RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 RNF41Q9H4P4 317 aaPredicted RBP26.92■■□□□ 1.9
SFSWAP-204ENST00000535399 RPAP3Q9H6T3 665 aaPredicted RBP26.92■■□□□ 1.9
SFSWAP-204ENST00000535399 RRP12Q5JTH9 1297 aaKnown RBP26.91■■□□□ 1.9
SFSWAP-204ENST00000535399 MFSD6Q6ZSS7 791 aa26.91■■□□□ 1.9
SFSWAP-204ENST00000535399 NKX2-3Q8TAU0 364 aa26.91■■□□□ 1.9
SFSWAP-204ENST00000535399 MKL1Q969V6 931 aa26.91■■□□□ 1.9
SFSWAP-204ENST00000535399 IL17RBQ9NRM6 502 aa26.91■■□□□ 1.9
SFSWAP-204ENST00000535399 TOMM22Q9NS69 142 aa26.91■■□□□ 1.9
SFSWAP-204ENST00000535399 CLIP2Q9UDT6 1046 aa26.91■■□□□ 1.9
SFSWAP-204ENST00000535399 CDC45O75419 566 aa26.9■■□□□ 1.9
SFSWAP-204ENST00000535399 GCLCP48506 637 aaPredicted RBP26.9■■□□□ 1.9
SFSWAP-204ENST00000535399 HERVK_113P62684 666 aa26.9■■□□□ 1.9
SFSWAP-204ENST00000535399 LACTBP83111 547 aaPredicted RBP26.9■■□□□ 1.9
SFSWAP-204ENST00000535399 SPICE1Q8N0Z3 855 aa26.9■■□□□ 1.9
SFSWAP-204ENST00000535399 U3KPZ7 1027 aaPredicted RBP26.9■■□□□ 1.9
SFSWAP-204ENST00000535399 NEDD4P46934 1319 aa26.9■■□□□ 1.9
SFSWAP-204ENST00000535399 TTLL1O95922 423 aa26.89■■□□□ 1.9
SFSWAP-204ENST00000535399 POTEEQ6S8J3 1075 aa26.89■■□□□ 1.9
SFSWAP-204ENST00000535399 TNS4Q8IZW8 715 aa26.89■■□□□ 1.9
SFSWAP-204ENST00000535399 ANKRD13CQ8N6S4 541 aa26.89■■□□□ 1.9
SFSWAP-204ENST00000535399 MAP4K1Q92918 833 aa26.89■■□□□ 1.9
SFSWAP-204ENST00000535399 ARHGAP39Q9C0H5 1083 aa26.89■■□□□ 1.9
SFSWAP-204ENST00000535399 NMT2O60551 498 aa26.88■■□□□ 1.89
SFSWAP-204ENST00000535399 NOVP48745 357 aa26.88■■□□□ 1.89
SFSWAP-204ENST00000535399 OTOP1Q7RTM1 612 aa26.88■■□□□ 1.89
SFSWAP-204ENST00000535399 MCOLN1Q9GZU1 580 aa26.88■■□□□ 1.89
SFSWAP-204ENST00000535399 LSG1Q9H089 658 aaKnown RBP26.88■■□□□ 1.89
SFSWAP-204ENST00000535399 GOPCQ9HD26 462 aa26.88■■□□□ 1.89
SFSWAP-204ENST00000535399 SYNPO2Q9UMS6 1093 aa26.88■■□□□ 1.89
SFSWAP-204ENST00000535399 WDR46O15213 610 aaKnown RBP26.87■■□□□ 1.89
SFSWAP-204ENST00000535399 CTGFP29279 349 aa26.87■■□□□ 1.89
SFSWAP-204ENST00000535399 FAM110CQ1W6H9 321 aa26.87■■□□□ 1.89
SFSWAP-204ENST00000535399 TRIM17Q9Y577 477 aa26.87■■□□□ 1.89
SFSWAP-204ENST00000535399 F5H6K3 240 aa26.86■■□□□ 1.89
SFSWAP-204ENST00000535399 NDUFB10O96000 172 aa26.86■■□□□ 1.89
SFSWAP-204ENST00000535399 KLRC3Q07444 240 aa26.86■■□□□ 1.89
SFSWAP-204ENST00000535399 PPP4R3BQ5MIZ7 849 aa26.86■■□□□ 1.89
SFSWAP-204ENST00000535399 KIAA1211Q6ZU35 1233 aa26.86■■□□□ 1.89
SFSWAP-204ENST00000535399 LRRC47Q8N1G4 583 aaKnown RBP26.86■■□□□ 1.89
SFSWAP-204ENST00000535399 TANGO6Q9C0B7 1094 aa26.86■■□□□ 1.89
SFSWAP-204ENST00000535399 EFCC1Q9HA90 598 aa26.86■■□□□ 1.89
SFSWAP-204ENST00000535399 TXNRD2Q9NNW7 524 aa26.86■■□□□ 1.89
SFSWAP-204ENST00000535399 TCP11L1Q9NUJ3 509 aa26.86■■□□□ 1.89
SFSWAP-204ENST00000535399 MORF4L1Q9UBU8 362 aa26.86■■□□□ 1.89
SFSWAP-204ENST00000535399 RBM8AQ9Y5S9 174 aaKnown RBP26.86■■□□□ 1.89
SFSWAP-204ENST00000535399 CYP21A2P08686 494 aa26.85■■□□□ 1.89
SFSWAP-204ENST00000535399 NT5C2P49902 561 aa26.85■■□□□ 1.89
SFSWAP-204ENST00000535399 KIF22Q14807 665 aa26.85■■□□□ 1.89
SFSWAP-204ENST00000535399 GTF3C2Q8WUA4 911 aaPredicted RBP26.85■■□□□ 1.89
SFSWAP-204ENST00000535399 ESR2Q92731 530 aa26.85■■□□□ 1.89
SFSWAP-204ENST00000535399 RBPJLQ9UBG7 517 aa26.85■■□□□ 1.89
SFSWAP-204ENST00000535399 LAMA4Q16363 1823 aa26.84■■□□□ 1.89
SFSWAP-204ENST00000535399 SPDYE16A6NNV3 312 aaPredicted RBP26.84■■□□□ 1.89
SFSWAP-204ENST00000535399 PEX10O60683 326 aa26.84■■□□□ 1.89
SFSWAP-204ENST00000535399 PSMC4P43686 418 aa26.84■■□□□ 1.89
SFSWAP-204ENST00000535399 PKN2Q16513 984 aaKnown RBP26.84■■□□□ 1.89
SFSWAP-204ENST00000535399 CASC1Q6TDU7 716 aa26.84■■□□□ 1.89
SFSWAP-204ENST00000535399 LBX2Q6XYB7 198 aa26.84■■□□□ 1.89
SFSWAP-204ENST00000535399 GMCL1P1Q8NEA9 526 aa26.84■■□□□ 1.89
SFSWAP-204ENST00000535399 TRIM47Q96LD4 638 aa26.84■■□□□ 1.89
SFSWAP-204ENST00000535399 STX8Q9UNK0 236 aa26.84■■□□□ 1.89
SFSWAP-204ENST00000535399 B4E1Z4 1266 aa26.83■■□□□ 1.89
SFSWAP-204ENST00000535399 RAD21O60216 631 aa26.83■■□□□ 1.89
SFSWAP-204ENST00000535399 ECM2O94769 699 aaPredicted RBP26.83■■□□□ 1.89
SFSWAP-204ENST00000535399 COG2Q14746 738 aa26.83■■□□□ 1.89
SFSWAP-204ENST00000535399 ARHGEF6Q15052 776 aa26.83■■□□□ 1.89
SFSWAP-204ENST00000535399 NUP88Q99567 741 aaPredicted RBP26.83■■□□□ 1.89
SFSWAP-204ENST00000535399 ANO2Q9NQ90 1003 aa26.83■■□□□ 1.89
SFSWAP-204ENST00000535399 TAF6LQ9Y6J9 622 aa26.83■■□□□ 1.89
SFSWAP-204ENST00000535399 KDM4AO75164 1064 aa26.82■■□□□ 1.88
SFSWAP-204ENST00000535399 CNMDO75829 334 aa26.82■■□□□ 1.88
SFSWAP-204ENST00000535399 FAM83BQ5T0W9 1011 aa26.82■■□□□ 1.88
SFSWAP-204ENST00000535399 HOXC10Q9NYD6 342 aa26.82■■□□□ 1.88
SFSWAP-204ENST00000535399 FLOT1O75955 427 aa26.81■■□□□ 1.88
SFSWAP-204ENST00000535399 GPRC5AQ8NFJ5 357 aa26.81■■□□□ 1.88
SFSWAP-204ENST00000535399 KRT23Q9C075 422 aa26.81■■□□□ 1.88
SFSWAP-204ENST00000535399 CNNM2Q9H8M5 875 aa26.81■■□□□ 1.88
SFSWAP-204ENST00000535399 RABGAP1Q9Y3P9 1069 aa26.81■■□□□ 1.88
SFSWAP-204ENST00000535399 FMNL1O95466 1100 aaPredicted RBP26.8■■□□□ 1.88
SFSWAP-204ENST00000535399 DSG3P32926 999 aa26.8■■□□□ 1.88
SFSWAP-204ENST00000535399 FCGRTP55899 365 aa26.8■■□□□ 1.88
SFSWAP-204ENST00000535399 ERVK-9P63128 1117 aa26.8■■□□□ 1.88
SFSWAP-204ENST00000535399 ERVK-24P63145 666 aa26.8■■□□□ 1.88
SFSWAP-204ENST00000535399 Q3C1V9 767 aa26.8■■□□□ 1.88
SFSWAP-204ENST00000535399 SLFN13Q68D06 897 aa26.8■■□□□ 1.88
SFSWAP-204ENST00000535399 RCSD1Q6JBY9 416 aa26.8■■□□□ 1.88
SFSWAP-204ENST00000535399 FBXO46Q6PJ61 603 aaPredicted RBP26.8■■□□□ 1.88
SFSWAP-204ENST00000535399 PAGR1Q9BTK6 254 aa26.8■■□□□ 1.88
SFSWAP-204ENST00000535399 FBXO28Q9NVF7 368 aa26.8■■□□□ 1.88
SFSWAP-204ENST00000535399 ZSWIM5Q9P217 1185 aa26.8■■□□□ 1.88
SFSWAP-204ENST00000535399 MYPNQ86TC9 1320 aa26.8■■□□□ 1.88
SFSWAP-204ENST00000535399 GNRH1P01148 92 aa26.79■■□□□ 1.88
SFSWAP-204ENST00000535399 STOX1Q6ZVD7 989 aa26.79■■□□□ 1.88
SFSWAP-204ENST00000535399 BTBD7Q9P203 1132 aa26.79■■□□□ 1.88
SFSWAP-204ENST00000535399 PTPN22Q9Y2R2 807 aa26.79■■□□□ 1.88
SFSWAP-204ENST00000535399 TOP1P11387 765 aaKnown RBP26.78■■□□□ 1.88
SFSWAP-204ENST00000535399 NECTIN1Q15223 517 aa26.78■■□□□ 1.88
SFSWAP-204ENST00000535399 ATG4CQ96DT6 458 aa26.78■■□□□ 1.88
SFSWAP-204ENST00000535399 TTC14Q96N46 770 aa26.78■■□□□ 1.88
SFSWAP-204ENST00000535399 TMEM47Q9BQJ4 181 aa26.78■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms