RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 GOLIM4O00461 696 aa15.68■□□□□ 0.1
TNFRSF1A-207ENST00000535958 STRNO43815 780 aa15.68■□□□□ 0.1
TNFRSF1A-207ENST00000535958 IFIT2P09913 472 aaKnown RBP15.68■□□□□ 0.1
TNFRSF1A-207ENST00000535958 PDE6AP16499 860 aa15.68■□□□□ 0.1
TNFRSF1A-207ENST00000535958 ADORA2AP29274 412 aa15.68■□□□□ 0.1
TNFRSF1A-207ENST00000535958 POTEEQ6S8J3 1075 aa15.68■□□□□ 0.1
TNFRSF1A-207ENST00000535958 SAMD1Q6SPF0 538 aaPredicted RBP15.68■□□□□ 0.1
TNFRSF1A-207ENST00000535958 TMEM179Q6ZVK1 233 aa15.68■□□□□ 0.1
TNFRSF1A-207ENST00000535958 MB21D1Q8N884 522 aa15.68■□□□□ 0.1
TNFRSF1A-207ENST00000535958 NPLOC4Q8TAT6 608 aa15.68■□□□□ 0.1
TNFRSF1A-207ENST00000535958 DDRGK1Q96HY6 314 aa15.68■□□□□ 0.1
TNFRSF1A-207ENST00000535958 SPATC1LQ9H0A9 340 aa15.68■□□□□ 0.1
TNFRSF1A-207ENST00000535958 ATP11BQ9Y2G3 1177 aa15.68■□□□□ 0.1
TNFRSF1A-207ENST00000535958 MYH8P13535 1937 aa15.68■□□□□ 0.1
TNFRSF1A-207ENST00000535958 ZNF532Q9HCE3 1301 aa15.68■□□□□ 0.1
TNFRSF1A-207ENST00000535958 ZNF236Q9UL36 1845 aa15.67■□□□□ 0.1
TNFRSF1A-207ENST00000535958 HMMRO75330 724 aa15.67■□□□□ 0.1
TNFRSF1A-207ENST00000535958 FLOT1O75955 427 aa15.67■□□□□ 0.1
TNFRSF1A-207ENST00000535958 MS4A1P11836 297 aa15.67■□□□□ 0.1
TNFRSF1A-207ENST00000535958 RLBP1P12271 317 aa15.67■□□□□ 0.1
TNFRSF1A-207ENST00000535958 RTP1P59025 263 aa15.67■□□□□ 0.1
TNFRSF1A-207ENST00000535958 OLFML2BQ68BL8 750 aa15.67■□□□□ 0.1
TNFRSF1A-207ENST00000535958 NCAPG2Q86XI2 1143 aa15.67■□□□□ 0.1
TNFRSF1A-207ENST00000535958 RHPN1Q8TCX5 695 aa15.67■□□□□ 0.1
TNFRSF1A-207ENST00000535958 SDR42E1Q8WUS8 393 aa15.67■□□□□ 0.1
TNFRSF1A-207ENST00000535958 MOV10L1Q9BXT6 1211 aaKnown RBP15.67■□□□□ 0.1
TNFRSF1A-207ENST00000535958 PRDM5Q9NQX1 630 aaPredicted RBP15.67■□□□□ 0.1
TNFRSF1A-207ENST00000535958 MTMR10Q9NXD2 777 aa15.67■□□□□ 0.1
TNFRSF1A-207ENST00000535958 CYBAP13498 195 aa15.66■□□□□ 0.1
TNFRSF1A-207ENST00000535958 ERCC3P19447 782 aa15.66■□□□□ 0.1
TNFRSF1A-207ENST00000535958 ICA1Q05084 483 aa15.66■□□□□ 0.1
TNFRSF1A-207ENST00000535958 GABPAQ06546 454 aa15.66■□□□□ 0.1
TNFRSF1A-207ENST00000535958 GJC2Q5T442 439 aaPredicted RBP15.66■□□□□ 0.1
TNFRSF1A-207ENST00000535958 SHCBP1Q8NEM2 672 aa15.66■□□□□ 0.1
TNFRSF1A-207ENST00000535958 KIF1BPQ96EK5 621 aa15.66■□□□□ 0.1
TNFRSF1A-207ENST00000535958 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.66■□□□□ 0.1
TNFRSF1A-207ENST00000535958 MROH8Q9H579 483 aa15.66■□□□□ 0.1
TNFRSF1A-207ENST00000535958 COL6A3P12111 3177 aa15.65■□□□□ 0.1
TNFRSF1A-207ENST00000535958 GUCY1A2P33402 732 aa15.65■□□□□ 0.1
TNFRSF1A-207ENST00000535958 ZNF697Q5TEC3 545 aa15.65■□□□□ 0.1
TNFRSF1A-207ENST00000535958 LCORLQ8N3X6 602 aa15.65■□□□□ 0.1
TNFRSF1A-207ENST00000535958 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.65■□□□□ 0.1
TNFRSF1A-207ENST00000535958 DCP1AQ9NPI6 582 aaPredicted RBP15.65■□□□□ 0.1
TNFRSF1A-207ENST00000535958 A0A0G2JMZ2 1700 aa15.65■□□□□ 0.1
TNFRSF1A-207ENST00000535958 A0A1W2PRG0 241 aa15.64■□□□□ 0.09
TNFRSF1A-207ENST00000535958 SEPT4O43236 478 aa15.64■□□□□ 0.09
TNFRSF1A-207ENST00000535958 DSG3P32926 999 aa15.64■□□□□ 0.09
TNFRSF1A-207ENST00000535958 ANO1Q5XXA6 986 aa15.64■□□□□ 0.09
TNFRSF1A-207ENST00000535958 SPICE1Q8N0Z3 855 aa15.64■□□□□ 0.09
TNFRSF1A-207ENST00000535958 ARMT1Q9H993 441 aa15.64■□□□□ 0.09
TNFRSF1A-207ENST00000535958 RAD21O60216 631 aa15.63■□□□□ 0.09
TNFRSF1A-207ENST00000535958 MBD4O95243 580 aa15.63■□□□□ 0.09
TNFRSF1A-207ENST00000535958 FCER1AP12319 257 aa15.63■□□□□ 0.09
TNFRSF1A-207ENST00000535958 ABRAQ8N0Z2 381 aa15.63■□□□□ 0.09
TNFRSF1A-207ENST00000535958 SLC44A5Q8NCS7 719 aa15.63■□□□□ 0.09
TNFRSF1A-207ENST00000535958 TRPV1Q8NER1 839 aa15.63■□□□□ 0.09
TNFRSF1A-207ENST00000535958 PANK1Q8TE04 598 aa15.63■□□□□ 0.09
TNFRSF1A-207ENST00000535958 ATG4CQ96DT6 458 aa15.63■□□□□ 0.09
TNFRSF1A-207ENST00000535958 FAM161BQ96MY7 647 aa15.63■□□□□ 0.09
TNFRSF1A-207ENST00000535958 VCPKMTQ9H867 229 aa15.63■□□□□ 0.09
TNFRSF1A-207ENST00000535958 PAG1Q9NWQ8 432 aa15.63■□□□□ 0.09
TNFRSF1A-207ENST00000535958 WDR46O15213 610 aaKnown RBP15.62■□□□□ 0.09
TNFRSF1A-207ENST00000535958 SLC25A27O95847 323 aa15.62■□□□□ 0.09
TNFRSF1A-207ENST00000535958 CYP2D6P10635 497 aa15.62■□□□□ 0.09
TNFRSF1A-207ENST00000535958 SLC39A5Q6ZMH5 540 aa15.62■□□□□ 0.09
TNFRSF1A-207ENST00000535958 RPAP2Q8IXW5 612 aaPredicted RBP15.62■□□□□ 0.09
TNFRSF1A-207ENST00000535958 DYNLL2Q96FJ2 89 aa15.62■□□□□ 0.09
TNFRSF1A-207ENST00000535958 CCDC17Q96LX7 622 aa15.62■□□□□ 0.09
TNFRSF1A-207ENST00000535958 GOPCQ9HD26 462 aa15.62■□□□□ 0.09
TNFRSF1A-207ENST00000535958 ATP8A2Q9NTI2 1148 aa15.62■□□□□ 0.09
TNFRSF1A-207ENST00000535958 TMX2Q9Y320 296 aa15.62■□□□□ 0.09
TNFRSF1A-207ENST00000535958 RAB11FIP3O75154 756 aa15.61■□□□□ 0.09
TNFRSF1A-207ENST00000535958 RARBP10826 455 aa15.61■□□□□ 0.09
TNFRSF1A-207ENST00000535958 AKR1B1P15121 316 aa15.61■□□□□ 0.09
TNFRSF1A-207ENST00000535958 EVX2Q03828 476 aa15.61■□□□□ 0.09
TNFRSF1A-207ENST00000535958 KCTD2Q14681 263 aa15.61■□□□□ 0.09
TNFRSF1A-207ENST00000535958 FAM109BQ6ICB4 259 aaPredicted RBP15.61■□□□□ 0.09
TNFRSF1A-207ENST00000535958 CLEC10AQ8IUN9 316 aa15.61■□□□□ 0.09
TNFRSF1A-207ENST00000535958 MAML3Q96JK9 1138 aa15.61■□□□□ 0.09
TNFRSF1A-207ENST00000535958 MMP19Q99542 508 aa15.61■□□□□ 0.09
TNFRSF1A-207ENST00000535958 CHMP4BQ9H444 224 aaKnown RBP15.61■□□□□ 0.09
TNFRSF1A-207ENST00000535958 DDX19BQ9UMR2 479 aa15.61■□□□□ 0.09
TNFRSF1A-207ENST00000535958 LTBP2Q14767 1821 aa15.6■□□□□ 0.09
TNFRSF1A-207ENST00000535958 TCRBV5S4A2TA0A5A2 114 aa15.6■□□□□ 0.09
TNFRSF1A-207ENST00000535958 COBLO75128 1261 aa15.6■□□□□ 0.09
TNFRSF1A-207ENST00000535958 COPB2P35606 906 aa15.6■□□□□ 0.09
TNFRSF1A-207ENST00000535958 ADD2P35612 726 aa15.6■□□□□ 0.09
TNFRSF1A-207ENST00000535958 ADCYAP1R1P41586 468 aa15.6■□□□□ 0.09
TNFRSF1A-207ENST00000535958 TRIM60Q495X7 471 aa15.6■□□□□ 0.09
TNFRSF1A-207ENST00000535958 ZSCAN25Q6NSZ9 544 aa15.6■□□□□ 0.09
TNFRSF1A-207ENST00000535958 RNF180Q86T96 592 aa15.6■□□□□ 0.09
TNFRSF1A-207ENST00000535958 FERMT2Q96AC1 680 aa15.6■□□□□ 0.09
TNFRSF1A-207ENST00000535958 BOLA2Q9H3K6 86 aa15.6■□□□□ 0.09
TNFRSF1A-207ENST00000535958 XPNPEP3Q9NQH7 507 aa15.6■□□□□ 0.09
TNFRSF1A-207ENST00000535958 RLFQ13129 1914 aa15.59■□□□□ 0.09
TNFRSF1A-207ENST00000535958 BAZ2AQ9UIF9 1905 aaKnown RBP15.59■□□□□ 0.09
TNFRSF1A-207ENST00000535958 PRKAB2O43741 272 aa15.59■□□□□ 0.09
TNFRSF1A-207ENST00000535958 CDK8P49336 464 aa15.59■□□□□ 0.09
TNFRSF1A-207ENST00000535958 LRRC41Q15345 812 aa15.59■□□□□ 0.09
TNFRSF1A-207ENST00000535958 FAM47AQ5JRC9 791 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms