RNA–Protein interactions for RNA: ENST00000535789.1

ATL3-202, Transcript of atlastin GTPase 3, humanhuman

TSL 4

Gene ATL3, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-202ENST00000535789 USP17L22D6RA61 530 aa19.59■□□□□ 0.73
ATL3-202ENST00000535789 USP17L17D6RBQ6 530 aa19.59■□□□□ 0.73
ATL3-202ENST00000535789 USP17L19D6RCP7 530 aa19.59■□□□□ 0.73
ATL3-202ENST00000535789 USP17L20D6RJB6 530 aa19.59■□□□□ 0.73
ATL3-202ENST00000535789 PRDM1O75626 825 aa19.59■□□□□ 0.73
ATL3-202ENST00000535789 MYCP01106 439 aaPredicted RBP19.59■□□□□ 0.73
ATL3-202ENST00000535789 EEF2P13639 858 aaKnown RBP19.59■□□□□ 0.73
ATL3-202ENST00000535789 ERVK-9P63128 1117 aa19.59■□□□□ 0.73
ATL3-202ENST00000535789 ERVK-24P63145 666 aa19.59■□□□□ 0.73
ATL3-202ENST00000535789 USP17L24Q0WX57 530 aa19.59■□□□□ 0.73
ATL3-202ENST00000535789 NMIQ13287 307 aaPredicted RBP19.59■□□□□ 0.73
ATL3-202ENST00000535789 LRRFIP1Q32MZ4 808 aaKnown RBP19.59■□□□□ 0.73
ATL3-202ENST00000535789 PAGR1Q9BTK6 254 aa19.59■□□□□ 0.73
ATL3-202ENST00000535789 APPP05067 770 aa19.58■□□□□ 0.72
ATL3-202ENST00000535789 ELNP15502 786 aa19.58■□□□□ 0.72
ATL3-202ENST00000535789 GRK4P32298 578 aa19.58■□□□□ 0.72
ATL3-202ENST00000535789 LBX2Q6XYB7 198 aa19.58■□□□□ 0.72
ATL3-202ENST00000535789 RAET1EQ8TD07 263 aa19.58■□□□□ 0.72
ATL3-202ENST00000535789 VCPKMTQ9H867 229 aa19.58■□□□□ 0.72
ATL3-202ENST00000535789 BTBD7Q9P203 1132 aa19.58■□□□□ 0.72
ATL3-202ENST00000535789 GJD2Q9UKL4 321 aa19.58■□□□□ 0.72
ATL3-202ENST00000535789 HOXD10P28358 340 aa19.57■□□□□ 0.72
ATL3-202ENST00000535789 PPARAQ07869 468 aa19.57■□□□□ 0.72
ATL3-202ENST00000535789 IRF5Q13568 498 aa19.57■□□□□ 0.72
ATL3-202ENST00000535789 SPICE1Q8N0Z3 855 aa19.57■□□□□ 0.72
ATL3-202ENST00000535789 SHISA4Q96DD7 197 aa19.57■□□□□ 0.72
ATL3-202ENST00000535789 HELLSQ9NRZ9 838 aa19.57■□□□□ 0.72
ATL3-202ENST00000535789 TRIM6-TRIM34B2RNG4 842 aa19.56■□□□□ 0.72
ATL3-202ENST00000535789 EN2P19622 333 aaPredicted RBP19.56■□□□□ 0.72
ATL3-202ENST00000535789 GPRC5AQ8NFJ5 357 aa19.56■□□□□ 0.72
ATL3-202ENST00000535789 NAPBQ9H115 298 aa19.56■□□□□ 0.72
ATL3-202ENST00000535789 ARHGEF10LQ9HCE6 1279 aa19.56■□□□□ 0.72
ATL3-202ENST00000535789 INCENPQ9NQS7 918 aa19.56■□□□□ 0.72
ATL3-202ENST00000535789 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.56■□□□□ 0.72
ATL3-202ENST00000535789 SMCHD1A6NHR9 2005 aa19.56■□□□□ 0.72
ATL3-202ENST00000535789 ADCY3O60266 1144 aa19.55■□□□□ 0.72
ATL3-202ENST00000535789 GSPT1P15170 499 aaKnown RBP19.55■□□□□ 0.72
ATL3-202ENST00000535789 CTDSPL2Q05D32 466 aa19.55■□□□□ 0.72
ATL3-202ENST00000535789 SLAIN1Q8ND83 568 aa19.55■□□□□ 0.72
ATL3-202ENST00000535789 RILPL2Q969X0 211 aa19.55■□□□□ 0.72
ATL3-202ENST00000535789 IL25Q9H293 177 aa19.55■□□□□ 0.72
ATL3-202ENST00000535789 KANSL2Q9H9L4 492 aa19.55■□□□□ 0.72
ATL3-202ENST00000535789 SDSP20132 328 aa19.54■□□□□ 0.72
ATL3-202ENST00000535789 MCMDC2Q4G0Z9 681 aa19.54■□□□□ 0.72
ATL3-202ENST00000535789 NBPF11Q86T75 865 aa19.54■□□□□ 0.72
ATL3-202ENST00000535789 NKX2-3Q8TAU0 364 aa19.54■□□□□ 0.72
ATL3-202ENST00000535789 GTF3C2Q8WUA4 911 aaPredicted RBP19.54■□□□□ 0.72
ATL3-202ENST00000535789 LPAR1Q92633 364 aa19.54■□□□□ 0.72
ATL3-202ENST00000535789 COA7Q96BR5 231 aa19.54■□□□□ 0.72
ATL3-202ENST00000535789 TANGO6Q9C0B7 1094 aa19.54■□□□□ 0.72
ATL3-202ENST00000535789 NBPF3Q9H094 633 aa19.54■□□□□ 0.72
ATL3-202ENST00000535789 RABGAP1Q9Y3P9 1069 aa19.54■□□□□ 0.72
ATL3-202ENST00000535789 CCDC171Q6TFL3 1326 aa19.53■□□□□ 0.72
ATL3-202ENST00000535789 LCTP09848 1927 aa19.53■□□□□ 0.72
ATL3-202ENST00000535789 INHAP05111 366 aa19.53■□□□□ 0.72
ATL3-202ENST00000535789 ATP2B2Q01814 1243 aa19.53■□□□□ 0.72
ATL3-202ENST00000535789 TRIM32Q13049 653 aa19.53■□□□□ 0.72
ATL3-202ENST00000535789 GPR142Q7Z601 462 aa19.53■□□□□ 0.72
ATL3-202ENST00000535789 PXYLP1Q8TE99 480 aa19.53■□□□□ 0.72
ATL3-202ENST00000535789 USP6NLQ92738 828 aa19.53■□□□□ 0.72
ATL3-202ENST00000535789 CEP95Q96GE4 821 aa19.53■□□□□ 0.72
ATL3-202ENST00000535789 NACAP1Q9BZK3 213 aa19.53■□□□□ 0.72
ATL3-202ENST00000535789 MKNK2Q9HBH9 465 aa19.53■□□□□ 0.72
ATL3-202ENST00000535789 FBXO28Q9NVF7 368 aa19.53■□□□□ 0.72
ATL3-202ENST00000535789 ZMYM6O95789 1325 aa19.52■□□□□ 0.72
ATL3-202ENST00000535789 WDR46O15213 610 aaKnown RBP19.52■□□□□ 0.72
ATL3-202ENST00000535789 HSPD1P10809 573 aaKnown RBP19.52■□□□□ 0.72
ATL3-202ENST00000535789 CCL5P13501 91 aa19.52■□□□□ 0.72
ATL3-202ENST00000535789 ALX1Q15699 326 aa19.52■□□□□ 0.72
ATL3-202ENST00000535789 FAM47AQ5JRC9 791 aa19.52■□□□□ 0.72
ATL3-202ENST00000535789 MORN1Q5T089 497 aa19.52■□□□□ 0.72
ATL3-202ENST00000535789 TICAM2Q86XR7 235 aa19.52■□□□□ 0.72
ATL3-202ENST00000535789 TRIB2Q92519 343 aa19.52■□□□□ 0.72
ATL3-202ENST00000535789 ATG4CQ96DT6 458 aa19.52■□□□□ 0.72
ATL3-202ENST00000535789 NUP88Q99567 741 aaPredicted RBP19.52■□□□□ 0.72
ATL3-202ENST00000535789 UNC93B1Q9H1C4 597 aa19.52■□□□□ 0.72
ATL3-202ENST00000535789 SH2D4AQ9H788 454 aa19.52■□□□□ 0.72
ATL3-202ENST00000535789 PPP4R2Q9NY27 417 aa19.52■□□□□ 0.72
ATL3-202ENST00000535789 NYAP2Q9P242 653 aa19.52■□□□□ 0.72
ATL3-202ENST00000535789 ANAPC4Q9UJX5 808 aa19.52■□□□□ 0.72
ATL3-202ENST00000535789 MCM3APO60318 1980 aa19.52■□□□□ 0.71
ATL3-202ENST00000535789 FGAP02671 866 aa19.51■□□□□ 0.71
ATL3-202ENST00000535789 DSG3P32926 999 aa19.51■□□□□ 0.71
ATL3-202ENST00000535789 TTC22Q5TAA0 569 aa19.51■□□□□ 0.71
ATL3-202ENST00000535789 FLOT1O75955 427 aa19.5■□□□□ 0.71
ATL3-202ENST00000535789 MAPK4P31152 587 aa19.5■□□□□ 0.71
ATL3-202ENST00000535789 COG2Q14746 738 aa19.5■□□□□ 0.71
ATL3-202ENST00000535789 FAM83BQ5T0W9 1011 aa19.5■□□□□ 0.71
ATL3-202ENST00000535789 RASGRP2Q7LDG7 609 aa19.5■□□□□ 0.71
ATL3-202ENST00000535789 NEDD1Q8NHV4 660 aa19.5■□□□□ 0.71
ATL3-202ENST00000535789 MTMR4Q9NYA4 1195 aa19.5■□□□□ 0.71
ATL3-202ENST00000535789 NMT2O60551 498 aa19.49■□□□□ 0.71
ATL3-202ENST00000535789 NDUFB10O96000 172 aa19.49■□□□□ 0.71
ATL3-202ENST00000535789 FGRP09769 529 aa19.49■□□□□ 0.71
ATL3-202ENST00000535789 CYP2B6P20813 491 aa19.49■□□□□ 0.71
ATL3-202ENST00000535789 CCL14Q16627 93 aa19.49■□□□□ 0.71
ATL3-202ENST00000535789 LRRC47Q8N1G4 583 aaKnown RBP19.49■□□□□ 0.71
ATL3-202ENST00000535789 REPS2Q8NFH8 660 aa19.49■□□□□ 0.71
ATL3-202ENST00000535789 TMEM106CQ9BVX2 250 aa19.49■□□□□ 0.71
ATL3-202ENST00000535789 MOV10L1Q9BXT6 1211 aaKnown RBP19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms