRNB1-202ENST00000536404 PTPN22Q9Y2R2 807 aa13.39□□□□□ -0.27
CHRNB1-202ENST00000536404 TCHHQ07283 1943 aa13.39□□□□□ -0.27
CHRNB1-202ENST00000536404 GAKO14976 1311 aa13.39□□□□□ -0.27
CHRNB1-202ENST00000536404 CPA1P15085 419 aa13.39□□□□□ -0.27
CHRNB1-202ENST00000536404 PTGS1P23219 599 aa13.39□□□□□ -0.27
CHRNB1-202ENST00000536404 ZNF165P49910 485 aa13.39□□□□□ -0.27
CHRNB1-202ENST00000536404 SNAPC2Q13487 334 aa13.39□□□□□ -0.27
CHRNB1-202ENST00000536404 PI16Q6UXB8 463 aa13.39□□□□□ -0.27
CHRNB1-202ENST00000536404 CCDC186Q7Z3E2 898 aa13.39□□□□□ -0.27
CHRNB1-202ENST00000536404 CCDC112Q8NEF3 446 aa13.39□□□□□ -0.27
CHRNB1-202ENST00000536404 U3KPZ7 1027 aaPredicted RBP13.39□□□□□ -0.27
CHRNB1-202ENST00000536404 PDS5AQ29RF7 1337 aaKnown RBP13.38□□□□□ -0.27
CHRNB1-202ENST00000536404 AP5Z1O43299 807 aa13.38□□□□□ -0.27
CHRNB1-202ENST00000536404 TUBB4AP04350 444 aa13.38□□□□□ -0.27
CHRNB1-202ENST00000536404 APPP05067 770 aa13.38□□□□□ -0.27
CHRNB1-202ENST00000536404 SLURP2P0DP57 97 aa13.38□□□□□ -0.27
CHRNB1-202ENST00000536404 LIG1P18858 919 aa13.38□□□□□ -0.27
CHRNB1-202ENST00000536404 PPATQ06203 517 aa13.38□□□□□ -0.27
CHRNB1-202ENST00000536404 ST3GAL1Q11201 340 aa13.38□□□□□ -0.27
CHRNB1-202ENST00000536404 SH3BP5LQ7L8J4 393 aa13.38□□□□□ -0.27
CHRNB1-202ENST00000536404 C17orf53Q8N3J3 647 aaPredicted RBP13.38□□□□□ -0.27
CHRNB1-202ENST00000536404 NECAB1Q8N987 351 aa13.38□□□□□ -0.27
CHRNB1-202ENST00000536404 ZNF384Q8TF68 577 aa13.38□□□□□ -0.27
CHRNB1-202ENST00000536404 FAM163AQ96GL9 167 aaPredicted RBP13.38□□□□□ -0.27
CHRNB1-202ENST00000536404 MRFAP1L1Q96HT8 127 aa13.38□□□□□ -0.27
CHRNB1-202ENST00000536404 LARP6Q9BRS8 491 aaKnown RBP13.38□□□□□ -0.27
CHRNB1-202ENST00000536404 IDI2Q9BXS1 227 aa13.38□□□□□ -0.27
CHRNB1-202ENST00000536404 DDX4Q9NQI0 724 aaKnown RBP13.38□□□□□ -0.27
CHRNB1-202ENST00000536404 H3BQV1 296 aa13.37□□□□□ -0.27
CHRNB1-202ENST00000536404 SLFN14P0C7P3 912 aa13.37□□□□□ -0.27
CHRNB1-202ENST00000536404 TNNT1P13805 278 aa13.37□□□□□ -0.27
CHRNB1-202ENST00000536404 BTDP43251 543 aa13.37□□□□□ -0.27
CHRNB1-202ENST00000536404 MECOMQ03112 1051 aa13.37□□□□□ -0.27
CHRNB1-202ENST00000536404 STX1AQ16623 288 aa13.37□□□□□ -0.27
CHRNB1-202ENST00000536404 GORABQ5T7V8 394 aa13.37□□□□□ -0.27
CHRNB1-202ENST00000536404 SPTY2D1Q68D10 685 aaPredicted RBP13.37□□□□□ -0.27
CHRNB1-202ENST00000536404 ZSCAN25Q6NSZ9 544 aa13.37□□□□□ -0.27
CHRNB1-202ENST00000536404 LUZP1Q86V48 1076 aa13.37□□□□□ -0.27
CHRNB1-202ENST00000536404 CLIP2Q9UDT6 1046 aa13.37□□□□□ -0.27
CHRNB1-202ENST00000536404 PHF20L1A8MW92 1017 aa13.36□□□□□ -0.27
CHRNB1-202ENST00000536404 ENTPD3O75355 529 aa13.36□□□□□ -0.27
CHRNB1-202ENST00000536404 WDHD1O75717 1129 aaPredicted RBP13.36□□□□□ -0.27
CHRNB1-202ENST00000536404 TPRNQ4KMQ1 711 aa13.36□□□□□ -0.27
CHRNB1-202ENST00000536404 NOL9Q5SY16 702 aaKnown RBP13.36□□□□□ -0.27
CHRNB1-202ENST00000536404 NAA16Q6N069 864 aaPredicted RBP13.36□□□□□ -0.27
CHRNB1-202ENST00000536404 SPATA5Q8NB90 893 aa13.36□□□□□ -0.27
CHRNB1-202ENST00000536404 GTF3C6Q969F1 213 aa13.36□□□□□ -0.27
CHRNB1-202ENST00000536404 ZNF396Q96N95 335 aaPredicted RBP13.36□□□□□ -0.27
CHRNB1-202ENST00000536404 NAT10Q9H0A0 1025 aaKnown RBP13.36□□□□□ -0.27
CHRNB1-202ENST00000536404 ATRNL1Q5VV63 1379 aa13.36□□□□□ -0.27
CHRNB1-202ENST00000536404 MROH7-TTC4A0A0A0MT08 1334 aa13.36□□□□□ -0.27
CHRNB1-202ENST00000536404 DDTLA6NHG4 134 aaPredicted RBP13.35□□□□□ -0.27
CHRNB1-202ENST00000536404 NRDCO43847 1150 aa13.35□□□□□ -0.27
CHRNB1-202ENST00000536404 TLR2O60603 784 aa13.35□□□□□ -0.27
CHRNB1-202ENST00000536404 GSDMDP57764 484 aa13.35□□□□□ -0.27
CHRNB1-202ENST00000536404 PICALMQ13492 652 aa13.35□□□□□ -0.27
CHRNB1-202ENST00000536404 MOGSQ13724 837 aa13.35□□□□□ -0.27
CHRNB1-202ENST00000536404 TPD52L1Q16890 204 aaPredicted RBP13.35□□□□□ -0.27
CHRNB1-202ENST00000536404 ZSCAN29Q8IWY8 852 aaPredicted RBP13.35□□□□□ -0.27
CHRNB1-202ENST00000536404 SLF2Q8IX21 1173 aa13.35□□□□□ -0.27
CHRNB1-202ENST00000536404 NEK1Q96PY6 1258 aa13.35□□□□□ -0.27
CHRNB1-202ENST00000536404 ARHGAP39Q9C0H5 1083 aa13.35□□□□□ -0.27
CHRNB1-202ENST00000536404 KCNH4Q9UQ05 1017 aa13.35□□□□□ -0.27
CHRNB1-202ENST00000536404 MORC2Q9Y6X9 1032 aaPredicted RBP13.35□□□□□ -0.27
CHRNB1-202ENST00000536404 GPR75-ASB3A0A0A6YYF3 556 aa13.35□□□□□ -0.27
CHRNB1-202ENST00000536404 POTEFA5A3E0 1075 aa13.35□□□□□ -0.27
CHRNB1-202ENST00000536404 ECM2O94769 699 aaPredicted RBP13.35□□□□□ -0.27
CHRNB1-202ENST00000536404 ARID4AP29374 1257 aaPredicted RBP13.35□□□□□ -0.27
CHRNB1-202ENST00000536404 MCAMP43121 646 aa13.35□□□□□ -0.27
CHRNB1-202ENST00000536404 TNNT3P45378 269 aaPredicted RBP13.35□□□□□ -0.27
CHRNB1-202ENST00000536404 RHBDL3P58872 404 aa13.35□□□□□ -0.27
CHRNB1-202ENST00000536404 RESTQ13127 1097 aa13.35□□□□□ -0.27
CHRNB1-202ENST00000536404 TOB2Q14106 344 aaPredicted RBP13.35□□□□□ -0.27
CHRNB1-202ENST00000536404 TERF2Q15554 542 aa13.35□□□□□ -0.27
CHRNB1-202ENST00000536404 CAMK4Q16566 473 aa13.35□□□□□ -0.27
CHRNB1-202ENST00000536404 CCDC73Q6ZRK6 1079 aa13.35□□□□□ -0.27
CHRNB1-202ENST00000536404 FERMT3Q86UX7 667 aa13.35□□□□□ -0.27
CHRNB1-202ENST00000536404 KRT222Q8N1A0 295 aa13.35□□□□□ -0.27
CHRNB1-202ENST00000536404 NSUN4Q96CB9 384 aaKnown RBP13.35□□□□□ -0.27
CHRNB1-202ENST00000536404 TRIM34Q9BYJ4 488 aa13.35□□□□□ -0.27
CHRNB1-202ENST00000536404 ZCCHC17Q9NP64 241 aaKnown RBP13.35□□□□□ -0.27
CHRNB1-202ENST00000536404 KCND1Q9NSA2 647 aa13.35□□□□□ -0.27
CHRNB1-202ENST00000536404 ANO10Q9NW15 660 aa13.35□□□□□ -0.27
CHRNB1-202ENST00000536404 SPDYE4A6NLX3 237 aa13.34□□□□□ -0.27
CHRNB1-202ENST00000536404 PDHXO00330 501 aa13.34□□□□□ -0.27
CHRNB1-202ENST00000536404 ATP5JP18859 108 aa13.34□□□□□ -0.27
CHRNB1-202ENST00000536404 PSEN1P49768 467 aa13.34□□□□□ -0.27
CHRNB1-202ENST00000536404 ANKRD23Q86SG2 305 aa13.34□□□□□ -0.27
CHRNB1-202ENST00000536404 CKAP2LQ8IYA6 745 aa13.34□□□□□ -0.27
CHRNB1-202ENST00000536404 CEP120Q8N960 986 aa13.34□□□□□ -0.27
CHRNB1-202ENST00000536404 FAM227BQ96M60 508 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms